mRNA_H-elongata_contig14535.3105.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig14535.3105.1
Unique NamemRNA_H-elongata_contig14535.3105.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
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BLAST of mRNA_H-elongata_contig14535.3105.1 vs. uniprot
Match: D8LNR0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNR0_ECTSI)

HSP 1 Score: 314 bits (804), Expect = 1.840e-96
Identity = 159/191 (83.25%), Postives = 173/191 (90.58%), Query Frame = 1 
Query:    4 SPMAPDGVMPLPDLRDLAKKSRSKTRQKEVTKVTSASKVERRNVAAFTKLLELDPEADSEEALFTTESYDAFSSILGEGKPFVGIANSYLQSGHTVLLGLVLLCGFVELPGFPLTSLPYDVREFLKTGLLVVYVINTGIAFLSYLEAKRVGQPAAFWAVKGFVLGGLAFNELSQVEPPKAKKLGGGRKRRG 576
            S M+PDGVMPLPD R+LAKK R K R+++ TKV  A+KVER N+AAFTKLLELDPEADSEEALFTTESYDAFSS+LGEGKPFVGIANSYLQSGHTVLL LVLLCGFVE+PGFPLTSLPYDVREFLKTGLLV YVIN GIA+LSYLEAKR+GQPA FWAVKGFVLGGL+FNELSQ+EP K K  GG R+RRG
Sbjct:  213 SVMSPDGVMPLPDFRELAKKPRKKDREQKATKVDEANKVERGNMAAFTKLLELDPEADSEEALFTTESYDAFSSVLGEGKPFVGIANSYLQSGHTVLLALVLLCGFVEIPGFPLTSLPYDVREFLKTGLLVTYVINAGIAYLSYLEAKRIGQPAGFWAVKGFVLGGLSFNELSQIEPVKVKPTGG-RERRG 402
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BLAST of mRNA_H-elongata_contig14535.3105.1 vs. uniprot
Match: A0A836CNB5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CNB5_9STRA)

HSP 1 Score: 212 bits (539), Expect = 3.170e-58
Identity = 112/198 (56.57%), Postives = 138/198 (69.70%), Query Frame = 1 
Query:   19 DGVMPLPDLRDLAKKSRSKTRQKEVTKVTSASKVERRNVAAFTKLLELDPEADSEEALFTTESYDAFSSILGEGKPFVGIANSYLQSGHTVLLGLVLLCGFVELPGFPLTSLPYDVREFLKTGLLVVYVINTGIAFLSYLEAKRVGQPAAFWAVKGFVLGGLAFNELSQ--------------VEPPKAKKLGGGRKR 570
            +GVMPLPDL++L KK     RQ EV+   + SK+ R +  +FTKLLELDPEADS+ +LF  E YD  S+ LGEG+PFVG+ NSYLQSGHTVL  L +LCGFV  PGFPLT LPYD+R FL+ GL++ YVIN  +A  ++ +AK VGQP  FWAVK  VLGGLA+NEL+Q              +EPPK KK G G +R
Sbjct:  182 EGVMPLPDLKELGKKIAK--RQAEVSAQPAKSKIGRGDTKSFTKLLELDPEADSDMSLFNQEGYDYMSAALGEGQPFVGLPNSYLQSGHTVLAVLCVLCGFVVYPGFPLTELPYDLRSFLQRGLMITYVINAAMAAAAFGKAKSVGQPPVFWAVKTLVLGGLAYNELAQXXXXXXXXXXXXXQIEPPKLKKKGKGGRR 377
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BLAST of mRNA_H-elongata_contig14535.3105.1 vs. uniprot
Match: A0A7S1UFT4_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UFT4_9STRA)

HSP 1 Score: 146 bits (368), Expect = 1.040e-34
Identity = 77/178 (43.26%), Postives = 107/178 (60.11%), Query Frame = 1 
