mRNA_H-elongata_contig145765.3128.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig145765.3128.1 vs. uniprot
Match: A0A8F0FAK8_9PHAE (AAA domain-containing protein n=1 Tax=Desmarestia aculeata TaxID=62298 RepID=A0A8F0FAK8_9PHAE) HSP 1 Score: 481 bits (1237), Expect = 1.310e-167 Identity = 244/246 (99.19%), Postives = 245/246 (99.59%), Query Frame = 1
Query: 1 TEIFTEKAVNYGLVTPKGVLIIGMQGSGKSLIAKAVAFEWQLPLLRLDVGRLFAGVVGESESRVREMIGIAESLAPCVLWVDEIDKAFTDSEQNFDSGTTTRVLATFVTWLGEKTLPVFVIATANDIFSLPVEILRKGRFDEIFFLGIPTEKERQLIYEVHLKRFRPDTWETYDSKRLSERARKFSGAEIEQTIIDAMYVAFSENREFTTNDVLIAIKETVPILDIAPQRTRLIQNWATSGRIRLA 738
TEIFTEKAVNYGLVTPKGVLIIGMQGSGKSLIAKAVAFEWQLPLLRLDVGRLFAGVVGESESRVREMIGIAESLAPCVLWVDEIDKAFTDSEQNFDSGTTTRVLATFVTWLGEKT+PVFVIATANDIFSLPVEILRKGRFDEIFFLGIPTEKERQLIYEVHLKRFRPDTWETYDSKRLSERARKFSGAEIEQTIIDAMYVAFSENREFTTNDVLIAIKETVPILDI PQRTRLIQNWATSGRIRLA
Sbjct: 248 TEIFTEKAVNYGLVTPKGVLIIGMQGSGKSLIAKAVAFEWQLPLLRLDVGRLFAGVVGESESRVREMIGIAESLAPCVLWVDEIDKAFTDSEQNFDSGTTTRVLATFVTWLGEKTVPVFVIATANDIFSLPVEILRKGRFDEIFFLGIPTEKERQLIYEVHLKRFRPDTWETYDSKRLSERARKFSGAEIEQTIIDAMYVAFSENREFTTNDVLIAIKETVPILDIDPQRTRLIQNWATSGRIRLA 493
BLAST of mRNA_H-elongata_contig145765.3128.1 vs. uniprot
Match: A0A0S0GAM3_COSCS (Ycf46 n=28 Tax=Laminariales TaxID=2886 RepID=A0A0S0GAM3_COSCS) HSP 1 Score: 444 bits (1141), Expect = 4.600e-153 Identity = 220/246 (89.43%), Postives = 238/246 (96.75%), Query Frame = 1
Query: 1 TEIFTEKAVNYGLVTPKGVLIIGMQGSGKSLIAKAVAFEWQLPLLRLDVGRLFAGVVGESESRVREMIGIAESLAPCVLWVDEIDKAFTDSEQNFDSGTTTRVLATFVTWLGEKTLPVFVIATANDIFSLPVEILRKGRFDEIFFLGIPTEKERQLIYEVHLKRFRPDTWETYDSKRLSERARKFSGAEIEQTIIDAMYVAFSENREFTTNDVLIAIKETVPILDIAPQRTRLIQNWATSGRIRLA 738
TEIF+E+A+NYGLVTPKGVLIIGMQGSGKSLIAK+VA+EW+LPLLRLDVGRLFAGVVGESESRVREMI IAESLAPCVLWVDEIDKAF+DSEQNFDSGTTTRVLATFVTWLGEKTLPVFVIATANDI+SLPVEILRKGRFDEIFFLGIPT ER+LIYEVHL+RFRP+TW+TYDSK+LS+RARKFSGAEIEQTIIDAMYVAFSE REFTTND+LIAIKET+PILDI P RT LIQNWA SG+IR+A
Sbjct: 246 TEIFSEQALNYGLVTPKGVLIIGMQGSGKSLIAKSVAYEWKLPLLRLDVGRLFAGVVGESESRVREMIAIAESLAPCVLWVDEIDKAFSDSEQNFDSGTTTRVLATFVTWLGEKTLPVFVIATANDIYSLPVEILRKGRFDEIFFLGIPTVDERKLIYEVHLRRFRPETWQTYDSKKLSKRARKFSGAEIEQTIIDAMYVAFSEQREFTTNDILIAIKETIPILDIDPLRTELIQNWAASGKIRVA 491
BLAST of mRNA_H-elongata_contig145765.3128.1 vs. uniprot
Match: A0A2R4QPR8_9PHAE (AAA domain-containing protein n=15 Tax=Fucales TaxID=3009 RepID=A0A2R4QPR8_9PHAE) HSP 1 Score: 418 bits (1074), Expect = 6.710e-143 Identity = 201/246 (81.71%), Postives = 232/246 (94.31%), Query Frame = 1
