mRNA_H-elongata_contig14450.3054.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig14450.3054.1
Unique NamemRNA_H-elongata_contig14450.3054.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig14450.3054.1 vs. uniprot
Match: D7FLF9_ECTSI (Flap endonuclease 1 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FLF9_ECTSI)

HSP 1 Score: 639 bits (1647), Expect = 1.920e-220
Identity = 360/473 (76.11%), Postives = 389/473 (82.24%), Query Frame = 1
Query:    1 MGITGLTKLLSDEAPNCMKEIDLDSLTGRKVAIDASMAMYQFLIAVRSGGEGQAHMLTNEAGEVTSHIQGMFNRTIRMLSKGVKPCYIFDGKPPDLKGGELAKRKEKRTKAEADLKNATEADEKSEIDKFSRRLVRVTSEHNEDCKTLLRLMGVPVFTAPSEAEAQCAALAREGVVYGAATEDMDSLTFKTPKLLRRMTFSGAQQPILEVDYTKLLQGLDLSHEKFVDLCILCGCDYTGSIKGIGPKKALAFVRQHGTIEEIIKHLDPTKYPLPDDWLEPSERAKKRKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-------------------------VKENSASSTKRERDEDRNEDCEDELDDTPPMYRQARKLFLKPEVKSAGEIKLKWTDPDETRLVKFLVEEKGFNAERVASGITKLKAARKNVSQKRMDSFFSVVPHQNGRAKKLASKEKDATRAKGKG 1344
            MGI GLTKLLSDEAPNCMKE+DLDSLTGRKVA+DASMAMYQFLIAVRSGGEGQ+ MLTNEAGEVTSHIQGMFNRTIRMLSKGVKPCYIFDGKPP LKGGELAKR  KR KAEA+LK ATEAD+K+++DKFS+RLVRVT +HNEDCK LL LMGVPV TAPSEAEAQCAALAREGVVYG ATEDMD+LTF+TPKLLRRMTFSG+ QPILEVDY KLLQGL+LSHEKFVDLC+LCGCDYTGSIKGIGPKKALA VRQHGTIEEIIKHLD  KYP+PDDWLEP+ERA++RKXXXXXXXXXXXXXXXXXXXXX                                      KE +  S KRER+ +   + E E+DDTPPMYRQAR LFLKPEV+ AGE KLKWTDPDE  L+KFLVEEKGFNAERVASGI KLK ARKNVSQKRMDSFFSV+P+ N  AKK A K K   + K  G
Sbjct:    1 MGIHGLTKLLSDEAPNCMKEVDLDSLTGRKVAVDASMAMYQFLIAVRSGGEGQSQMLTNEAGEVTSHIQGMFNRTIRMLSKGVKPCYIFDGKPPQLKGGELAKRTAKRAKAEAELKVATEADDKNDVDKFSKRLVRVTRDHNEDCKKLLSLMGVPVVTAPSEAEAQCAALAREGVVYGTATEDMDALTFQTPKLLRRMTFSGSNQPILEVDYQKLLQGLELSHEKFVDLCVLCGCDYTGSIKGIGPKKALALVRQHGTIEEIIKHLDAKKYPVPDDWLEPAERAERRKXXXXXXXXXXXXXXXXXXXXXAETANPEAVSEEDVQQKEGDSDSDKAKADTPDHGVSVAKEAADVSAKRERETEDAAESEQEMDDTPPMYRQARGLFLKPEVEPAGEYKLKWTDPDEPGLIKFLVEEKGFNAERVASGIVKLKGARKNVSQKRMDSFFSVIPNPNAGAKKPAPKAKAGAKGKAGG 473          
BLAST of mRNA_H-elongata_contig14450.3054.1 vs. uniprot
Match: A0A835Z748_9STRA (Flap endonuclease 1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z748_9STRA)

