prot_H-elongata_contig1449.3081.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig1449.3081.1
Unique Nameprot_H-elongata_contig1449.3081.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length78
Homology
BLAST of mRNA_H-elongata_contig1449.3081.1 vs. uniprot
Match: D7FRY5_ECTSI (1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase, chloroplast n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRY5_ECTSI)

HSP 1 Score: 129 bits (323), Expect = 5.180e-33
Identity = 65/78 (83.33%), Postives = 72/78 (92.31%), Query Frame = 0
Query:    1 MTTTDTNDVEATVAQVIKCADAGADLVRITVQGKREARACKKIREMLDEKGYDVPLVADIHFQPAVALEVAEALEKIR 78
            MTTT+TNDV+ATVAQVIKCADAGADLVRITVQGKREA++CK IRE L+E GYDVPLVADIHFQP VA++VAE  EKIR
Sbjct:   53 MTTTNTNDVDATVAQVIKCADAGADLVRITVQGKREAKSCKLIREKLNELGYDVPLVADIHFQPKVAMDVAEVFEKIR 130          
BLAST of mRNA_H-elongata_contig1449.3081.1 vs. uniprot
Match: A0A7S3QZ12_DUNTE (Hypothetical protein n=1 Tax=Dunaliella tertiolecta TaxID=3047 RepID=A0A7S3QZ12_DUNTE)

HSP 1 Score: 125 bits (313), Expect = 1.270e-31
Identity = 64/78 (82.05%), Postives = 71/78 (91.03%), Query Frame = 0
Query:    1 MTTTDTNDVEATVAQVIKCADAGADLVRITVQGKREARACKKIREMLDEKGYDVPLVADIHFQPAVALEVAEALEKIR 78
            MTTTDT DVEATVAQV KCADAGADLVRITVQG+REA+AC++IR+ L + GYDVPLVADIHFQPAVA+ VAEA EKIR
Sbjct:   85 MTTTDTKDVEATVAQVKKCADAGADLVRITVQGRREAKACQEIRQRLFQDGYDVPLVADIHFQPAVAMMVAEAFEKIR 162          
BLAST of mRNA_H-elongata_contig1449.3081.1 vs. uniprot
Match: A0A0D2KI61_9CHLO (Uncharacterized protein n=1 Tax=Monoraphidium neglectum TaxID=145388 RepID=A0A0D2KI61_9CHLO)

HSP 1 Score: 115 bits (287), Expect = 1.540e-31
Identity = 58/78 (74.36%), Postives = 65/78 (83.33%), Query Frame = 0
Query:    1 MTTTDTNDVEATVAQVIKCADAGADLVRITVQGKREARACKKIREMLDEKGYDVPLVADIHFQPAVALEVAEALEKIR 78
            MTTTDT DV  TV QV +CADAGAD+VRITVQG+REA AC KIRE L + GYD PLVADIHFQPAVA+ VAEA EK++
Sbjct:    1 MTTTDTRDVAKTVEQVKRCADAGADIVRITVQGRREAEACMKIREQLFKDGYDTPLVADIHFQPAVAMMVAEAFEKVK 78          
BLAST of mRNA_H-elongata_contig1449.3081.1 vs. uniprot
Match: A0A383W8H6_TETOB (Uncharacterized protein n=3 Tax=Scenedesmaceae TaxID=3086 RepID=A0A383W8H6_TETOB)

HSP 1 Score: 122 bits (305), Expect = 1.540e-30
Identity = 63/78 (80.77%), Postives = 68/78 (87.18%), Query Frame = 0
Query:    1 MTTTDTNDVEATVAQVIKCADAGADLVRITVQGKREARACKKIREMLDEKGYDVPLVADIHFQPAVALEVAEALEKIR 78
            MTTTDT DV ATVAQV KCADAGAD+VRITVQG++EA AC KIRE L + GYDVPLVADIHFQPAVA+ VAEA EKIR
Sbjct:   88 MTTTDTRDVAATVAQVKKCADAGADIVRITVQGRKEAEACMKIREQLFKDGYDVPLVADIHFQPAVAMMVAEAFEKIR 165          
BLAST of mRNA_H-elongata_contig1449.3081.1 vs. uniprot
Match: A0A7S3DNF7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S3DNF7_9STRA)

