prot_H-elongata_contig14517.3093.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig14517.3093.1
Unique Name	prot_H-elongata_contig14517.3093.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	89

Homology

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BLAST of mRNA_H-elongata_contig14517.3093.1 vs. uniprot
Match: A0A6H5K1J1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1J1_9PHAE)

HSP 1 Score: 96.3 bits (238), Expect = 2.340e-21
Identity = 40/88 (45.45%), Postives = 62/88 (70.45%), Query Frame = 0

Query:    1 MWHRRLGHLHAQSLDIIRKRYGTGITFEGAVSACDICAVGKAQHFAHLKTANQNVNRPSRLCYEDLMGPFTHVTIGGYKCVRKITDKY 88
            +WHRR+GH+H +SLDI+RK  G G+ + G +SACD+CAVG ++   H K A+ + +RP +L   DLMGPF+   +GG+  ++K  D++
Sbjct:  268 LWHRRVGHVHGRSLDILRKVQGNGVEYNGELSACDVCAVGNSKQQNHPKRASYDASRPFQLVTTDLMGPFSPPALGGFLYIKKFVDQH 355

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BLAST of mRNA_H-elongata_contig14517.3093.1 vs. uniprot
Match: A0A6H5KP59_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KP59_9PHAE)

HSP 1 Score: 79.3 bits (194), Expect = 2.110e-15
Identity = 38/91 (41.76%), Postives = 56/91 (61.54%), Query Frame = 0

Query:    2 WHRRLGHLHAQSLDIIRKRYGTGITFEGAVSACDICAVGKAQHFAHLKTANQNVNRPSRLCYEDLMGPFT---HVTIGGYKCVRKITDKYT 89
            WHRRLGHL+A+SL+I+RK  GTG+ +  ++S C +C +GK +   H K + + ++RP +L   D MGP     +   G +    KITD YT
Sbjct:  309 WHRRLGHLNARSLEILRKDTGTGVDYRDSLSPCGVCQIGKHKQSPHPKQSTRELSRPGQLVVIDSMGPVNPPAYYKGGSFPYACKITDDYT 399

[Close]

BLAST of mRNA_H-elongata_contig14517.3093.1 vs. uniprot
Match: A0A6H5KZ34_9PHAE (Integrase catalytic domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZ34_9PHAE)

HSP 1 Score: 77.0 bits (188), Expect = 3.050e-15
Identity = 38/91 (41.76%), Postives = 54/91 (59.34%), Query Frame = 0

Query:    2 WHRRLGHLHAQSLDIIRKRYGTGITFEGAVSACDICAVGKAQHFAHLKTANQNVNRPSRLCYEDLMGPFTHVTI---GGYKCVRKITDKYT 89
            WHRRLGHL+A+SLDI+RK  GTG+ +  ++S C +C + K +   H K + + ++RP +L   D MGP         G +    KITD YT
Sbjct:   45 WHRRLGHLNARSLDILRKDTGTGVDYRDSLSPCGVCQIAKHKQSPHPKQSTRELSRPGQLVVIDNMGPVNPPAKYKGGSFPYACKITDDYT 135

[Close]

BLAST of mRNA_H-elongata_contig14517.3093.1 vs. uniprot
Match: A0A6H5KMG5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMG5_9PHAE)

HSP 1 Score: 79.0 bits (193), Expect = 3.430e-15
Identity = 39/91 (42.86%), Postives = 55/91 (60.44%), Query Frame = 0

Query:    2 WHRRLGHLHAQSLDIIRKRYGTGITFEGAVSACDICAVGKAQHFAHLKTANQNVNRPSRLCYEDLMGPFTHVTI---GGYKCVRKITDKYT 89
            WHRRLGHL+A+SLDI+RK  GTG+ +  ++S C +C + K +   H K + + ++RP +L     MGP         G +  VRKITD YT
Sbjct:  334 WHRRLGHLNARSLDILRKDTGTGVDYRDSLSPCGVCQIAKHKQSPHPKQSTRELSRPGQLVVIGNMGPVNPPAKYKGGSFPYVRKITDDYT 424