Query:   22 GVMPLPDLRDLAKKSRSKTRQKEVTKVTSA-SKVERRNVAAFTKLLELDPEADSEEALFTTESYDAFSSILGEG-KPFVGIANSYLQSGHTVLLGLVLLCGFVELPGFPLTSLPYDVREFLKTGLLVVYVINTGIAFLSYLEAKRVGQPAAFWAVKGFVLGGLAFNELSQVEPPKAKK 549
            G + LPD  D  KK  +         VT+  ++++ R        LELDP AD++   F  E YD  ++++GEG +PF+GI   YLQ+GH++L  + L+C FVE+PG PLT LP  +R+FL TGLLV Y IN G   L+   A++  QP A W +K F LGGLA  EL+++EP K  K
Sbjct:  187 GTLKLPDFEDFRKKQEAXXXXXXERGVTNPIAELQERTRDNLLSELELDPFADADFERFQAEEYDLIAALIGEGSRPFIGIPLPYLQTGHSMLFLITLVCAFVEVPGNPLTELPQPIRDFLSTGLLVTYAINAGTVLLALSAAEQRRQPKALWGIKCFFLGGLALKELTEIEPVKESK 364
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BLAST of mRNA_H-elongata_contig14535.3105.1 vs. uniprot
Match: A0A7S3NNS6_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NNS6_9STRA)

HSP 1 Score: 138 bits (347), Expect = 3.810e-32
Identity = 72/176 (40.91%), Postives = 106/176 (60.23%), Query Frame = 1 
Query:   16 PDGVMPLPDLRDLAKKSRSKTRQ---KEVTKVTSASKVERRNVAAFTKLLELDPEADSEEALFTTESYDAFSSILGEGKP-FVGIANSYLQSGHTVLLGLVLLCGFVELPGFPLTSLPYDVREFLKTGLLVVYVINTGIAFLSYLEAKRVGQPAAFWAVKGFVLGGLAFNELSQVE 531
            PDG + LP    + K++  + R+       +  + +++E  + AA+TK++E DP AD +  L      D FS +LGEG   F+GI ++YLQ GH  LL ++ +  FV  P FPLT  P   R F+K GL  +Y+IN G+AF+++ EAK+V QP  FW VK F LGG+A N+L  +E
Sbjct:  157 PDGRLSLPRFEAVTKRAAERKREAVENRGNEKKNQNRLETFDRAAYTKIIESDPNADVDPNLIRQNDVDYFSIVLGEGADKFIGIESAYLQIGHAALLPVLFIAAFVVEPAFPLTDAPEIYRSFIKQGLCCIYLINAGVAFVAFQEAKKVAQPPLFWLVKSFFLGGVALNQLRTME 332
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BLAST of mRNA_H-elongata_contig14535.3105.1 vs. uniprot
Match: A0A7S0PWW7_9STRA (Hypothetical protein n=1 Tax=Asterionellopsis glacialis TaxID=33640 RepID=A0A7S0PWW7_9STRA)

HSP 1 Score: 135 bits (339), Expect = 5.360e-31
Identity = 79/169 (46.75%), Postives = 106/169 (62.72%), Query Frame = 1 
Query:   34 LPDLRDLAKKS--RSKTRQKEVTKVTSASKVERRNVAAFTKLLELDPEADSEEALFTTESYDAFSSILGE-GKPFVGIANSYLQSGHTV-LLGLVLLCGFVELPGFPLTSLPYDVREFLKTGLLVVYVINTGIAFLSYLEAKRVGQPAAFWAVKGFVLGGLAFNELSQV 528
            LP++RD  KK     +  ++E  +     K++R +  AF KLLE DP ADS+ A F  E Y   S++LGE  KPF+ I    LQ GH +  LG+VL+ GFVE PGFPLT+LP  +R  L+ GL  VY INT +A L+  +A   GQP A WA K F +GGLAF++L+Q+
Sbjct:  158 LPNIRDTLKKKAMEEEVAKQEAEEAAKTPKIKRSDRVAFEKLLEQDPYADSDPAFFEEEEYGTVSALLGERAKPFLSIPFGPLQVGHFIGALGIVLM-GFVEYPGFPLTNLPTPLRGALQGGLGTVYAINTVLAILAIFKASERGQPPALWAAKCFGVGGLAFDQLTQL 325
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BLAST of mRNA_H-elongata_contig14535.3105.1 vs. uniprot
Match: A0A7S2V0V8_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V0V8_9STRA)

