prot_H-elongata_contig14534.3103.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig14534.3103.1
Unique Nameprot_H-elongata_contig14534.3103.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length302
Homology
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BLAST of mRNA_H-elongata_contig14534.3103.1 vs. uniprot
Match: A0A6H5KL58_9PHAE (SAP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KL58_9PHAE)

HSP 1 Score: 58.9 bits (141), Expect = 4.950e-6
Identity = 72/242 (29.75%), Postives = 103/242 (42.56%), Query Frame = 0 
Query:   52 GVSEEAERAEEAGTDFLTELRERFSLAPKDIIASHDDDDNDDLAVLVAEGNPLSVGLGSHPSKEGAAAAEALNNDLALPLVVSLVTKDRGGRTLPASDVDSGLVCVDLGGEDASSDGVGGVGNEDKKPADSFLRERTEQRYRPGKKVTGKATDLDFSASMIDMEGRASGGVDAGGEQREETSRGRSDNGSSTNRDSSVLSLQEIKKMKTADLKAELRGRGLRLSGNKAELLARLEETLEQAA 293
            G S+ A+  EEAG DFL ELR+RF++  +++ +  D D       L+A+ + L  G  S+   E    A A+   +        VT   G   +  +D D  +       ED  S+            AD  + E           +  +A   D S                   Q E+T++ +             L L+  K MK  DLK EL+GRGLR+SGNKAELLARLE+ L+Q A
Sbjct:  607 GGSQAADGEEEAGADFLEELRQRFAVETEELASDSDLD-------LLAD-DVLLAGANSYGEVETNGEAGAVTTSVH-------VTGAVGDSPVSGADGDDRMP------EDGRSE------------ADETVAE-----------IADEAVRSDISG------------------QGEDTNKAQ-------------LVLEGFKTMKVTDLKVELKGRGLRVSGNKAELLARLEKALQQPA 773
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BLAST of mRNA_H-elongata_contig14534.3103.1 vs. uniprot
Match: D8LB51_ECTSI (SAP domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB51_ECTSI)

HSP 1 Score: 57.8 bits (138), Expect = 1.230e-5
Identity = 31/44 (70.45%), Postives = 35/44 (79.55%), Query Frame = 0 
Query:  250 LSLQEIKKMKTADLKAELRGRGLRLSGNKAELLARLEETLEQAA 293
            L L+  K MK  DLK EL+GRGLR+SGNKAELLARLEE L+Q A
Sbjct:  871 LVLEGFKAMKVTDLKVELKGRGLRVSGNKAELLARLEEALQQPA 914
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig14534.3103.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KL58_9PHAE4.950e-629.75SAP domain-containing protein n=1 Tax=Ectocarpus s... [more]
D8LB51_ECTSI1.230e-570.45SAP domain-containing protein n=1 Tax=Ectocarpus s... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 278..298
IPR003034SAP domainSMARTSM00513sap_9coord: 255..289
e-value: 2.0E-7
score: 40.6
IPR003034SAP domainPFAMPF02037SAPcoord: 255..288
e-value: 1.2E-11
score: 44.0
IPR003034SAP domainPROSITEPS50800SAPcoord: 255..289
score: 10.825
IPR036361SAP domain superfamilyGENE3D1.10.720.30coord: 232..299
e-value: 2.5E-12
score: 48.1
IPR036361SAP domain superfamilySUPERFAMILY68906SAP domaincoord: 254..291

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig14534contigH-elongata_contig14534:1791..3005 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig14534.3103.1mRNA_H-elongata_contig14534.3103.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig14534 1725..4142 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig14534.3103.1 ID=prot_H-elongata_contig14534.3103.1|Name=mRNA_H-elongata_contig14534.3103.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=302bp
MSGSGEQYPGSSTPRAPATSAENMSPSRGTVHGGGAAAVVSSAGGGEREL
VGVSEEAERAEEAGTDFLTELRERFSLAPKDIIASHDDDDNDDLAVLVAE
GNPLSVGLGSHPSKEGAAAAEALNNDLALPLVVSLVTKDRGGRTLPASDV
DSGLVCVDLGGEDASSDGVGGVGNEDKKPADSFLRERTEQRYRPGKKVTG
KATDLDFSASMIDMEGRASGGVDAGGEQREETSRGRSDNGSSTNRDSSVL
SLQEIKKMKTADLKAELRGRGLRLSGNKAELLARLEETLEQAATLKDRSR
Q*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003034SAP_dom
IPR036361SAP_dom_sf