prot_H-elongata_contig144698.3072.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig144698.3072.1
Unique Nameprot_H-elongata_contig144698.3072.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length60
Homology
BLAST of mRNA_H-elongata_contig144698.3072.1 vs. uniprot
Match: A0A7S2VCD5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2VCD5_9STRA)

HSP 1 Score: 95.5 bits (236), Expect = 9.500e-24
Identity = 46/59 (77.97%), Postives = 53/59 (89.83%), Query Frame = 0
Query:    2 LTWVSQVVGGVTPKKGGTTHLGQPVFNTVAEAKEAVNPDASVIYVPPPFAASAVLDAIE 60
            + + + +VGGVTPKKGGT HLG PVFNTVAEAKEAV PDASVIYVPPPFAA+A++DAIE
Sbjct:   50 IEYGTNMVGGVTPKKGGTEHLGLPVFNTVAEAKEAVQPDASVIYVPPPFAANAIIDAIE 108          
BLAST of mRNA_H-elongata_contig144698.3072.1 vs. uniprot
Match: D7FJ40_ECTSI (Succinate--CoA ligase [ADP-forming] subunit alpha, mitochondrial n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FJ40_ECTSI)

HSP 1 Score: 96.7 bits (239), Expect = 1.250e-22
Identity = 47/59 (79.66%), Postives = 52/59 (88.14%), Query Frame = 0
Query:    2 LTWVSQVVGGVTPKKGGTTHLGQPVFNTVAEAKEAVNPDASVIYVPPPFAASAVLDAIE 60
            + + SQ VGGVTPKKGG THLG+PVFNTVAEAKE V PDASV+YVPPPFA +AVLDAIE
Sbjct:   53 IEYGSQYVGGVTPKKGGQTHLGKPVFNTVAEAKEGVKPDASVVYVPPPFAGAAVLDAIE 111          
BLAST of mRNA_H-elongata_contig144698.3072.1 vs. uniprot
Match: L1JR66_GUITC (Succinate--CoA ligase [ADP-forming] subunit alpha, mitochondrial n=3 Tax=Geminigeraceae TaxID=589343 RepID=L1JR66_GUITC)

HSP 1 Score: 94.0 bits (232), Expect = 9.120e-22
Identity = 46/60 (76.67%), Postives = 52/60 (86.67%), Query Frame = 0
Query:    1 NLTWVSQVVGGVTPKKGGTTHLGQPVFNTVAEAKEAVNPDASVIYVPPPFAASAVLDAIE 60
            ++ + +++VGGVTPKKGGTTHLG PVFNTV EAKEAV PDASVIYVPPPFA  A LDAIE
Sbjct:   32 SIAYGTKMVGGVTPKKGGTTHLGLPVFNTVREAKEAVKPDASVIYVPPPFAMRAALDAIE 91          
BLAST of mRNA_H-elongata_contig144698.3072.1 vs. uniprot
Match: A0A662X9H2_9STRA (CoA_binding domain-containing protein (Fragment) n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662X9H2_9STRA)

HSP 1 Score: 85.5 bits (210), Expect = 3.200e-20
Identity = 40/59 (67.80%), Postives = 50/59 (84.75%), Query Frame = 0
Query:    2 LTWVSQVVGGVTPKKGGTTHLGQPVFNTVAEAKEAVNPDASVIYVPPPFAASAVLDAIE 60
            + + + +VGGVTPKKGGTTHLG PVFNTVAEAK+    DASVIYVPPPF A+++++AIE
Sbjct:   52 IEYGTNMVGGVTPKKGGTTHLGLPVFNTVAEAKKETGADASVIYVPPPFCAASIIEAIE 110          
BLAST of mRNA_H-elongata_contig144698.3072.1 vs. uniprot
Match: A0A024GKK8_9STRA (Succinate--CoA ligase [ADP-forming] subunit alpha, mitochondrial n=3 Tax=Albugo TaxID=65356 RepID=A0A024GKK8_9STRA)

HSP 1 Score: 90.1 bits (222), Expect = 3.660e-20
Identity = 42/59 (71.19%), Postives = 52/59 (88.14%), Query Frame = 0
Query:    2 LTWVSQVVGGVTPKKGGTTHLGQPVFNTVAEAKEAVNPDASVIYVPPPFAASAVLDAIE 60
            +++ +++VGGVTPKKGG+THLG PVFNTV+EAK A N DASVIYVPPPF A A++DAIE
Sbjct:   54 ISYGTKMVGGVTPKKGGSTHLGLPVFNTVSEAKRATNADASVIYVPPPFCAQAIIDAIE 112          
BLAST of mRNA_H-elongata_contig144698.3072.1 vs. uniprot
Match: A0A7S4UK23_9STRA (Succinate--CoA ligase [ADP-forming] subunit alpha, mitochondrial n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4UK23_9STRA)

HSP 1 Score: 89.4 bits (220), Expect = 6.860e-20
Identity = 43/59 (72.88%), Postives = 49/59 (83.05%), Query Frame = 0
Query:    2 LTWVSQVVGGVTPKKGGTTHLGQPVFNTVAEAKEAVNPDASVIYVPPPFAASAVLDAIE 60
            + + + +VGGVTPKKGG THLG PVFNTVAEA E V PDASVIYVPPPF A A++DAIE
Sbjct:   59 IEYGTNMVGGVTPKKGGQTHLGLPVFNTVAEAVEGVQPDASVIYVPPPFCAGAIMDAIE 117          
BLAST of mRNA_H-elongata_contig144698.3072.1 vs. uniprot
Match: A0A6U3SMJ6_9STRA (Succinate--CoA ligase [ADP-forming] subunit alpha, mitochondrial n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3SMJ6_9STRA)