HSP 1 Score: 136 bits (342), Expect = 7.920e-31
Identity = 71/172 (41.28%), Postives = 108/172 (62.79%), Query Frame = 1 
Query:   22 GVMPLPDLRDLAKKSRSKTRQKEVTKVTSASKVERRNVAAFTKLLELDPEADSEEALFTTESYDAFSSILGE-GKPFVG-IANSYLQSGHTVLLGLVLLCGFVELPGFPLTSLPYDVREFLKTGLLVVYVINTGIAFLSYLEAKRVGQPAAFWAVKGFVLGGLAFNELSQVE 531
            GV  LPDL+D++ + + +   + V      +++ R +V  F ++ E++P  D   ++F  + YD  +++LG   +P  G I   YLQ+GHTVLL +VLLC  +E PG PLT LP ++R+FLKTGL+V Y IN  +A  S  +A+ + QP  FW  K  +LGGLA+NEL+Q +
Sbjct:  239 GVFSLPDLKDVSARPKKQEAPEPVQAPAKRARLTRSDVEEFRRMTEIEPGFDP--SMFDDDKYDLANAVLGTYARPMFGAIDQGYLQAGHTVLLAVVLLCANIEYPGNPLTELPTEIRDFLKTGLVVNYAINAVLAVFSIFKARNLSQPPQFWFGKTLLLGGLAYNELTQAK 408
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BLAST of mRNA_H-elongata_contig14535.3105.1 vs. uniprot
Match: A0A7S2III6_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2III6_9STRA)

HSP 1 Score: 134 bits (337), Expect = 1.010e-30
Identity = 73/174 (41.95%), Postives = 110/174 (63.22%), Query Frame = 1 
Query:   25 VMPLPDLRDLAKKSRSKTRQKEVTKVTSASKVERRNVA-----AFTKLLELDPEADSEEALFTTESYDAFSSILGEG-KPFVGIANSYLQSGHTVLLGLVLLCGFVELPGFPLTSLPYDVREFLKTGLLVVYVINTGIAFLSYLEAKRVGQPAAFWAVKGFVLGGLAFNELSQV 528
             + LP++RD      ++ RQ++  +   A ++ERR ++     A  +LLE+DP AD ++  F  E Y   S++L EG KPF+GI +  LQ GH +L   ++L  +VE PGFPLT+LP  +RE L++GL  VYV+NT +A L+  +A    QP A WA K F +GGLAF++L+Q+
Sbjct:  156 ALDLPNIRDAM----AQKRQRKKEEAFEAERMERRRISRSDKDAMARLLEMDPLADDDKRNFEEEEYTTVSALLAEGAKPFLGITSGQLQVGHFILSLGIILMAYVEYPGFPLTNLPTPLRECLQSGLGTVYVVNTVLAILAVFKAMERDQPPALWAAKSFSVGGLAFDQLTQL 325
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BLAST of mRNA_H-elongata_contig14535.3105.1 vs. uniprot
Match: A0A7S1GR37_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1GR37_CYCTE)

HSP 1 Score: 130 bits (328), Expect = 2.690e-30
Identity = 78/175 (44.57%), Postives = 105/175 (60.00%), Query Frame = 1 
Query:   13 APDGVMPLPDLRDLAKKSRSKTRQK-EVTKVTSASKVERRNVAAFTKLLELDPEADSEEALFTTESYDAFSSILGE-GKPFVGIANSYLQSGHTV-LLGLVLLCGFVELPGFPLTSLPYDVREFLKTGLLVVYVINTGIAFLSYLEAKRVGQPAAFWAVKGFVLGGLAFNELSQV 528
            AP     LPD+ D+ +K  +    K E  K     KV+R + AA+ KLLE  P AD++++LF  E Y   S++LGE  KPF+GI    LQ GH V  LG+VL+  FVE PGFPLT+LP  +R+ L+ GL  +Y IN  +A  S  +A   GQP   W  K   +GGLAF++LSQ+
Sbjct:   85 APSDSFALPDINDILRKREADEFVKVEQEKQAEKRKVKRSDKAAYQKLLEQSPFADADDSLFEEEEYGTVSALLGERAKPFLGIPTGPLQVGHFVGALGIVLMA-FVEYPGFPLTNLPTPIRDALQGGLATIYSINFVLAIFSVFKASERGQPIPLWFAKTLSVGGLAFDQLSQL 258