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BLAST of mRNA_H-elongata_contig14517.3093.1 vs. uniprot
Match: A0A6H5KT84_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KT84_9PHAE)

HSP 1 Score: 77.8 bits (190), Expect = 8.700e-15
Identity = 38/91 (41.76%), Postives = 54/91 (59.34%), Query Frame = 0

Query:    2 WHRRLGHLHAQSLDIIRKRYGTGITFEGAVSACDICAVGKAQHFAHLKTANQNVNRPSRLCYEDLMGPFTHVTI---GGYKCVRKITDKYT 89
            WHRRLGHL+A+SLDI+RK  GTG+ +  ++S C +C + K +   H K + + ++RP +L   D MGP         G +    KITD YT
Sbjct:  421 WHRRLGHLNARSLDILRKDTGTGVDYRDSLSPCGVCQIAKHKQSPHPKQSTREISRPGQLVVIDNMGPVNPPAKYKGGSFPYACKITDDYT 511

[Close]

BLAST of mRNA_H-elongata_contig14517.3093.1 vs. uniprot
Match: A0A6H5KCM0_9PHAE (Integrase catalytic domain-containing protein n=5 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCM0_9PHAE)

HSP 1 Score: 77.0 bits (188), Expect = 1.600e-14
Identity = 38/91 (41.76%), Postives = 54/91 (59.34%), Query Frame = 0

Query:    2 WHRRLGHLHAQSLDIIRKRYGTGITFEGAVSACDICAVGKAQHFAHLKTANQNVNRPSRLCYEDLMGPFTHVTI---GGYKCVRKITDKYT 89
            WHRRLGHL+A+SLDI+RK  GTG+ +  ++S C +C + K +   H K + + ++RP +L   D MGP         G +    KITD YT
Sbjct:   45 WHRRLGHLNARSLDILRKDTGTGVDYRDSLSPCGVCQIAKHKQSPHPKQSTRELSRPGQLVVIDNMGPVNPPAKYKGGSFPYACKITDDYT 135

[Close]

BLAST of mRNA_H-elongata_contig14517.3093.1 vs. uniprot
Match: A0A6H5JWA3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWA3_9PHAE)

HSP 1 Score: 77.0 bits (188), Expect = 1.610e-14
Identity = 38/91 (41.76%), Postives = 54/91 (59.34%), Query Frame = 0

Query:    2 WHRRLGHLHAQSLDIIRKRYGTGITFEGAVSACDICAVGKAQHFAHLKTANQNVNRPSRLCYEDLMGPFTHVTI---GGYKCVRKITDKYT 89
            WHRRLGHL+A+SLDI+RK  GTG+ +  ++S C +C + K +   HLK + + ++RP +L     MGP         G +    KITD YT
Sbjct:  327 WHRRLGHLNARSLDILRKDTGTGVDYRDSLSPCGVCQIAKHKQSPHLKQSTRELSRPGQLVVIGNMGPVNPPAKNKGGSFPYACKITDDYT 417

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BLAST of mRNA_H-elongata_contig14517.3093.1 vs. uniprot
Match: A0A6H5K500_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K500_9PHAE)

HSP 1 Score: 77.0 bits (188), Expect = 1.630e-14
Identity = 38/91 (41.76%), Postives = 54/91 (59.34%), Query Frame = 0

Query:    2 WHRRLGHLHAQSLDIIRKRYGTGITFEGAVSACDICAVGKAQHFAHLKTANQNVNRPSRLCYEDLMGPFTHVTI---GGYKCVRKITDKYT 89
            WHRRLGHL+A+SLDI+RK  GTG+ +  ++S C +C + K +   H K + + ++RP +L   D MGP         G +    KITD YT
Sbjct:   45 WHRRLGHLNARSLDILRKDTGTGVDYRDSLSPCGVCQIAKHKQSPHPKQSTRELSRPGQLVVIDNMGPVNPPAKYKGGSFPYACKITDDYT 135