HSP 1 Score: 114 bits (284), Expect = 2.550e-30
Identity = 58/78 (74.36%), Postives = 66/78 (84.62%), Query Frame = 0
Query:    1 MTTTDTNDVEATVAQVIKCADAGADLVRITVQGKREARACKKIREMLDEKGYDVPLVADIHFQPAVALEVAEALEKIR 78
            M TTDT DVEAT+ QV++CAD G DLVRITVQGKREA AC KIRE L +KGYD+PL AD+HFQP VA+ VAEA+EKIR
Sbjct:   99 MATTDTADVEATMEQVMRCADKGFDLVRITVQGKREANACLKIREGLFKKGYDIPLCADMHFQPKVAIAVAEAVEKIR 176          
BLAST of mRNA_H-elongata_contig1449.3081.1 vs. uniprot
Match: A0A250WQP3_9CHLO (Uncharacterized protein n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250WQP3_9CHLO)

HSP 1 Score: 121 bits (303), Expect = 2.710e-30
Identity = 62/78 (79.49%), Postives = 68/78 (87.18%), Query Frame = 0
Query:    1 MTTTDTNDVEATVAQVIKCADAGADLVRITVQGKREARACKKIREMLDEKGYDVPLVADIHFQPAVALEVAEALEKIR 78
            MTTTDT D+EATVAQV KCADAGAD+VRITVQGK+EA+AC  IR  L E GYDVPLVADIHFQPAVA+ VAE+ EKIR
Sbjct:   37 MTTTDTRDIEATVAQVKKCADAGADIVRITVQGKKEAQACADIRRRLFEDGYDVPLVADIHFQPAVAMMVAESFEKIR 114          
BLAST of mRNA_H-elongata_contig1449.3081.1 vs. uniprot
Match: A0A059LG22_9CHLO (GcpE (Fragment) n=1 Tax=Helicosporidium sp. ATCC 50920 TaxID=1291522 RepID=A0A059LG22_9CHLO)

HSP 1 Score: 115 bits (288), Expect = 5.310e-30
Identity = 59/78 (75.64%), Postives = 66/78 (84.62%), Query Frame = 0
Query:    1 MTTTDTNDVEATVAQVIKCADAGADLVRITVQGKREARACKKIREMLDEKGYDVPLVADIHFQPAVALEVAEALEKIR 78
            MTT+DT DVEATVAQV +CADAGA+LVRITVQGK+EA AC KIRE L +  YD PLVADIHFQP VA+ VA+A EKIR
Sbjct:   68 MTTSDTRDVEATVAQVKRCADAGAELVRITVQGKKEAAACMKIRERLFQDNYDTPLVADIHFQPGVAMAVADAFEKIR 145          
BLAST of mRNA_H-elongata_contig1449.3081.1 vs. uniprot
Match: A0A061S1H7_9CHLO ((E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase n=2 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061S1H7_9CHLO)

HSP 1 Score: 117 bits (292), Expect = 8.930e-29
Identity = 59/78 (75.64%), Postives = 68/78 (87.18%), Query Frame = 0
Query:    1 MTTTDTNDVEATVAQVIKCADAGADLVRITVQGKREARACKKIREMLDEKGYDVPLVADIHFQPAVALEVAEALEKIR 78
            MTTTDT DV+ATV QV+KCADAGAD+VRITVQG+REA AC +IRE L +  Y++PLVADIHFQPAVAL VA+A EKIR
Sbjct:   84 MTTTDTRDVQATVDQVMKCADAGADMVRITVQGRREAEACCEIRERLFKHNYEIPLVADIHFQPAVALRVADAFEKIR 161          
BLAST of mRNA_H-elongata_contig1449.3081.1 vs. uniprot
Match: A0A2P6V0A4_9CHLO (Adenylate kinase isoenzyme 6 homolog n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6V0A4_9CHLO)