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BLAST of mRNA_H-elongata_contig14535.3105.1 vs. uniprot
Match: A0A1E7FEJ1_9STRA (Uncharacterized protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FEJ1_9STRA)

HSP 1 Score: 133 bits (335), Expect = 2.710e-30
Identity = 75/175 (42.86%), Postives = 108/175 (61.71%), Query Frame = 1 
Query:   19 DGVMPLPDLRDLAKK----SRSKTRQKEVTKVTSASKVERRNVAAFTKLLELDPEADSEEALFTTESYDAFSSILGE-GKPFVGIANSYLQSGHTVLLGLVLLCGFVELPGFPLTSLPYDVREFLKTGLLVVYVINTGIAFLSYLEAKRVGQPAAFWAVKGFVLGGLAFNELSQV 528
            DG +PLPD++D  K+    S  K R +E    +   K++RR+  A  KLLE DP AD++E+ F  + Y   S++LGE  KPF+GI    LQ GH +   +++L  F+E PGFPLT+LP  +R  L+ GL  VY IN  +A ++  +A   GQPA  W  K F +GGLAF++L+Q+
Sbjct:  170 DGSLPLPDIKDTLKRKELGSTIKGRMEEEDD-SKKKKIDRRDKVALLKLLEQDPYADADESFFEEQEYTFVSALLGERAKPFMGIPTGPLQVGHFIGALVIVLMAFIEYPGFPLTNLPSPIRGALQGGLGTVYGINVILAIVAVFKAGERGQPALLWIAKVFTVGGLAFDQLTQL 343
[Close]
BLAST of mRNA_H-elongata_contig14535.3105.1 vs. uniprot
Match: W7TR79_9STRA (Uncharacterized protein n=4 Tax=Monodopsidaceae TaxID=425072 RepID=W7TR79_9STRA)

HSP 1 Score: 130 bits (326), Expect = 6.340e-29
Identity = 75/169 (44.38%), Postives = 103/169 (60.95%), Query Frame = 1 
Query:   28 MPLPD-----LRDLAKKSRSKTRQKEVTKVTSASKVERRNVAAFTKLLELDPEADSEEALFTTESYDAFSSILGEGKPFVGIANSYLQSGHTVLLGLVLLCGFVELPGFPLTSLPYDVREFLKTGLLVVYVINTGIAFLSYLEAKRVGQPAAFWAVKGFVLGGLAFNEL 519
            +P+P      L DLA K  +    K     T A   ++  V+   + LE + +A  E  L   + YD  S+ILGEG+P +GI   YLQS HTV++ + LLC F+E PGFPLT+ PY++R+FLK GL+ VY+IN  +A+ S  EA++  Q   FWA+K FVLG LA NEL
Sbjct:  214 LPIPSETVVSLSDLATKFDAAIETKGTALPTLAELGKKAKVSILRRQLEEEEKATKE--LEPIDDYDLSSAILGEGRPVLGIGLPYLQSCHTVIILVSLLCAFIEFPGFPLTNFPYELRDFLKQGLVAVYLINAVLAWDSIKEARKRDQSVFFWALKCFVLGALAHNEL 380
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig14535.3105.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LNR0_ECTSI1.840e-9683.25Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A836CNB5_9STRA3.170e-5856.57Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S1UFT4_9STRA1.040e-3443.26Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A7S3NNS6_9STRA3.810e-3240.91Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
A0A7S0PWW7_9STRA5.360e-3146.75Hypothetical protein n=1 Tax=Asterionellopsis glac... [more]
A0A7S2V0V8_9STRA7.920e-3141.28Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S2III6_9STRA1.010e-3041.95Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]