HSP 1 Score: 447 bits (1150), Expect = 1.040e-145
Identity = 282/439 (64.24%), Postives = 331/439 (75.40%), Query Frame = 1
Query:    1 MGITGLTKLLSDEAPNCMKEIDLDSLTGRKVAIDASMAMYQFLIAVRSGGEG-QAHMLTNEAGEVTSHIQGMFNRTIRMLSKGVKPCYIFDGKPPDLKGGELAKRKEKRTKAEADLKNATEADEKSEIDKFSRRLVRVTSEHNEDCKTLLRLMGVPVFTAPSEAEAQCAALAREGVVYGAATEDMDSLTFKTPKLLRRMTFSGAQQPILEVDYTKLLQGLDLSHEKFVDLCILCGCDYTGSIKGIGPKKALAFVRQHGTIEEIIKHLDPTKYPLPDDWLE---PSERAKKRKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVKENSASSTKRERDEDRNEDC---------EDELDDTPPMYRQARKLFLKPEVKSAGEIKLKWTDPDETRLVKFLVEEKGFNAERVASGITKLKAARKNVSQKRMDSFF-SVVP 1275
            MGI GLTKLL+DE PNC+KE DL+SLTGRK+AIDASMAMYQFLIAVRSG EG  A MLTNEAGEVTSHIQGMFNRTI++L+ G+KP Y+FDGKPP LKGGELAKR  KR KAE D ++A E     ++DKFS+RLVRVT++HNEDCKTLLRLMGVPV  A  EAEAQCAALAR+GVV+G  TEDMD+LTF+TPKL+RR+T +   QPI+EVDY  +L+GL L+HE+FVD+CILCGCDYT SI+GIGPKKAL  +++H +IEEI+KHLD +K+ +P DW+    P+  AK   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                              E    D  PMY++AR+LFL+P+V  A    LKWTDP+   L  FLVE+  FNAERVA+GI KLK ARK   Q RMD+FF S  P
Sbjct:    1 MGIQGLTKLLNDECPNCIKEYDLNSLTGRKIAIDASMAMYQFLIAVRSGSEGVAATMLTNEAGEVTSHIQGMFNRTIKLLTSGLKPVYVFDGKPPTLKGGELAKRAAKRVKAETDWQDARENGTTEDVDKFSKRLVRVTTQHNEDCKTLLRLMGVPVVDASCEAEAQCAALARDGVVFGTGTEDMDALTFRTPKLIRRLT-TNKNQPIMEVDYAGVLEGLGLTHEEFVDMCILCGCDYTDSIRGIGPKKALMLIKKHHSIEEILKHLDRSKHGIPADWIPGETPTPLAKPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPAAPVVQEAVPADKIPMYKEARRLFLEPDVFPANTYDLKWTDPNVEELTTFLVEKMQFNAERVAAGIKKLKEARKKGGQTRMDTFFKSTAP 438          
BLAST of mRNA_H-elongata_contig14450.3054.1 vs. uniprot
Match: A0A7S2SD31_9STRA (Flap endonuclease 1 n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SD31_9STRA)

HSP 1 Score: 419 bits (1078), Expect = 5.920e-135
Identity = 254/468 (54.27%), Postives = 315/468 (67.31%), Query Frame = 1
Query:    1 MGITGLTKLLSDEAPNCMKEIDLDSLTGRKVAIDASMAMYQFLIAVRSGGEGQA--HMLTNEAGEVTSHIQGMFNRTIRMLSKGVKPCYIFDGKPPDLKGGELAKRKEKRTKAEADLKNATEADEKSEIDKFSRRLVRVTSEHNEDCKTLLRLMGVPVFTAPSEAEAQCAALAREGVVYGAATEDMDSLTFKTPKLLRRMTFSGAQQ-PILEVDYTKLLQGLDLSHEKFVDLCILCGCDYTGSIKGIGPKKALAFVRQHGTIEEIIKHLDPTKYPLPDDWLEPSER------AKKRKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVKENSASSTKRERDEDRNEDCEDELDDTPPMYRQARKLFLKPEVKSAGEIKLKWTDPDETRLVKFLVEEKGFNAERVASGITKLKAARKNVSQKRMDSFFSVVPHQNGRAKKLASKEKDATRAKGKGSAVTGKSKGKR 1377
