prot_H-elongata_contig103710.309.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig103710.309.1
Unique Name	prot_H-elongata_contig103710.309.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	96

Homology

[Close]

BLAST of mRNA_H-elongata_contig103710.309.1 vs. uniprot
Match: A0A6H5KYW9_9PHAE (CULLIN_2 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KYW9_9PHAE)

HSP 1 Score: 188 bits (477), Expect = 4.690e-54
Identity = 93/96 (96.88%), Postives = 95/96 (98.96%), Query Frame = 0

Query:    1 MGNEIIKRREAKIEGGEKDTNQDPNFVKELLALHDKYMAVVNEQFAGNSLLQKALKEAFVEFVNRDVGKFKNADLMCSFCDRILKTGGEKLSDAEV 96
            MGNEIIKRREAKIEGGEKDTNQDPNFVKELLALHDKYMAVVN+QFAGNSLLQKALKEAFV+FVNRDVGKFKNADLMCSFCDRILKTGGEKL DAEV
Sbjct:  320 MGNEIIKRREAKIEGGEKDTNQDPNFVKELLALHDKYMAVVNDQFAGNSLLQKALKEAFVDFVNRDVGKFKNADLMCSFCDRILKTGGEKLGDAEV 415

[Close]

BLAST of mRNA_H-elongata_contig103710.309.1 vs. uniprot
Match: W7TKB6_9STRA (Cullin protein 1 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TKB6_9STRA)

HSP 1 Score: 150 bits (379), Expect = 6.190e-45
Identity = 76/97 (78.35%), Postives = 84/97 (86.60%), Query Frame = 0

Query:    1 MGNEIIKRREAKI-EGGEKDTNQDPNFVKELLALHDKYMAVVNEQFAGNSLLQKALKEAFVEFVNRDVGKFKNADLMCSFCDRILKTGGEKLSDAEV 96
            MGNE+I +REA+I E GEKDTNQDPNFVK LL+LHDK++ VVN QF  NSL  KALKEAFVEFVN+DVGKFKNADL+ SFCDRILK GGEKL DAEV
Sbjct:   26 MGNEVINQREARIHEEGEKDTNQDPNFVKALLSLHDKFVGVVNAQFEKNSLFHKALKEAFVEFVNKDVGKFKNADLLSSFCDRILKKGGEKLGDAEV 122

[Close]

BLAST of mRNA_H-elongata_contig103710.309.1 vs. uniprot
Match: D7FJN2_ECTSI (CULLIN_2 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJN2_ECTSI)

HSP 1 Score: 159 bits (401), Expect = 1.400e-44
Identity = 82/95 (86.32%), Postives = 84/95 (88.42%), Query Frame = 0

Query:    1 MGNEIIKRREAKIEGGEKDTNQDPNFVKELLALHDKYMAVVNEQFAGNSLLQKALKEAFVEFVNRDVGKFKNADLMCSFCDRILKTGGEKLSDAE 95
            M NEIIKR  AKIEGGEKD NQDPNFVKELLALH KYMAVVN+QF GNSLLQKAL  AFV FVNRDVGKFKNADLMCSFCDRI+KTGGEKL D E
Sbjct:   57 MRNEIIKRPGAKIEGGEKDINQDPNFVKELLALHGKYMAVVNDQFVGNSLLQKAL--AFVGFVNRDVGKFKNADLMCSFCDRIMKTGGEKLGDVE 149

[Close]

BLAST of mRNA_H-elongata_contig103710.309.1 vs. uniprot
Match: A0A835YLK2_9STRA (Cullin n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLK2_9STRA)

HSP 1 Score: 161 bits (408), Expect = 2.430e-44
Identity = 79/95 (83.16%), Postives = 87/95 (91.58%), Query Frame = 0

Query:    2 GNEIIKRREAKIEGGEKDTNQDPNFVKELLALHDKYMAVVNEQFAGNSLLQKALKEAFVEFVNRDVGKFKNADLMCSFCDRILKTGGEKLSDAEV 96
            GN++I RRE +IEGGEKD+NQDP  VKELLALHDKYMAVV EQF GNSLLQKALK+AFVEFVNRDVGKFKNADLM +FCDRILKTGGE+LS+ EV
Sbjct:  323 GNDVIVRREERIEGGEKDSNQDPTVVKELLALHDKYMAVVTEQFGGNSLLQKALKDAFVEFVNRDVGKFKNADLMSNFCDRILKTGGERLSEGEV 417

[Close]