A0A7S1GR37_CYCTE2.690e-3044.57Hypothetical protein n=1 Tax=Cyclophora tenuis Tax... [more]
A0A1E7FEJ1_9STRA2.710e-3042.86Uncharacterized protein n=1 Tax=Fragilariopsis cyl... [more]
W7TR79_9STRA6.340e-2944.38Uncharacterized protein n=4 Tax=Monodopsidaceae Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig14535contigH-elongata_contig14535:3115..6996 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score313.5
Seed ortholog evalue6.6e-83
Seed eggNOG ortholog2880.D8LNR0
EggNOG OGs2DY4V@1,2S6TZ@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-08_006180.1
Exons5
Model size2248
Cds size570
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929862.2747734-UTR-H-elongata_contig14535:3114..47831622929862.2747734-UTR-H-elongata_contig14535:3114..4783Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig14535 3115..4783 -
1691679187.1745634-UTR-H-elongata_contig14535:3114..47831691679187.1745634-UTR-H-elongata_contig14535:3114..4783Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig14535 3115..4783 -
1622929862.4097488-UTR-H-elongata_contig14535:6987..69961622929862.4097488-UTR-H-elongata_contig14535:6987..6996Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig14535 6988..6996 -
1691679187.2321448-UTR-H-elongata_contig14535:6987..69961691679187.2321448-UTR-H-elongata_contig14535:6987..6996Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig14535 6988..6996 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929862.2918158-CDS-H-elongata_contig14535:4783..49031622929862.2918158-CDS-H-elongata_contig14535:4783..4903Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig14535 4784..4903 -
1691679187.1858146-CDS-H-elongata_contig14535:4783..49031691679187.1858146-CDS-H-elongata_contig14535:4783..4903Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig14535 4784..4903 -
1622929862.3096375-CDS-H-elongata_contig14535:5200..52781622929862.3096375-CDS-H-elongata_contig14535:5200..5278Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig14535 5201..5278 -
1691679187.1946363-CDS-H-elongata_contig14535:5200..52781691679187.1946363-CDS-H-elongata_contig14535:5200..5278Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig14535 5201..5278 -
1622929862.326023-CDS-H-elongata_contig14535:5955..61301622929862.326023-CDS-H-elongata_contig14535:5955..6130Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig14535 5956..6130 -
1691679187.2040424-CDS-H-elongata_contig14535:5955..61301691679187.2040424-CDS-H-elongata_contig14535:5955..6130Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig14535 5956..6130 -