Query: 1 TEIFTEKAVNYGLVTPKGVLIIGMQGSGKSLIAKAVAFEWQLPLLRLDVGRLFAGVVGESESRVREMIGIAESLAPCVLWVDEIDKAFTDSEQNFDSGTTTRVLATFVTWLGEKTLPVFVIATANDIFSLPVEILRKGRFDEIFFLGIPTEKERQLIYEVHLKRFRPDTWETYDSKRLSERARKFSGAEIEQTIIDAMYVAFSENREFTTNDVLIAIKETVPILDIAPQRTRLIQNWATSGRIRLA 738
T+IF+E+A+NYGLVTPKG+L+IGMQGSGKSLI+KA+A+EW+LPLLRLDVGRLF G+VGESESRVREMI I ESLAPCVLWVDEIDKAF+DSEQN D+GTT RVLATF+TWLGEKTL VFVIATANDI+SLP+EILRKGRFDEIFFLGIPT ER++IYE+HLKRFRPDTW YD K LS++ARKFSGAEIEQTIIDAMYVAFSE+REFTTND+L+AIKET+PIL++ P RT++IQNWA+SGRIR+A
Sbjct: 246 TDIFSEEAINYGLVTPKGLLLIGMQGSGKSLISKAIAYEWKLPLLRLDVGRLFGGIVGESESRVREMISITESLAPCVLWVDEIDKAFSDSEQNSDNGTTNRVLATFLTWLGEKTLSVFVIATANDIYSLPLEILRKGRFDEIFFLGIPTIDERKMIYEIHLKRFRPDTWHKYDIKTLSKKARKFSGAEIEQTIIDAMYVAFSEHREFTTNDILVAIKETIPILEMDPLRTQMIQNWASSGRIRVA 491
BLAST of mRNA_H-elongata_contig145765.3128.1 vs. uniprot
Match: UPI001FA7AF61 (hypothetical protein Ycf46 n=1 Tax=Silvetia siliquosa TaxID=93837 RepID=UPI001FA7AF61) HSP 1 Score: 415 bits (1067), Expect = 7.730e-142 Identity = 200/246 (81.30%), Postives = 230/246 (93.50%), Query Frame = 1
Query: 1 TEIFTEKAVNYGLVTPKGVLIIGMQGSGKSLIAKAVAFEWQLPLLRLDVGRLFAGVVGESESRVREMIGIAESLAPCVLWVDEIDKAFTDSEQNFDSGTTTRVLATFVTWLGEKTLPVFVIATANDIFSLPVEILRKGRFDEIFFLGIPTEKERQLIYEVHLKRFRPDTWETYDSKRLSERARKFSGAEIEQTIIDAMYVAFSENREFTTNDVLIAIKETVPILDIAPQRTRLIQNWATSGRIRLA 738
T IF+E+A+NYGLVTPKG+L+IGMQGSGKSLI+KA+A+EW+LPLLRLDVGRLF G+VGESE RVREMI I ESLAPCVLWVDEIDKAF+DSEQN D+GTT RVLATF+TWLGEKTL VFVIATANDI+SLP+EILRKGRFDEIFFLGIPT ER++IYE+HLKRFRPDTW YD K LS++ARKFSGAEIEQTIIDAMYVAFSE+REFTTND+L+AIKET+PIL++ P RT++IQNWA+SGRIR+A
Sbjct: 246 TNIFSEEAINYGLVTPKGLLLIGMQGSGKSLISKAIAYEWKLPLLRLDVGRLFGGIVGESECRVREMISITESLAPCVLWVDEIDKAFSDSEQNSDNGTTNRVLATFLTWLGEKTLSVFVIATANDIYSLPLEILRKGRFDEIFFLGIPTIDERKMIYEIHLKRFRPDTWHKYDIKTLSKKARKFSGAEIEQTIIDAMYVAFSEHREFTTNDILVAIKETIPILEMDPLRTQMIQNWASSGRIRVA 491
BLAST of mRNA_H-elongata_contig145765.3128.1 vs. uniprot
Match: A0A8E6D2J5_9PHAE (AAA domain-containing protein n=1 Tax=Ishige okamurae TaxID=233772 RepID=A0A8E6D2J5_9PHAE) HSP 1 Score: 393 bits (1010), Expect = 3.360e-133 Identity = 187/246 (76.02%), Postives = 222/246 (90.24%), Query Frame = 1
