mRNA_H-elongata_contig145333.3102.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig145333.3102.1 vs. uniprot
Match: A0A6H5KUD2_9PHAE (Aconitate hydratase, mitochondrial n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KUD2_9PHAE) HSP 1 Score: 153 bits (387), Expect = 1.070e-41 Identity = 73/77 (94.81%), Postives = 76/77 (98.70%), Query Frame = 2
Query: 2 DATAQMAVLQFISSGLPKTACPTTIHCDHLIAAESGADADMDAAKVTNKEVYDFLASAGAKYGVGFWKPGSGIIHQV 232
DATAQMAVLQFISSGLPKTACPTTIHCDHLIAAESGAD+DM AAKVTNKEVYDFLASAGAKYG+GFWKPGSGIIHQ+
Sbjct: 97 DATAQMAVLQFISSGLPKTACPTTIHCDHLIAAESGADSDMAAAKVTNKEVYDFLASAGAKYGIGFWKPGSGIIHQI 173
BLAST of mRNA_H-elongata_contig145333.3102.1 vs. uniprot
Match: A0A836CC46_9STRA (Aconitate hydratase, mitochondrial n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CC46_9STRA) HSP 1 Score: 141 bits (355), Expect = 2.610e-37 Identity = 67/77 (87.01%), Postives = 72/77 (93.51%), Query Frame = 2
Query: 2 DATAQMAVLQFISSGLPKTACPTTIHCDHLIAAESGADADMDAAKVTNKEVYDFLASAGAKYGVGFWKPGSGIIHQV 232
DATAQMAVLQFISSGLP+TA PTTIHCDHLIAAE GADAD+ AA TNKEVYDFL+SAGAKYG+GFWKPGSGIIHQ+
Sbjct: 106 DATAQMAVLQFISSGLPQTAVPTTIHCDHLIAAEKGADADLKAATTTNKEVYDFLSSAGAKYGMGFWKPGSGIIHQI 182
BLAST of mRNA_H-elongata_contig145333.3102.1 vs. uniprot
Match: A0A7S2V7X3_9STRA (Aconitate hydratase, mitochondrial n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V7X3_9STRA) HSP 1 Score: 139 bits (351), Expect = 9.110e-37 Identity = 66/77 (85.71%), Postives = 72/77 (93.51%), Query Frame = 2
Query: 2 DATAQMAVLQFISSGLPKTACPTTIHCDHLIAAESGADADMDAAKVTNKEVYDFLASAGAKYGVGFWKPGSGIIHQV 232
DATAQMAVLQFISSGLPKTA P+TIHCDHLIAAE G+ D+ AAKVTNKEVYDFLASAGAKYG+GFW+PGSGIIHQ+
Sbjct: 103 DATAQMAVLQFISSGLPKTAVPSTIHCDHLIAAEKGSSDDLHAAKVTNKEVYDFLASAGAKYGIGFWQPGSGIIHQI 179
BLAST of mRNA_H-elongata_contig145333.3102.1 vs. uniprot
Match: A0A7S3YLR6_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YLR6_HETAK) HSP 1 Score: 139 bits (350), Expect = 9.590e-37 Identity = 66/77 (85.71%), Postives = 73/77 (94.81%), Query Frame = 2
Query: 2 DATAQMAVLQFISSGLPKTACPTTIHCDHLIAAESGADADMDAAKVTNKEVYDFLASAGAKYGVGFWKPGSGIIHQV 232
DATAQMAVLQFISSGLPKTA P+TIHCDHLIAAE+G++AD+ AAK TN EVYDFLASAGAKYG+GFWKPGSGIIHQ+
Sbjct: 3 DATAQMAVLQFISSGLPKTAVPSTIHCDHLIAAENGSNADLAAAKSTNAEVYDFLASAGAKYGIGFWKPGSGIIHQI 79
BLAST of mRNA_H-elongata_contig145333.3102.1 vs. uniprot
Match: A0A183X0T5_TRIRE (Aconitase domain-containing protein n=1 Tax=Trichobilharzia regenti TaxID=157069 RepID=A0A183X0T5_TRIRE) HSP 1 Score: 127 bits (318), Expect = 1.480e-36 Identity = 60/77 (77.92%), Postives = 67/77 (87.01%), Query Frame = 2
Query: 2 DATAQMAVLQFISSGLPKTACPTTIHCDHLIAAESGADADMDAAKVTNKEVYDFLASAGAKYGVGFWKPGSGIIHQV 232
DATAQMA+LQFISSGLP+ A P+T+HCDHLI A+ GA AD+ A TNKEVYDFLASA AKYG+GFWKPGSGIIHQV
Sbjct: 11 DATAQMALLQFISSGLPRVAVPSTVHCDHLIEAKDGAGADLIRANDTNKEVYDFLASASAKYGIGFWKPGSGIIHQV 87
BLAST of mRNA_H-elongata_contig145333.3102.1 vs. uniprot
Match: A0A2H1C4Y3_FASHE (Aconitase family protein (Fragment) n=1 Tax=Fasciola hepatica TaxID=6192 RepID=A0A2H1C4Y3_FASHE) HSP 1 Score: 132 bits (331), Expect = 1.580e-36 Identity = 61/77 (79.22%), Postives = 68/77 (88.31%), Query Frame = 2
Query: 2 DATAQMAVLQFISSGLPKTACPTTIHCDHLIAAESGADADMDAAKVTNKEVYDFLASAGAKYGVGFWKPGSGIIHQV 232
DATAQMA+LQFISSGLPK A P+TIHCDHLI A GAD+D+D A +NKEVYDFLASA AKYG+GFWKPGSGIIHQ+
Sbjct: 96 DATAQMAILQFISSGLPKVAVPSTIHCDHLIEARDGADSDLDRANDSNKEVYDFLASASAKYGIGFWKPGSGIIHQI 172