1622929862.3737035-CDS-H-elongata_contig14535:6452..65591622929862.3737035-CDS-H-elongata_contig14535:6452..6559Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig14535 6453..6559 -
1691679187.2159932-CDS-H-elongata_contig14535:6452..65591691679187.2159932-CDS-H-elongata_contig14535:6452..6559Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig14535 6453..6559 -
1622929862.3948085-CDS-H-elongata_contig14535:6897..69871622929862.3948085-CDS-H-elongata_contig14535:6897..6987Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig14535 6898..6987 -
1691679187.2240343-CDS-H-elongata_contig14535:6897..69871691679187.2240343-CDS-H-elongata_contig14535:6897..6987Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig14535 6898..6987 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig14535.3105.1prot_H-elongata_contig14535.3105.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig14535 4784..6987 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig14535.3105.1

>prot_H-elongata_contig14535.3105.1 ID=prot_H-elongata_contig14535.3105.1|Name=mRNA_H-elongata_contig14535.3105.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=190bp
MAPDGVMPLPDLRDLAKKSRSKTRQKEVTKVTSASKVERRNVAAFTKLLE
LDPEADSEEALFTTESYDAFSSILGEGKPFVGIANSYLQSGHTVLLGLVL
LCGFVELPGFPLTSLPYDVREFLKTGLLVVYVINTGIAFLSYLEAKRVGQ
PAAFWAVKGFVLGGLAFNELSQVEPPKAKKLGGGRKRRG*
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mRNA from alignment at H-elongata_contig14535:3115..6996-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig14535.3105.1 ID=mRNA_H-elongata_contig14535.3105.1|Name=mRNA_H-elongata_contig14535.3105.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=3882bp|location=Sequence derived from alignment at H-elongata_contig14535:3115..6996- (Himanthalia elongata Himel1 dioecious)
GATTCTCCCATGGCCCCCGACGGCGTAATGCCTCTGCCCGACCTGCGCGA
TTTGGCCAAGAAGTCTCGCTCAAAGACCCGACAAAAGGAGGTGACGAAGG
TGTGTATCGTCAAAAATGACTTACATACATCCCTTCGTGTGGTACTTACG
GGGGTGCTATTAATGGGTAATAGATGGAGGTGGAGGTGAGCGTCAAGGTA
CCTTCGTGTAAATCTCGTCCCGTCTCATCGAAGACAAATCAATCAAAACT
GCTGGACTTGATCGCTCGGCTGTTTGCGGTTATTTGGTGTGCATTTGGCT
CGGGGCCGCGCTTTTTCCGATCCCGACATGTCCCGTTCTCCCAACGACTA
CCTTCACATAACATATTATTCCGGACATGCTCGCTGGACCGCCCTTGTCC
TGTGTTGATTGGACCTTCCATGACTAACTCGGCCAAGGTGACTAGTGCCA
GCAAGGTGGAGCGTAGGAACGTTGCGGCATTCACGAAATTGCTCGAGCTC
GACCCCGAGGCAGATAGTGAGGAGGCGCTCTTCACCACCGAATCGTGAGA
CATTGCCGGCAGAACACTCGGAGCGGTGACAAACCCGGATCGATGCCGCG
TACGTCCGGAGAGTCCCGTCTTCTGGAGCTTTTTGGTCGTGTAGTACGGG