Query: 1 TEIFTEKAVNYGLVTPKGVLIIGMQGSGKSLIAKAVAFEWQLPLLRLDVGRLFAGVVGESESRVREMIGIAESLAPCVLWVDEIDKAFTDSEQNFDSGTTTRVLATFVTWLGEKTLPVFVIATANDIFSLPVEILRKGRFDEIFFLGIPTEKERQLIYEVHLKRFRPDTWETYDSKRLSERARKFSGAEIEQTIIDAMYVAFSENREFTTNDVLIAIKETVPILDIAPQRTRLIQNWATSGRIRLA 738
T F+EKA+NYGL TPKG+L+IG+QGSGKSLIAKAV++EW+LPLLRLDVGRLF GVVGESE RVREMI IAESLAPCVLW+DEIDKAF DSEQN DSGTT RVL T +TWL EKTLPVFVIATANDI+SLP+EILRKGRFDEIFF+GIP +++R++I+EVHLK+FRPDTW YD++RLS+++R+FSGAEIEQ I+DAMY AF+E REFTTND+L A+ TVPIL+I P RT +IQNWA+SG+IR+A
Sbjct: 246 TNSFSEKAINYGLATPKGILLIGVQGSGKSLIAKAVSYEWKLPLLRLDVGRLFGGVVGESEFRVREMIMIAESLAPCVLWIDEIDKAFADSEQNSDSGTTNRVLGTLITWLAEKTLPVFVIATANDIYSLPIEILRKGRFDEIFFIGIPDKEDRRIIFEVHLKKFRPDTWYKYDTRRLSKQSRRFSGAEIEQAIVDAMYAAFNEKREFTTNDILKALARTVPILEIDPVRTDIIQNWASSGKIRMA 491
BLAST of mRNA_H-elongata_contig145765.3128.1 vs. uniprot
Match: A0A2I4Q2W2_9PHAE (AAA domain-containing protein n=1 Tax=Dictyopteris divaricata TaxID=156996 RepID=A0A2I4Q2W2_9PHAE) HSP 1 Score: 390 bits (1002), Expect = 5.480e-132 Identity = 191/245 (77.96%), Postives = 217/245 (88.57%), Query Frame = 1
Query: 4 EIFTEKAVNYGLVTPKGVLIIGMQGSGKSLIAKAVAFEWQLPLLRLDVGRLFAGVVGESESRVREMIGIAESLAPCVLWVDEIDKAFTDSEQNFDSGTTTRVLATFVTWLGEKTLPVFVIATANDIFSLPVEILRKGRFDEIFFLGIPTEKERQLIYEVHLKRFRPDTWETYDSKRLSERARKFSGAEIEQTIIDAMYVAFSENREFTTNDVLIAIKETVPILDIAPQRTRLIQNWATSGRIRLA 738
+ F+E+A+NYGL+TPKGVL+IGMQGSGKSLIAKAVA+EW+LPLLRLDVGRLF G+VGESESRVR+MI IAESLAPCVLWVDEIDKAF++SEQN D GTT RVL+TF+TWL EKT PVFVIATANDI LPVEILRKGRFDEIFFLGIP +ER I+EVHLKRFRPDTW +D ++L + +FSGAEIEQTIIDAMY AFSE REFTTND+L+AI +TVPILDI P RT LIQ+W +SGRIRLA
Sbjct: 247 DTFSEQALNYGLITPKGVLLIGMQGSGKSLIAKAVAYEWRLPLLRLDVGRLFGGLVGESESRVRQMIIIAESLAPCVLWVDEIDKAFSESEQNLDGGTTNRVLSTFITWLSEKTCPVFVIATANDIHCLPVEILRKGRFDEIFFLGIPDLRERHTIFEVHLKRFRPDTWYKFDIQKLGLNSHRFSGAEIEQTIIDAMYYAFSEKREFTTNDILLAINQTVPILDIDPMRTELIQSWTSSGRIRLA 491
BLAST of mRNA_H-elongata_contig145765.3128.1 vs. uniprot
Match: A0A8F0F738_9PHAE (AAA domain-containing protein n=1 Tax=Protohalopteris sp. TaxID=2843287 RepID=A0A8F0F738_9PHAE) HSP 1 Score: 363 bits (932), Expect = 2.160e-121 Identity = 169/245 (68.98%), Postives = 215/245 (87.76%), Query Frame = 1
Query: 4 EIFTEKAVNYGLVTPKGVLIIGMQGSGKSLIAKAVAFEWQLPLLRLDVGRLFAGVVGESESRVREMIGIAESLAPCVLWVDEIDKAFTDSEQNFDSGTTTRVLATFVTWLGEKTLPVFVIATANDIFSLPVEILRKGRFDEIFFLGIPTEKERQLIYEVHLKRFRPDTWETYDSKRLSERARKFSGAEIEQTIIDAMYVAFSENREFTTNDVLIAIKETVPILDIAPQRTRLIQNWATSGRIRLA 738