HSP 1 Score: 115 bits (289), Expect = 2.350e-28
Identity = 60/78 (76.92%), Postives = 66/78 (84.62%), Query Frame = 0
Query:    1 MTTTDTNDVEATVAQVIKCADAGADLVRITVQGKREARACKKIREMLDEKGYDVPLVADIHFQPAVALEVAEALEKIR 78
            MTTTDT DVEATV QV KCADAGAD+VRITVQGK+EA AC KIR+ L +  YDVPLVADIHFQP VA+ VA+A EKIR
Sbjct:  595 MTTTDTRDVEATVEQVKKCADAGADIVRITVQGKKEAEACGKIRDRLFQDKYDVPLVADIHFQPQVAMMVADAFEKIR 672          
BLAST of mRNA_H-elongata_contig1449.3081.1 vs. uniprot
Match: A0A0H3V8D4_HAELA (1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase n=2 Tax=Haematococcus lacustris TaxID=44745 RepID=A0A0H3V8D4_HAELA)

HSP 1 Score: 115 bits (288), Expect = 3.010e-28
Identity = 59/78 (75.64%), Postives = 66/78 (84.62%), Query Frame = 0
Query:    1 MTTTDTNDVEATVAQVIKCADAGADLVRITVQGKREARACKKIREMLDEKGYDVPLVADIHFQPAVALEVAEALEKIR 78
            MTTTDT DV+ TV QV KCADAGADLVRITVQG++EA AC +IRE L +  YDVPLVADIHFQPAVA+ VAEA EK+R
Sbjct:   42 MTTTDTRDVQGTVDQVKKCADAGADLVRITVQGRKEAEACMRIREQLFKDRYDVPLVADIHFQPAVAMMVAEAFEKVR 119          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig1449.3081.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FRY5_ECTSI5.180e-3383.331-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate syn... [more]
A0A7S3QZ12_DUNTE1.270e-3182.05Hypothetical protein n=1 Tax=Dunaliella tertiolect... [more]
A0A0D2KI61_9CHLO1.540e-3174.36Uncharacterized protein n=1 Tax=Monoraphidium negl... [more]
A0A383W8H6_TETOB1.540e-3080.77Uncharacterized protein n=3 Tax=Scenedesmaceae Tax... [more]
A0A7S3DNF7_9STRA2.550e-3074.36Hypothetical protein (Fragment) n=1 Tax=Amphiprora... [more]
A0A250WQP3_9CHLO2.710e-3079.49Uncharacterized protein n=1 Tax=Chlamydomonas eust... [more]
A0A059LG22_9CHLO5.310e-3075.64GcpE (Fragment) n=1 Tax=Helicosporidium sp. ATCC 5... [more]
A0A061S1H7_9CHLO8.930e-2975.64(E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synth... [more]
A0A2P6V0A4_9CHLO2.350e-2876.92Adenylate kinase isoenzyme 6 homolog n=1 Tax=Micra... [more]
A0A0H3V8D4_HAELA3.010e-2875.641-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate syn... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR0045884-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-typePFAMPF04551GcpEcoord: 1..78
e-value: 4.1E-27
score: 95.2
IPR0045884-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-typePANTHERPTHR304544-HYDROXY-3-METHYLBUT-2-EN-1-YL DIPHOSPHATE SYNTHASEcoord: 1..78
IPR011005Dihydropteroate synthase-likeGENE3D3.20.20.20coord: 1..78
e-value: 1.9E-29
score: 105.1
NoneNo IPR availablePANTHERPTHR30454:SF14-HYDROXY-3-METHYLBUT-2-EN-1-YL DIPHOSPHATE SYNTHASE (FERREDOXIN), CHLOROPLASTICcoord: 1..78
IPR036849Enolase-like, C-terminal domain superfamilySUPERFAMILY51604Enolase C-terminal domain-likecoord: 4..76

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig1449contigH-elongata_contig1449:8290..9978 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig1449.3081.1mRNA_H-elongata_contig1449.3081.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig1449 8290..9978 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig1449.3081.1 ID=prot_H-elongata_contig1449.3081.1|Name=mRNA_H-elongata_contig1449.3081.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=78bp
MTTTDTNDVEATVAQVIKCADAGADLVRITVQGKREARACKKIREMLDEK
GYDVPLVADIHFQPAVALEVAEALEKIR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004588IspG_bac-typ
IPR011005Dihydropteroate_synth-like
IPR036849Enolase-like_C_sf