GTTTCTAATCGTGTGCTTCGACGTCCGGTGGCCTAATAGTCATCTCGATG
GTTTTATTTCAAGATTATTTTAGTGTCGTGGACCACTGACCTTTTATACC
GACAAAACAGTTTAGTAGTACATACGCTCGACGTTCGTACTTACCATATA
TATCTACAAGGTAGTATGGCTCTTGACACCAGGACGTGCTGCGTCGTGAT
TCCCGTATCTCCGAAGGTATGACGCTTTCTCAAGCATTCTAGGCGAGGGC
AAGCCATTCGTTGGCATCGCGAACTCGTACCTCCAGTCGGGCCACACGGT
GTTGTTGGGGCTGGTGTTGTTGTGCGGCTTCGTCGAGCTGCCGGGGTTTC
CCCTGACGTCTCTGCCGTATGATGTTCGAGAGTTCCTCAAGGTGAGCGAT
AGAGTTGTCGGTTGAAAATAGTCGAACCCTGCGTCAAGGACACGTGCCGA
CCCTAAATTTAGTATATTGCCAAAAAGACGCCTTCACGCAGTCAATAACA
TGTCAACCGACACAACTATGGTGAGCGACGGCTAGCATTTGCGATGGAAA
TTTGTCGCGGGTTTCCTCCTTCCTAGTAAGGCCGGCCGGTGTTGTTCCAG
TTGACAAGATCAACACTGTACCATGGCAAGTAGGTATCTGCTCTTCGTTG
CCCTCCAGAGATGGACATCCTCAAGCGTACCTATCAAATTTATACTGTAA
AGGTACATTTTATTTTTTGCGGAAAGGGAAGAAGATGCAATTCCAAGAGG
CAAACAAAAATATCCACGCAAGCGGAATCACTTTTCAAGCCTGTCATGGA
CTATGACTATTAATATGGACTATGACTATTAATACGACAATGTACAATAT
CCACTGATGGATTCAAGATCCGAACAAGCCTTTGTACGTGTTTAGCCAGG
AAGCGCCCATGCTACAGCTACGCGGCATTGTTGGGGTTATATAGAATATA
TCGTATTACATATATTTCTCTCTCTATATATAACCAATGCTTTTGACCGC
GACGGTTCGGACGTTCGGACTCTCGAAATGTTTTTTCTTTCGATGTGCCG
CGTTCCCGTTCTCCCAAGACTGGTCTGCTCGTGGTGTACGTTATCAACAC
GGGCATCGCCTTCCTCAGCTACCTGGAGGCAAAGAGGGTAGGGCAGGTGA
ACAATGATGCCTCGTTTGCGTTTTGTTGCACGGGTTGTATGTGGGACTGT
AACCATCTGGAGTGCGAGATTCCTAAAGCGGCCGTCATGATGCCTGCCGT
TGATCGTTCTACCTAGGGTTTGATGCTGAAAGAGAAGCGTTGCGGGTTGG
GGCGGGGGGGGCGGACCAGTCAATCGCTTCTCAACATAGCCAGATCCACC
GTTCCTTATCTAGAACACCGTCCCAACCCCAACGCAGCTGTACCATTTTG
TAATCTTTCCTCGACCCCTCTCGGCTGTACCCTTTTGCTACAGCCGGCTG
CTTTCTGGGCCGTGAAGGGCTTTGTTCTAGGGGGGCTTGCGTTCAACGAG
CTCAGCCAGGTTGAACCACCGAAGGCCAAGAAACTAGGCGGGGGCAGAAA
ACGACGGGGTTGACTCTGTACTGCCGGAGCACGTGGGCAGGCCGCTGAGC
TAAGAAAAGCGAGGGTTTGGCCCGCCGGTAATCGTTCCATCTTCTAGTTG
TATCCTTGGAAGTTTGACTCCCAGCGGCGGTAGGTTTTGGGCGCTTGGAT
ATTAAGCGGCATGATATCTTCGTTATGTTATTAATTCTTGTGAGTGTAAT
ACAAAAGAATGAGAGAAGGTAGAGCTAGGTTTGCGTAGGAACCATGACAA
GCCTCGGTCATCAACCCAATGACAGGCAAAACGAACGATCCAGTAGTATC
AACAACTGCCGTAAACTTGCAATCTTTGGAGATAACCCCCCCCCCGCCGC
TGCCGCCAGACATAACACTATTTTCCCACGCCATGTATCTACAATACAAT
ACCCTTTGTATTGCAAACAAACGTAGCGATGATGATTTCAGTTTCCTTCC
CGTGAGGGGGTTTTATCTGAAAAGTACGATATGACGGCACAGTGCGCAAT
ACTGGTTGGTCGAGATCATCCCGCGTGCAAGGATCCTCTCGACGGTTGAC
GGGTTTTCTTGGTGGGCGTTGGGGATGGGGAGGGGCTATATCGCGTGCGA
CCTCACCGGCCTCTGTATCTCGAGTACGTTGTACAACAACCCTGAGAACC
ACCCGAATCGTATCGTCACGGTTTCTCTTATGCTCTGCCCTCTGGGGCTC
AAGGAACACGATGCTGCAGTCATCGGAAGATTCGAGTCACATTGGATTAT
TCCACCCGACATAGCAAACCCTGTAAGTTCGTGCTTACCCCTTGCTCTGT
TCCACTATAGCTACAGCTACACAACGATAAAGTTCAAAGTACCCGTCGAA