+ F+E+A+NYGL+ P+GVLIIG+QGSGKSLIAKAVA+EW+LPLLRLD+GRLF G+VG+SE++VR+MI I ESL+PC+LW+DE+DKAF+++ + DSGTT RVL+T + WLGEKTLPVFVI TANDI LPVEILRKGRFDEIFFLGIP ER +I+E+HLKRFRP +W +Y+ K+LSE+ + FSGAEIEQ I++AMYVAFSE REFTT D+L+A+++TVP++DI P RT LI++WA SG+IRLA
Sbjct: 247 DTFSEQAINYGLIPPRGVLIIGIQGSGKSLIAKAVAYEWKLPLLRLDIGRLFGGIVGQSETQVRKMITITESLSPCILWIDEMDKAFSENNPSVDSGTTKRVLSTLIHWLGEKTLPVFVIGTANDIHCLPVEILRKGRFDEIFFLGIPKYDERLIIFELHLKRFRPQSWNSYNIKKLSEKTQNFSGAEIEQAILEAMYVAFSEQREFTTEDILLAVRQTVPLVDIDPLRTELIESWAYSGKIRLA 491
BLAST of mRNA_H-elongata_contig145765.3128.1 vs. uniprot
Match: A0A6B7EV24_9PHAE (AAA domain-containing protein n=1 Tax=Cladosiphon okamuranus TaxID=309737 RepID=A0A6B7EV24_9PHAE) HSP 1 Score: 361 bits (926), Expect = 1.750e-120 Identity = 169/245 (68.98%), Postives = 208/245 (84.90%), Query Frame = 1
Query: 4 EIFTEKAVNYGLVTPKGVLIIGMQGSGKSLIAKAVAFEWQLPLLRLDVGRLFAGVVGESESRVREMIGIAESLAPCVLWVDEIDKAFTDSEQNFDSGTTTRVLATFVTWLGEKTLPVFVIATANDIFSLPVEILRKGRFDEIFFLGIPTEKERQLIYEVHLKRFRPDTWETYDSKRLSERARKFSGAEIEQTIIDAMYVAFSENREFTTNDVLIAIKETVPILDIAPQRTRLIQNWATSGRIRLA 738
EIFTEKAVNYGLV P+G+L++G +G+GKSL+AKA+A+EW LPLLRLD+GRLFAGVVGESESR REMI I ESLAPC LW+DEIDK F DSE + D GTT RVL T TWL EK +PVFVIATANDI LP+EI+RKGRFDEIF L IP ++R +I+E+HL+RFRP TW+TYD+K+LS+ KFSGAEIEQTII+AMYVAF+E+REF TND+L+AIK+TVP+ I P R +++ W++SGR+R+A
Sbjct: 247 EIFTEKAVNYGLVAPRGLLLVGSEGTGKSLLAKAIAYEWNLPLLRLDIGRLFAGVVGESESRTREMIRITESLAPCALWIDEIDKTFADSEMSLDGGTTLRVLGTLATWLAEKKVPVFVIATANDIHLLPLEIVRKGRFDEIFHLTIPNREDRIVIFEIHLRRFRPQTWKTYDTKKLSKATNKFSGAEIEQTIIEAMYVAFTEDREFNTNDILLAIKKTVPMTRIDPLRAEVVEGWSSSGRLRMA 491
BLAST of mRNA_H-elongata_contig145765.3128.1 vs. uniprot
Match: A0A6G6D7R3_ECTSI (AAA domain-containing protein n=9 Tax=Ectocarpales TaxID=2877 RepID=A0A6G6D7R3_ECTSI) HSP 1 Score: 360 bits (923), Expect = 4.960e-120 Identity = 165/246 (67.07%), Postives = 211/246 (85.77%), Query Frame = 1
Query: 1 TEIFTEKAVNYGLVTPKGVLIIGMQGSGKSLIAKAVAFEWQLPLLRLDVGRLFAGVVGESESRVREMIGIAESLAPCVLWVDEIDKAFTDSEQNFDSGTTTRVLATFVTWLGEKTLPVFVIATANDIFSLPVEILRKGRFDEIFFLGIPTEKERQLIYEVHLKRFRPDTWETYDSKRLSERARKFSGAEIEQTIIDAMYVAFSENREFTTNDVLIAIKETVPILDIAPQRTRLIQNWATSGRIRLA 738
+EIF+EKA+NYGLV P+G+L+IG +G+GKSL+AKA+A+EW+LPLLRLD+GRLFAGVVGESESR REMI I ESLAPC LW+DE+DK F DSE + D GTT RVL T TWL EK +PVFVIATAND+ LP+EI+RKGRFDEIF L IP+ ++R LI+E+HL+RFRP TW+TYD+K+LS+ + KFSGAEIEQTII+AMY AF+E REFTTND+L+A+++TVP+ I P R +++ W++SGR+R+A
