prot_H-elongata_contig1456.3118.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig1456.3118.1
Unique Nameprot_H-elongata_contig1456.3118.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length105
Homology
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BLAST of mRNA_H-elongata_contig1456.3118.1 vs. uniprot
Match: A0A6H5KFL4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFL4_9PHAE)

HSP 1 Score: 137 bits (344), Expect = 2.700e-35
Identity = 71/110 (64.55%), Postives = 86/110 (78.18%), Query Frame = 0 
Query:    1 RKHLEPEWAVVDLLELVEVDLISKLRG-----QRASRATLDAIRLLPIADAGDLFVNYAARGNISVILRYFDEAGLSIAHTHTTLKYQALHAAVEFGHLDSARLLVAMGA 105
            R H+EPEWA V++L+ +E +L  +  G     QR+S+  LDAIRLLP  +AGDLFV  AARG++ V+L YF+E GL I H+HTTLKYQALHAAVEFGHLDSARLLVAMGA
Sbjct:  122 RHHMEPEWAAVEILDCIEEELTPRREGKQQQLQRSSQMVLDAIRLLPAPEAGDLFVTCAARGHVGVLLLYFEE-GLPIDHSHTTLKYQALHAAVEFGHLDSARLLVAMGA 230
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BLAST of mRNA_H-elongata_contig1456.3118.1 vs. uniprot
Match: D7FQ05_ECTSI (Ankyrin repeat domain 16 isoform 2 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQ05_ECTSI)

HSP 1 Score: 135 bits (339), Expect = 1.280e-34
Identity = 70/110 (63.64%), Postives = 86/110 (78.18%), Query Frame = 0 
Query:    1 RKHLEPEWAVVDLLELVEVDLISKLRG-----QRASRATLDAIRLLPIADAGDLFVNYAARGNISVILRYFDEAGLSIAHTHTTLKYQALHAAVEFGHLDSARLLVAMGA 105
            R H+EPEWA V+LL+ +E +L  +  G     QR+S+  LDAIR+LP  +AGD+FV  AARG++ V+L YF+E GL I H+HTTLKYQALHAAVEFGHLDSARLLVAMGA
Sbjct:  163 RHHIEPEWAAVELLDCIEEELTPRREGEQQQLQRSSQMMLDAIRVLPAPEAGDVFVTCAARGHVGVVLFYFEE-GLPIDHSHTTLKYQALHAAVEFGHLDSARLLVAMGA 271
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig1456.3118.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KFL4_9PHAE2.700e-3564.55Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FQ05_ECTSI1.280e-3463.64Ankyrin repeat domain 16 isoform 2 n=1 Tax=Ectocar... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 21..105
e-value: 2.5E-5
score: 25.9
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 48..105
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 80..105
score: 8.95
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 46..105
score: 10.259

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig1456contigH-elongata_contig1456:12549..13142 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig1456.3118.1mRNA_H-elongata_contig1456.3118.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig1456 12547..13142 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig1456.3118.1 ID=prot_H-elongata_contig1456.3118.1|Name=mRNA_H-elongata_contig1456.3118.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=105bp
RKHLEPEWAVVDLLELVEVDLISKLRGQRASRATLDAIRLLPIADAGDLF
VNYAARGNISVILRYFDEAGLSIAHTHTTLKYQALHAAVEFGHLDSARLL
VAMGA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036770Ankyrin_rpt-contain_sf
IPR002110Ankyrin_rpt
IPR020683Ankyrin_rpt-contain_dom