prot_H-elongata_contig145490.3110.1 (polypeptide) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig145490.3110.1 vs. uniprot
Match: D8LEF3_ECTSI (Putative hUPF2 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LEF3_ECTSI) HSP 1 Score: 98.2 bits (243), Expect = 2.330e-22 Identity = 49/59 (83.05%), Postives = 52/59 (88.14%), Query Frame = 0
Query: 2 DPEAKIESEVLRASLRFCRSRYPSIHLAADVLSGLARYQDRVAVKAVDMVLEELRRGIE 60
DPEA +ESEVLRASLR CRSRYP IHLAADVLSGLAR+QDRVAVKAVD VLE + R IE
Sbjct: 1106 DPEADVESEVLRASLRLCRSRYPCIHLAADVLSGLARHQDRVAVKAVDAVLEAMHRAIE 1164
BLAST of mRNA_H-elongata_contig145490.3110.1 vs. uniprot
Match: K8YVG1_NANGC (Regulator of nonsense transcripts 2 (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8YVG1_NANGC) HSP 1 Score: 54.3 bits (129), Expect = 6.350e-7 Identity = 24/58 (41.38%), Postives = 41/58 (70.69%), Query Frame = 0
Query: 5 AKIESEVLRASLRFCRSRYPSIHLAADVLSGLARYQDRVAVKAVDMVLEELRRGIEAS 62
+++E LR+ L+ R ++ ++H ADV++GL +Y + +AV VD VLEEL+RG+E +
Sbjct: 236 SELEVFFLRSVLQAARGKFHALHALADVVAGLGKYHENMAVSMVDEVLEELKRGLETA 293
BLAST of mRNA_H-elongata_contig145490.3110.1 vs. uniprot
Match: W7TWK6_9STRA (Regulator of nonsense transcripts 2 n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TWK6_9STRA) HSP 1 Score: 54.3 bits (129), Expect = 6.480e-7 Identity = 24/58 (41.38%), Postives = 41/58 (70.69%), Query Frame = 0
Query: 5 AKIESEVLRASLRFCRSRYPSIHLAADVLSGLARYQDRVAVKAVDMVLEELRRGIEAS 62
+++E LR+ L+ R ++ ++H ADV++GL +Y + +AV VD VLEEL+RG+E +
Sbjct: 232 SELEVFFLRSVLQAARGKFHALHALADVVAGLGKYHENMAVSMVDEVLEELKRGLETA 289
BLAST of mRNA_H-elongata_contig145490.3110.1 vs. uniprot
Match: A0A4D9D616_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D616_9STRA) HSP 1 Score: 54.3 bits (129), Expect = 6.550e-7 Identity = 24/58 (41.38%), Postives = 41/58 (70.69%), Query Frame = 0
Query: 5 AKIESEVLRASLRFCRSRYPSIHLAADVLSGLARYQDRVAVKAVDMVLEELRRGIEAS 62
+++E LR+ L+ R ++ ++H ADV++GL +Y + +AV VD VLEEL+RG+E +
Sbjct: 762 SELEVFFLRSVLQAARGKFHALHALADVVAGLGKYHENMAVSMVDEVLEELKRGLETA 819
BLAST of mRNA_H-elongata_contig145490.3110.1 vs. uniprot
Match: A0A2P5B6J7_PARAD (26S proteasome regulatory complex, non-ATPase subcomplex, Rpn1 subunit n=2 Tax=Cannabaceae TaxID=3481 RepID=A0A2P5B6J7_PARAD) HSP 1 Score: 52.8 bits (125), Expect = 2.290e-6 Identity = 28/73 (38.36%), Postives = 43/73 (58.90%), Query Frame = 0
Query: 3 PEAKIESEVLRASLRFCRSRYPSIHLAADVLSGLARYQDRVAVKAVD---------MVLEELRRGIEASDEGL 66
P ++ ES +L+ ++ R +Y IHL A + +GL+RY D AV VD +VLEE+R G+E +D G+
Sbjct: 703 PWSECESYLLKCFMKVHRGKYGQIHLIASLTAGLSRYHDEFAVAVVDEVPSSFPENLVLEEIRLGLELNDYGM 775
BLAST of mRNA_H-elongata_contig145490.3110.1 vs. uniprot
Match: A0A371H0E6_MUCPR (Regulator of nonsense transcripts UPF2 (Fragment) n=10 Tax=Phaseoleae TaxID=163735 RepID=A0A371H0E6_MUCPR) HSP 1 Score: 50.4 bits (119), Expect = 1.500e-5 Identity = 26/65 (40.00%), Postives = 41/65 (63.08%), Query Frame = 0
Query: 3 PEAKIESEVLRASLRFCRSRYPSIHLAADVLSGLARYQDRVAVKAVD-MVLEELRRGIEASDEGL 66
P + E +L+ ++ + +Y IHL A + +GL+RY D AV VD +VLEE+R G+E +D G+
Sbjct: 684 PWNECEPYLLKCFMKVHKGKYGQIHLIASLAAGLSRYHDEFAVAIVDEVVLEEIRVGLELNDYGM 748
BLAST of mRNA_H-elongata_contig145490.3110.1 vs. uniprot
Match: A0A2B4S2I7_STYPI (Regulator of nonsense transcripts 2 n=1 Tax=Stylophora pistillata TaxID=50429 RepID=A0A2B4S2I7_STYPI) HSP 1 Score: 49.7 bits (117), Expect = 2.790e-5 Identity = 23/59 (38.98%), Postives = 39/59 (66.10%), Query Frame = 0
Query: 4 EAKIESEVLRASLRFCRSRYPSIHLAADVLSGLARYQDRVAVKAVDMVLEELRRGIEAS 62
E ++ V++ +R +Y S+H AA++L+GLA+Y + V + VD VLEE+R G+E +
Sbjct: 338 EPQVALYVIKCLIRVWNIKYNSVHCAANLLAGLAQYNEDVGLYVVDGVLEEIRLGMETN 396 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig145490.3110.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 7
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-elongata_contig145490.3110.1 ID=prot_H-elongata_contig145490.3110.1|Name=mRNA_H-elongata_contig145490.3110.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=66bpback to top Annotated Terms
The following terms have been associated with this polypeptide:
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