Sbjct: 246 SEIFSEKAINYGLVAPRGLLLIGSEGTGKSLLAKAIAYEWKLPLLRLDIGRLFAGVVGESESRTREMIRITESLAPCALWIDEMDKTFADSEMSLDGGTTLRVLGTLATWLAEKKVPVFVIATANDLHLLPLEIVRKGRFDEIFHLNIPSREDRVLIFEIHLRRFRPQTWKTYDTKKLSKASNKFSGAEIEQTIIEAMYAAFTEKREFTTNDILLAVRKTVPMTRIDPLRAEVVEGWSSSGRLRMA 491
BLAST of mRNA_H-elongata_contig145765.3128.1 vs. uniprot
Match: A0A7S6U9T6_9STRA (Ycf46 n=1 Tax=Schizocladia ischiensis TaxID=196139 RepID=A0A7S6U9T6_9STRA) HSP 1 Score: 343 bits (881), Expect = 1.110e-113 Identity = 162/243 (66.67%), Postives = 203/243 (83.54%), Query Frame = 1
Query: 10 FTEKAVNYGLVTPKGVLIIGMQGSGKSLIAKAVAFEWQLPLLRLDVGRLFAGVVGESESRVREMIGIAESLAPCVLWVDEIDKAFTDSEQNFDSGTTTRVLATFVTWLGEKTLPVFVIATANDIFSLPVEILRKGRFDEIFFLGIPTEKERQLIYEVHLKRFRPDTWETYDSKRLSERARKFSGAEIEQTIIDAMYVAFSENREFTTNDVLIAIKETVPILDIAPQRTRLIQNWATSGRIRLA 738
F+E A NYGL P+GVL+IG+QGSGKSL+AK VA EW+LPLLRLDVGRLF G++GESESRVR+MI IAESLAPC+LWVDEIDKAF +S Q+ D+GTT+RVL TF+TWL EK +PVFVIATAN+I+ LPVEILRKGRFDEIFF+G+P +ER++I++VHL R RP+TW Y+ LS + FSGAEIEQ+I +AM+ AFS+ REFTT D+ AIK+T+P++ I P+R ++Q WA SGRIR+A
Sbjct: 249 FSELATNYGLAIPRGVLLIGIQGSGKSLVAKGVAAEWKLPLLRLDVGRLFGGIMGESESRVRQMISIAESLAPCILWVDEIDKAFAESTQSMDNGTTSRVLGTFLTWLAEKEVPVFVIATANNIYMLPVEILRKGRFDEIFFIGLPNREERRMIFKVHLSRLRPETWSKYNLDLLSRQTNDFSGAEIEQSITEAMHTAFSQKREFTTTDISKAIKQTIPLVRIDPERLDMVQEWAYSGRIRIA 491 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig145765.3128.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig145765.3128.1 >prot_H-elongata_contig145765.3128.1 ID=prot_H-elongata_contig145765.3128.1|Name=mRNA_H-elongata_contig145765.3128.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=247bp TEIFTEKAVNYGLVTPKGVLIIGMQGSGKSLIAKAVAFEWQLPLLRLDVGback to top mRNA from alignment at H-elongata_contig145765:2..742+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig145765.3128.1 ID=mRNA_H-elongata_contig145765.3128.1|Name=mRNA_H-elongata_contig145765.3128.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=741bp|location=Sequence derived from alignment at H-elongata_contig145765:2..742+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig145765:2..742+ >mRNA_H-elongata_contig145765.3128.1 ID=mRNA_H-elongata_contig145765.3128.1|Name=mRNA_H-elongata_contig145765.3128.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1482bp|location=Sequence derived from alignment at H-elongata_contig145765:2..742+ (Himanthalia elongata Himel1 dioecious)back to top |