            MGI GL  L++DEAP   KE D+ +L GRKVAIDASMA+YQFLIAVRS     A   MLTNEAGEVTSHIQG+FNRTIRML+ GVKPCY+FDGKPP LK GELAKR + RTKA+ +LK A E ++  +IDK+S+RLV+VT EHNED K LLRLMGVPV  AP EAEAQCAALA+ G+V+  ATEDMD+LTF+TP LL+RMTFS  QQ PI+++ + KLL GL ++ E+FVDLCILCGCDY     GIGPK AL  VR++G +E I+K+LD  K+PLP  W  P+ +      A    XXXXXXXXXXXXX                     K   A+S +  ++ ++ +  E       P++ + R+LF  P V+      LKWT+PDE  L+KFLVEEKGFNAERV+SGI KLK  +   +Q+RMDSFF            ++S ++ A  AK K S     SKGK+
Sbjct:   22 MGIHGLMNLVADEAPESCKEQDIKALVGRKVAIDASMALYQFLIAVRSAEHAGAVTQMLTNEAGEVTSHIQGLFNRTIRMLTNGVKPCYVFDGKPPTLKSGELAKRTKARTKAKEELKAAEEREDAEDIDKYSKRLVKVTREHNEDAKRLLRLMGVPVIEAPGEAEAQCAALAKAGLVWATATEDMDALTFQTPHLLKRMTFSAKQQAPIMQISHDKLLHGLGITQEQFVDLCILCGCDYCDRPSGIGPKTALKLVRKYGNLENIVKNLDKKKHPLPVGWERPAPKPADPAPAAXXXXXXXXXXXXXXXXSEGGSEVTHEENETDAQEPDAKPEPAASAETAQEPEKEQPWE-------PLFVEVRQLFHTPLVQDPVNCSLKWTEPDEEGLIKFLVEEKGFNAERVSSGIKKLKEMKGKGTQQRMDSFFKSTGM-------VSSSKRKAAPAKAKPSKKGKISKGKK 475          
BLAST of mRNA_H-elongata_contig14450.3054.1 vs. uniprot
Match: A0A1V9YW30_9STRA (Flap endonuclease 1 n=4 Tax=Saprolegniaceae TaxID=4764 RepID=A0A1V9YW30_9STRA)

HSP 1 Score: 390 bits (1003), Expect = 6.240e-125
Identity = 220/445 (49.44%), Postives = 280/445 (62.92%), Query Frame = 1
Query:    1 MGITGLTKLLSDEAPNCMKEIDLDSLTGRKVAIDASMAMYQFLIAVRSGGEG--QAHMLTNEAGEVTSHIQGMFNRTIRMLSKGVKPCYIFDGKPPDLKGGELAKRKEKRTKAEADLKNATEADEKSEIDKFSRRLVRVTSEHNEDCKTLLRLMGVPVFTAPSEAEAQCAALAREGVVYGAATEDMDSLTFKTPKLLRRMTFSGAQQ-PILEVDYTKLLQGLDLSHEKFVDLCILCGCDYTGSIKGIGPKKALAFVRQHGTIEEIIKHLD--PTK-YPLPDDWLEPSERAKKRKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVKENSASSTKRERDEDRNEDCEDELDDTPPMYRQARKLFLKPEVKSAGEIKLKWTDPDETRLVKFLVEEKGFNAERVASGITKLKAARKNVSQKRMDSFFSVVPHQNGRAKKLASKEK 1317