BLAST of mRNA_H-elongata_contig145333.3102.1 vs. uniprot
Match: A0A813B7B0_9DINO (Hypothetical protein (Fragment) n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A813B7B0_9DINO) HSP 1 Score: 131 bits (329), Expect = 3.310e-36 Identity = 61/77 (79.22%), Postives = 69/77 (89.61%), Query Frame = 2
Query: 2 DATAQMAVLQFISSGLPKTACPTTIHCDHLIAAESGADADMDAAKVTNKEVYDFLASAGAKYGVGFWKPGSGIIHQV 232
DATAQMAVLQFISSGLPK A P+TIHCDHLIAAE G+ AD+ AA NKEVYDFL++AGAK+G+GFWKPGSGIIHQ+
Sbjct: 94 DATAQMAVLQFISSGLPKVAVPSTIHCDHLIAAEKGSSADLAAASEANKEVYDFLSTAGAKFGIGFWKPGSGIIHQI 170
BLAST of mRNA_H-elongata_contig145333.3102.1 vs. uniprot
Match: W7TSY3_9STRA (Aconitate hydratase, mitochondrial n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TSY3_9STRA) HSP 1 Score: 138 bits (347), Expect = 3.320e-36 Identity = 65/77 (84.42%), Postives = 73/77 (94.81%), Query Frame = 2
Query: 2 DATAQMAVLQFISSGLPKTACPTTIHCDHLIAAESGADADMDAAKVTNKEVYDFLASAGAKYGVGFWKPGSGIIHQV 232
DATAQMAVLQFISSGLPKTA P+TIHCDHLIAAE+G+ D+ AA+VTNKEVYDFLASAGAK+G+GFWKPGSGIIHQ+
Sbjct: 144 DATAQMAVLQFISSGLPKTAVPSTIHCDHLIAAENGSAKDLHAAQVTNKEVYDFLASAGAKFGIGFWKPGSGIIHQI 220
BLAST of mRNA_H-elongata_contig145333.3102.1 vs. uniprot
Match: A0A7S0P924_CAFRO (Aconitate hydratase, mitochondrial n=3 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A7S0P924_CAFRO) HSP 1 Score: 137 bits (344), Expect = 8.170e-36 Identity = 64/77 (83.12%), Postives = 72/77 (93.51%), Query Frame = 2
Query: 2 DATAQMAVLQFISSGLPKTACPTTIHCDHLIAAESGADADMDAAKVTNKEVYDFLASAGAKYGVGFWKPGSGIIHQV 232
DATAQMAVLQFISSGLPK A P+TIHCDHLIAAE+GADADM AAK N+EVYDFLA+AGAK+G+GFW+PGSGIIHQ+
Sbjct: 103 DATAQMAVLQFISSGLPKVAAPSTIHCDHLIAAENGADADMKAAKDLNREVYDFLATAGAKFGIGFWRPGSGIIHQI 179
BLAST of mRNA_H-elongata_contig145333.3102.1 vs. uniprot
Match: A0A0N4XQF2_NIPBR (Probable aconitate hydratase, mitochondrial (inferred by orthology to a C. elegans protein) n=1 Tax=Nippostrongylus brasiliensis TaxID=27835 RepID=A0A0N4XQF2_NIPBR) HSP 1 Score: 127 bits (319), Expect = 1.280e-35 Identity = 60/77 (77.92%), Postives = 67/77 (87.01%), Query Frame = 2
Query: 2 DATAQMAVLQFISSGLPKTACPTTIHCDHLIAAESGADADMDAAKVTNKEVYDFLASAGAKYGVGFWKPGSGIIHQV 232
DATAQMA+LQFISSGLPKTA P+TIHCDHLI A+ G D D+ AK NKEVY+FL+SAG KYGVGFWKPGSGIIHQ+
Sbjct: 51 DATAQMAMLQFISSGLPKTAVPSTIHCDHLIEAQKGGDKDLARAKELNKEVYNFLSSAGNKYGVGFWKPGSGIIHQI 127 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig145333.3102.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig145333.3102.1 >prot_H-elongata_contig145333.3102.1 ID=prot_H-elongata_contig145333.3102.1|Name=mRNA_H-elongata_contig145333.3102.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=79bp GRNGSDGRAPVHLVRPSQNRMPHDHPLRPPDRGRERRRCRHGRSQGHQQGback to top mRNA from alignment at H-elongata_contig145333:272..1397- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig145333.3102.1 ID=mRNA_H-elongata_contig145333.3102.1|Name=mRNA_H-elongata_contig145333.3102.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1126bp|location=Sequence derived from alignment at H-elongata_contig145333:272..1397- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig145333:272..1397- >mRNA_H-elongata_contig145333.3102.1 ID=mRNA_H-elongata_contig145333.3102.1|Name=mRNA_H-elongata_contig145333.3102.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=474bp|location=Sequence derived from alignment at H-elongata_contig145333:272..1397- (Himanthalia elongata Himel1 dioecious)back to top |