HSP 1 Score: 89.4 bits (220), Expect = 7.370e-20
Identity = 43/59 (72.88%), Postives = 49/59 (83.05%), Query Frame = 0
Query:    2 LTWVSQVVGGVTPKKGGTTHLGQPVFNTVAEAKEAVNPDASVIYVPPPFAASAVLDAIE 60
            + + + +VGGVTPKKGG THLG PVFNTVAEA E V PDASVIYVPPPF A A++DAIE
Sbjct:   59 IEYGTNMVGGVTPKKGGQTHLGLPVFNTVAEAVEGVQPDASVIYVPPPFCAGAIMDAIE 117          
BLAST of mRNA_H-elongata_contig144698.3072.1 vs. uniprot
Match: A0A7S2LEI1_9STRA (Succinate--CoA ligase [ADP-forming] subunit alpha, mitochondrial n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2LEI1_9STRA)

HSP 1 Score: 89.4 bits (220), Expect = 7.370e-20
Identity = 43/59 (72.88%), Postives = 49/59 (83.05%), Query Frame = 0
Query:    2 LTWVSQVVGGVTPKKGGTTHLGQPVFNTVAEAKEAVNPDASVIYVPPPFAASAVLDAIE 60
            + + +Q+VGGVTPKKGG  HLG PVFNTVAEA E V PDASVIYVPPPF A A++DAIE
Sbjct:   56 IAYGTQMVGGVTPKKGGQEHLGLPVFNTVAEAVEGVQPDASVIYVPPPFCAKAIMDAIE 114          
BLAST of mRNA_H-elongata_contig144698.3072.1 vs. uniprot
Match: A0A067BXC0_SAPPC (Succinate--CoA ligase [ADP-forming] subunit alpha, mitochondrial n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067BXC0_SAPPC)

HSP 1 Score: 88.6 bits (218), Expect = 1.230e-19
Identity = 42/59 (71.19%), Postives = 50/59 (84.75%), Query Frame = 0
Query:    2 LTWVSQVVGGVTPKKGGTTHLGQPVFNTVAEAKEAVNPDASVIYVPPPFAASAVLDAIE 60
            + + + +VGGVTPKKGGTTHLG PVFNTVAEAK+    DASVIYVPPPF A+A++DAIE
Sbjct:   44 IAYGTNMVGGVTPKKGGTTHLGLPVFNTVAEAKKETQADASVIYVPPPFCAAAIIDAIE 102          
BLAST of mRNA_H-elongata_contig144698.3072.1 vs. uniprot
Match: A0A7S0WCJ8_9CRYP (Succinate--CoA ligase [ADP-forming] subunit alpha, mitochondrial n=2 Tax=Hemiselmis TaxID=77924 RepID=A0A7S0WCJ8_9CRYP)

HSP 1 Score: 88.6 bits (218), Expect = 1.350e-19
Identity = 42/59 (71.19%), Postives = 49/59 (83.05%), Query Frame = 0
Query:    2 LTWVSQVVGGVTPKKGGTTHLGQPVFNTVAEAKEAVNPDASVIYVPPPFAASAVLDAIE 60
            + + + +VGGVTPKKGGTTHLG PVFN + EAK AVNPDAS IYVPPPFA +A +DAIE
Sbjct:   50 IAYGTNMVGGVTPKKGGTTHLGLPVFNNMKEAKAAVNPDASAIYVPPPFAGAACIDAIE 108          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig144698.3072.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S2VCD5_9STRA9.500e-2477.97Hypothetical protein (Fragment) n=1 Tax=Amphiprora... [more]
D7FJ40_ECTSI1.250e-2279.66Succinate--CoA ligase [ADP-forming] subunit alpha,... [more]
L1JR66_GUITC9.120e-2276.67Succinate--CoA ligase [ADP-forming] subunit alpha,... [more]
A0A662X9H2_9STRA3.200e-2067.80CoA_binding domain-containing protein (Fragment) n... [more]
A0A024GKK8_9STRA3.660e-2071.19Succinate--CoA ligase [ADP-forming] subunit alpha,... [more]
A0A7S4UK23_9STRA6.860e-2072.88Succinate--CoA ligase [ADP-forming] subunit alpha,... [more]
A0A6U3SMJ6_9STRA7.370e-2072.88Succinate--CoA ligase [ADP-forming] subunit alpha,... [more]
A0A7S2LEI1_9STRA7.370e-2072.88Succinate--CoA ligase [ADP-forming] subunit alpha,... [more]
A0A067BXC0_SAPPC1.230e-1971.19Succinate--CoA ligase [ADP-forming] subunit alpha,... [more]
A0A7S0WCJ8_9CRYP1.350e-1971.19Succinate--CoA ligase [ADP-forming] subunit alpha,... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003781CoA-bindingPFAMPF02629CoA_bindingcoord: 7..60
e-value: 6.7E-16
score: 58.8
NoneNo IPR availableGENE3D3.40.50.720coord: 2..60
e-value: 3.1E-19
score: 71.3
NoneNo IPR availablePANTHERPTHR11117SUCCINYL-COA LIGASE SUBUNIT ALPHAcoord: 3..60
IPR036291NAD(P)-binding domain superfamilySUPERFAMILY51735NAD(P)-binding Rossmann-fold domainscoord: 7..60

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig144698contigH-elongata_contig144698:101..280 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig144698.3072.1mRNA_H-elongata_contig144698.3072.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig144698 101..280 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig144698.3072.1 ID=prot_H-elongata_contig144698.3072.1|Name=mRNA_H-elongata_contig144698.3072.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=60bp
NLTWVSQVVGGVTPKKGGTTHLGQPVFNTVAEAKEAVNPDASVIYVPPPF
AASAVLDAIE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003781CoA-bd
IPR036291NAD(P)-bd_dom_sf