GAAAAAAAAAAGGTCAAAAGTCAAACACGATTGCGCCACCGCTAGCCCCA
AAATGGGAAATGGTTGTGTATTTGTGGGGGTGTCATTAAATAAATATGCT
TAAAAGCACAGTGGAGTTGGGCGCACTTTATTGAAAATTATTCAAACTAA
TGTAGTTTTGACGAGATATTTTTCCCGTTAGACAGGTATTAACATTAATA
GTAGTTTTGTATGTACCAGCTGTGTAGTATTCGTGTCCGCCGTAGGTCAA
AAGTGTGGTTATGGGTGTAGAAAATACTCGACAGCGGGCTGCAATGAGCT
ACAATTAGGGTTGGGGACTGGACCAGTATCTACTGACAGTAATCCTGTAC
TGGAAGTTGTAGTAGCACTGGCTCAGAGGCAGCCAGTACAGCCAGTACTT
GCCCGTGTTACGTACGTCCCACATTATGCCTCCTAAACCATATGGAAACC
CACCGAATTGCGCTGCATGAGCCGGGAGAATGGTTGAGAGAAGAGAGCAC
ACACTAGCACACACACTAAGGGGGAGGTAGGGAGACCGTACAATCGATGG
AACCATTTTTTATCGTTGTTTAGTTGTTGTTCAGTGGCTGGTGGTGCCTC
GGAGGAAGGCTGCCTTCGTTTGTACTTCGTAGCTATGGAATAATATTTGA
TGGCTTCAAGCGAGGATGTGATGTGATGTGATCCAAGATGTGCTGATGAA
AGATGGTATCTGGCAAAGGCTTTCAACTTGAAGATATTTCGGAAGAAGCT
TCTTGATGAATATGTTGAATACGCTATCGTCGTGTTGTGCCACCCAACCA
AAGCTTTAAGAAAATTTGCCAACCACTTCAAA
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Coding sequence (CDS) from alignment at H-elongata_contig14535:3115..6996-

>mRNA_H-elongata_contig14535.3105.1 ID=mRNA_H-elongata_contig14535.3105.1|Name=mRNA_H-elongata_contig14535.3105.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1140bp|location=Sequence derived from alignment at H-elongata_contig14535:3115..6996- (Himanthalia elongata Himel1 dioecious)
ATGGCCCCCGACGGCGTAATGCCTCTGCCCGACCTGCGCGATTTGGCCAA
GAAGTCTCGCTCAAAGACCCGACAAAAGGAGGTGACGAAGATGGCCCCCG
ACGGCGTAATGCCTCTGCCCGACCTGCGCGATTTGGCCAAGAAGTCTCGC
TCAAAGACCCGACAAAAGGAGGTGACGAAGGTGACTAGTGCCAGCAAGGT
GGAGCGTAGGAACGTTGCGGCATTCACGAAATTGCTCGAGCTCGACCCCG
AGGCAGATAGTGAGGAGGCGCTCTTCACCACCGAATCGTGACTAGTGCCA
GCAAGGTGGAGCGTAGGAACGTTGCGGCATTCACGAAATTGCTCGAGCTC
GACCCCGAGGCAGATAGTGAGGAGGCGCTCTTCACCACCGAATCGTATGA
CGCTTTCTCAAGCATTCTAGGCGAGGGCAAGCCATTCGTTGGCATCGCGA
ACTCGTACCTCCAGTCGGGCCACACGGTGTTGTTGGGGCTGGTGTTGTTG
TGCGGCTTCGTCGAGCTGCCGGGGTTTCCCCTGACGTCTCTGCCGTATGA
TGTTCGAGAGTTCCTCAAGGTATGACGCTTTCTCAAGCATTCTAGGCGAG
GGCAAGCCATTCGTTGGCATCGCGAACTCGTACCTCCAGTCGGGCCACAC
GGTGTTGTTGGGGCTGGTGTTGTTGTGCGGCTTCGTCGAGCTGCCGGGGT
TTCCCCTGACGTCTCTGCCGTATGATGTTCGAGAGTTCCTCAAGACTGGT
CTGCTCGTGGTGTACGTTATCAACACGGGCATCGCCTTCCTCAGCTACCT
GGAGGCAAAGAGGGTAGGGCAGACTGGTCTGCTCGTGGTGTACGTTATCA
ACACGGGCATCGCCTTCCTCAGCTACCTGGAGGCAAAGAGGGTAGGGCAG
CCGGCTGCTTTCTGGGCCGTGAAGGGCTTTGTTCTAGGGGGGCTTGCGTT
CAACGAGCTCAGCCAGGTTGAACCACCGAAGGCCAAGAAACTAGGCGGGG
GCAGAAAACGACGGGGTTGACCGGCTGCTTTCTGGGCCGTGAAGGGCTTT
GTTCTAGGGGGGCTTGCGTTCAACGAGCTCAGCCAGGTTGAACCACCGAA
GGCCAAGAAACTAGGCGGGGGCAGAAAACGACGGGGTTGA
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