[Close]

BLAST of mRNA_H-elongata_contig14517.3093.1 vs. uniprot
Match: A0A6H5K1R7_9PHAE (Integrase catalytic domain-containing protein (Fragment) n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1R7_9PHAE)

HSP 1 Score: 77.0 bits (188), Expect = 1.640e-14
Identity = 38/91 (41.76%), Postives = 54/91 (59.34%), Query Frame = 0

Query:    2 WHRRLGHLHAQSLDIIRKRYGTGITFEGAVSACDICAVGKAQHFAHLKTANQNVNRPSRLCYEDLMGPFTHVTI---GGYKCVRKITDKYT 89
            WHRRLGHL+A+SLDI+RK  GTG+ +  ++S C +C + K +   H K + + ++RP +L   D MGP         G +    KITD YT
Sbjct:   45 WHRRLGHLNARSLDILRKDTGTGVDYRDSLSPCGVCQIAKHKQSPHPKQSTRELSRPGQLVVIDNMGPVNPPAKYKGGSFPYACKITDDYT 135

[Close]

BLAST of mRNA_H-elongata_contig14517.3093.1 vs. uniprot
Match: A0A6H5JRJ1_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRJ1_9PHAE)

HSP 1 Score: 77.0 bits (188), Expect = 1.650e-14
Identity = 38/91 (41.76%), Postives = 54/91 (59.34%), Query Frame = 0

Query:    2 WHRRLGHLHAQSLDIIRKRYGTGITFEGAVSACDICAVGKAQHFAHLKTANQNVNRPSRLCYEDLMGPFT---HVTIGGYKCVRKITDKYT 89
            WHRRLGHL+A+SLDI+RK  GTG+ F  ++S C +C + K +   H K + + ++RP +L   D +GP         G +    KITD YT
Sbjct:   45 WHRRLGHLNARSLDILRKDTGTGVDFRDSLSPCGVCQIAKYKQSPHPKQSTRELSRPGQLVVIDNVGPVNPPAKYNGGSFPYACKITDDYT 135

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig14517.3093.1 vs. uniprot

BLAST of mRNA_H-elongata_contig14517.3093.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 24


Match Name	E-value	Identity	Description
A0A6H5K1J1_9PHAE	2.340e-21	45.45	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5KP59_9PHAE	2.110e-15	41.76	CCHC-type domain-containing protein n=1 Tax=Ectoca...	[more]
A0A6H5KZ34_9PHAE	3.050e-15	41.76	Integrase catalytic domain-containing protein n=2 ...	[more]
A0A6H5KMG5_9PHAE	3.430e-15	42.86	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5KT84_9PHAE	8.700e-15	41.76	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5KCM0_9PHAE	1.600e-14	41.76	Integrase catalytic domain-containing protein n=5 ...	[more]
A0A6H5JWA3_9PHAE	1.610e-14	41.76	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5K500_9PHAE	1.630e-14	41.76	Integrase catalytic domain-containing protein n=1 ...	[more]
A0A6H5K1R7_9PHAE	1.640e-14	41.76	Integrase catalytic domain-containing protein (Fra...	[more]
A0A6H5JRJ1_9PHAE	1.650e-14	41.76	Integrase catalytic domain-containing protein n=1 ...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025724	GAG-pre-integrase domain	PFAM	PF13976	gag_pre-integrs	coord: 1..42 e-value: 2.3E-6 score: 27.4

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig14517	contig	H-elongata_contig14517:33..299 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig14517.3093.1	mRNA_H-elongata_contig14517.3093.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig14517 33..305 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig14517.3093.1 ID=prot_H-elongata_contig14517.3093.1|Name=mRNA_H-elongata_contig14517.3093.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=89bp
MWHRRLGHLHAQSLDIIRKRYGTGITFEGAVSACDICAVGKAQHFAHLKT
ANQNVNRPSRLCYEDLMGPFTHVTIGGYKCVRKITDKYT

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR025724	GAG-pre-integrase_dom