BLAST of mRNA_H-elongata_contig103710.309.1 vs. uniprot
Match: F0XVV7_AURAN (CULLIN_2 domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XVV7_AURAN)

HSP 1 Score: 160 bits (404), Expect = 8.730e-44
Identity = 78/96 (81.25%), Postives = 87/96 (90.62%), Query Frame = 0

Query:    1 MGNEIIKRREAKIEGGEKDTNQDPNFVKELLALHDKYMAVVNEQFAGNSLLQKALKEAFVEFVNRDVGKFKNADLMCSFCDRILKTGGEKLSDAEV 96
            MGNE+I RREA++E GEKD+NQDP FVKELLALHDKYMAVV+ QFAGN+L QKALKEAFVEF NRDVGKF NA+LM SFCDRILK+GGEKLSD +V
Sbjct:  318 MGNEVINRREARLEAGEKDSNQDPAFVKELLALHDKYMAVVSAQFAGNALFQKALKEAFVEFTNRDVGKFTNAELMSSFCDRILKSGGEKLSDEDV 413

[Close]

BLAST of mRNA_H-elongata_contig103710.309.1 vs. uniprot
Match: A0A7S3JSF7_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JSF7_9STRA)

HSP 1 Score: 154 bits (388), Expect = 1.540e-41
Identity = 75/96 (78.12%), Postives = 84/96 (87.50%), Query Frame = 0

Query:    1 MGNEIIKRREAKIEGGEKDTNQDPNFVKELLALHDKYMAVVNEQFAGNSLLQKALKEAFVEFVNRDVGKFKNADLMCSFCDRILKTGGEKLSDAEV 96
            MG +II RRE ++E GEKDTNQDP  VKELLALHDKY+AVV +QF+GNSL QKALKEAFVEFVN DVGKF NA+LM SFCDRILK+GGEKLSD E+
Sbjct:  318 MGTDIISRREQRLENGEKDTNQDPALVKELLALHDKYLAVVAQQFSGNSLFQKALKEAFVEFVNHDVGKFSNAELMSSFCDRILKSGGEKLSDEEI 413

[Close]

BLAST of mRNA_H-elongata_contig103710.309.1 vs. uniprot
Match: A0A7S3ZYF8_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZYF8_9STRA)

HSP 1 Score: 149 bits (376), Expect = 6.890e-41
Identity = 73/96 (76.04%), Postives = 83/96 (86.46%), Query Frame = 0

Query:    1 MGNEIIKRREAKIEGGEKDTNQDPNFVKELLALHDKYMAVVNEQFAGNSLLQKALKEAFVEFVNRDVGKFKNADLMCSFCDRILKTGGEKLSDAEV 96
            MGN+II RREA++  G KD+NQDP FVKELLALHDKY+AVV+EQF GN+L QKALKEAFVEF NRDVGK  NA+LM SFCDRILK+GGEKL D +V
Sbjct:  322 MGNDIIDRREARLSEGAKDSNQDPAFVKELLALHDKYLAVVSEQFGGNALFQKALKEAFVEFANRDVGKHTNAELMSSFCDRILKSGGEKLGDEDV 417

[Close]

BLAST of mRNA_H-elongata_contig103710.309.1 vs. uniprot
Match: A0A7S3UPV7_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UPV7_HETAK)

HSP 1 Score: 142 bits (357), Expect = 5.220e-40
Identity = 74/96 (77.08%), Postives = 80/96 (83.33%), Query Frame = 0

Query:    2 GNEIIKRREAKIEGGEKDTNQ-DPNFVKELLALHDKYMAVVNEQFAGNSLLQKALKEAFVEFVNRDVGKFKNADLMCSFCDRILKTGGEKLSDAEV 96
            G E+I RREAK+  GE+D    DP +VKELLALHDKYMAVV EQF GNSL QKALKEAFVE VNRDVGK KNADLM SFCDRILKTGGEKL+D +V
Sbjct:  131 GVEVIARREAKLGSGERDPGGGDPAYVKELLALHDKYMAVVTEQFGGNSLFQKALKEAFVEVVNRDVGKMKNADLMSSFCDRILKTGGEKLNDEQV 226

[Close]

BLAST of mRNA_H-elongata_contig103710.309.1 vs. uniprot
Match: A0A8J2SP16_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SP16_9STRA)

HSP 1 Score: 149 bits (376), Expect = 6.660e-40
Identity = 73/96 (76.04%), Postives = 83/96 (86.46%), Query Frame = 0

