prot_H-elongata_contig144882.3079.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig144882.3079.1
Unique Nameprot_H-elongata_contig144882.3079.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length93
Homology
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BLAST of mRNA_H-elongata_contig144882.3079.1 vs. uniprot
Match: D7FGQ0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FGQ0_ECTSI)

HSP 1 Score: 154 bits (390), Expect = 2.160e-45
Identity = 70/92 (76.09%), Postives = 82/92 (89.13%), Query Frame = 0 
Query:    1 VTLGPLLLSLGVNIFNRINSVDGPCPVCGVPLQGLKNAQNQCPSCGTMLVTENGKFEPLGSGYVRDEAGTQQKFSRTGDSGVIDVDAIDVDD 92
            +T+GP+L S G+N++NRIN VD PCPVCGV LQGLKN QNQCPSCG ML+ ++GKFE +GSGYVRDEAGTQ++FSR GDSGVIDVDAIDVDD
Sbjct:  145 ITVGPILFSAGLNLYNRINLVDAPCPVCGVDLQGLKNKQNQCPSCGAMLLAKDGKFEAVGSGYVRDEAGTQREFSRMGDSGVIDVDAIDVDD 236
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig144882.3079.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FGQ0_ECTSI2.160e-4576.09Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig144882contigH-elongata_contig144882:747..1621 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig144882.3079.1mRNA_H-elongata_contig144882.3079.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig144882 747..1621 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig144882.3079.1 ID=prot_H-elongata_contig144882.3079.1|Name=mRNA_H-elongata_contig144882.3079.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=93bp
VTLGPLLLSLGVNIFNRINSVDGPCPVCGVPLQGLKNAQNQCPSCGTMLV
TENGKFEPLGSGYVRDEAGTQQKFSRTGDSGVIDVDAIDVDD*
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