Query:    1 MGNEIIKRREAKIEGGEKDTNQDPNFVKELLALHDKYMAVVNEQFAGNSLLQKALKEAFVEFVNRDVGKFKNADLMCSFCDRILKTGGEKLSDAEV 96
            MGN+II RREA++  G KD+NQDP FVKELLALHDKY+AVV+EQF GN+L QKALKEAFVEF NRDVGK  NA+LM SFCDRILK+GGEKL D +V
Sbjct:  322 MGNDIIDRREARLSEGAKDSNQDPAFVKELLALHDKYLAVVSEQFGGNALFQKALKEAFVEFANRDVGKHTNAELMSSFCDRILKSGGEKLGDEDV 417

[Close]

BLAST of mRNA_H-elongata_contig103710.309.1 vs. uniprot
Match: A0A4D9DID3_9STRA (CULLIN_2 domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DID3_9STRA)

HSP 1 Score: 149 bits (376), Expect = 6.860e-40
Identity = 75/97 (77.32%), Postives = 84/97 (86.60%), Query Frame = 0

Query:    1 MGNEIIKRREAKI-EGGEKDTNQDPNFVKELLALHDKYMAVVNEQFAGNSLLQKALKEAFVEFVNRDVGKFKNADLMCSFCDRILKTGGEKLSDAEV 96
            MGNE+I +REA++ E GEKDTNQDPNFVK LL+LHDK++ VVN QF  NSL  KALKEAFVEFVN+DVGKFKNADL+ SFCDRILK GGEKL DAEV
Sbjct:  321 MGNEVINQREARMHEEGEKDTNQDPNFVKALLSLHDKFVGVVNAQFEKNSLFHKALKEAFVEFVNKDVGKFKNADLLSSFCDRILKKGGEKLGDAEV 417

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig103710.309.1 vs. uniprot

BLAST of mRNA_H-elongata_contig103710.309.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5KYW9_9PHAE	4.690e-54	96.88	CULLIN_2 domain-containing protein n=2 Tax=Ectocar...	[more]
W7TKB6_9STRA	6.190e-45	78.35	Cullin protein 1 n=1 Tax=Nannochloropsis gaditana ...	[more]
D7FJN2_ECTSI	1.400e-44	86.32	CULLIN_2 domain-containing protein n=1 Tax=Ectocar...	[more]
A0A835YLK2_9STRA	2.430e-44	83.16	Cullin n=1 Tax=Tribonema minus TaxID=303371 RepID=...	[more]
F0XVV7_AURAN	8.730e-44	81.25	CULLIN_2 domain-containing protein n=1 Tax=Aureoco...	[more]
A0A7S3JSF7_9STRA	1.540e-41	78.13	Hypothetical protein n=1 Tax=Aureoumbra lagunensis...	[more]
A0A7S3ZYF8_9STRA	6.890e-41	76.04	Hypothetical protein n=1 Tax=Pelagomonas calceolat...	[more]
A0A7S3UPV7_HETAK	5.220e-40	77.08	Hypothetical protein (Fragment) n=1 Tax=Heterosigm...	[more]
A0A8J2SP16_9STRA	6.660e-40	76.04	Hypothetical protein n=1 Tax=Pelagomonas calceolat...	[more]
A0A4D9DID3_9STRA	6.860e-40	77.32	CULLIN_2 domain-containing protein n=3 Tax=Monodop...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001373	Cullin, N-terminal	PFAM	PF00888	Cullin	coord: 4..96 e-value: 2.3E-15 score: 56.3
None	No IPR available	GENE3D	1.20.1310.10		coord: 1..73 e-value: 8.1E-14 score: 53.4
None	No IPR available	PANTHER	PTHR11932	CULLIN	coord: 19..94
None	No IPR available	PANTHER	PTHR11932:SF145		coord: 19..94
IPR016159	Cullin repeat-like-containing domain superfamily	SUPERFAMILY	74788	Cullin repeat-like	coord: 19..65

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig103710	contig	H-elongata_contig103710:851..2004 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig103710.309.1	mRNA_H-elongata_contig103710.309.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig103710 851..2007 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig103710.309.1 ID=prot_H-elongata_contig103710.309.1|Name=mRNA_H-elongata_contig103710.309.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=96bp
MGNEIIKRREAKIEGGEKDTNQDPNFVKELLALHDKYMAVVNEQFAGNSL
LQKALKEAFVEFVNRDVGKFKNADLMCSFCDRILKTGGEKLSDAEV

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001373	Cullin_N
IPR016159	Cullin_repeat-like_dom_sf