            MGI GL KLL+DEAP C+KE+ +  L+GR VAIDASMA+YQFLIAVRS G+G   A MLTNEAGEVTSHIQGMFNRTIR++  GVKP Y+FDGKPP +K GELAKR E+R +A+A LK ATE     +IDKF++RLVR T +HNEDCK LL LMG+P  TAP EAEA CAALA+ G V+ A TEDMD +TF TP L RR+T + +++ PILE+   K+LQ L+L++E+FVDLCILCGCDY  +I GIGPKKAL  +R+H +IE  + HL+  P+K   +P DWL                                                             ED          +Y+QAR +F+  EV    EI  KW +P    L  FLVE+ GFNA+RV +GI KLK A+ + SQ+R+++FF+V+P     AK+  + +K
Sbjct:    1 MGIKGLMKLLTDEAPTCVKELQMAQLSGRSVAIDASMALYQFLIAVRSNGDGGGTAQMLTNEAGEVTSHIQGMFNRTIRLMENGVKPVYVFDGKPPVMKSGELAKRTERRQEAQASLKTATEEGNTEDIDKFTKRLVRATPQHNEDCKELLGLMGIPFLTAPCEAEATCAALAKAGKVFAAGTEDMDVITFGTPVLFRRLTIAASRKLPILEIRLEKVLQELNLTYEQFVDLCILCGCDYCETIFGIGPKKALNAIREHKSIENFLAHLEKHPSKGVTVPHDWL------------------------------------------------------------GEDA---------IYKQARSMFINAEVSDTAEIDFKWKEPSVDELRAFLVEKHGFNADRVMNGIEKLKKAKTSHSQQRLENFFTVIPSSKDTAKRKGADDK 376          
BLAST of mRNA_H-elongata_contig14450.3054.1 vs. uniprot
Match: A0A6G0WCI0_9STRA (Flap endonuclease 1 n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WCI0_9STRA)

HSP 1 Score: 388 bits (997), Expect = 4.870e-124
Identity = 212/431 (49.19%), Postives = 276/431 (64.04%), Query Frame = 1
Query:    1 MGITGLTKLLSDEAPNCMKEIDLDSLTGRKVAIDASMAMYQFLIAVRSGGE--GQAHMLTNEAGEVTSHIQGMFNRTIRMLSKGVKPCYIFDGKPPDLKGGELAKRKEKRTKAEADLKNATEADEKSEIDKFSRRLVRVTSEHNEDCKTLLRLMGVPVFTAPSEAEAQCAALAREGVVYGAATEDMDSLTFKTPKLLRRMTFSGAQQ-PILEVDYTKLLQGLDLSHEKFVDLCILCGCDYTGSIKGIGPKKALAFVRQHGTIEEIIKHLD--PTK-YPLPDDWLEPSERAKKRKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVKENSASSTKRERDEDRNEDCEDELDDTPPMYRQARKLFLKPEVKSAGEIKLKWTDPDETRLVKFLVEEKGFNAERVASGITKLKAARKNVSQKRMDSFFSVVP 1275
            MGI GL KLL+DEAP C+KE+ + +L+GR VAIDASMA+YQFL+AVRS GE  G A MLTNEAGEVTSHIQGMFNRTIR++  G+KP Y+FDGKPP +K GELAKR E+R  A+ +LK ATE     +IDKF++RLVR T +HNEDCK LL+LMGVP   AP EAEA CAALA+   V+ + TEDMD +TF TP L RR+T + +++ PILE+   K+LQ L+L+HE+FVDLCILCGCDY  +I+GIGPKKAL+ +++H  IE  + HL   P+K   +PD+WL                                                             ED          +Y+QAR +F++P+V     +++KW DP    L +FLVE+ GFN+ERV + I KLK A+   SQ+R++SFF+V+P
Sbjct:    1 MGIKGLMKLLTDEAPGCVKELQMSALSGRSVAIDASMALYQFLVAVRSNGEHGGAAQMLTNEAGEVTSHIQGMFNRTIRLMENGLKPVYVFDGKPPVMKSGELAKRSERRQTAQENLKTATEEGNVEDIDKFNKRLVRATPQHNEDCKELLQLMGVPFINAPCEAEATCAALAKSNKVFASGTEDMDVMTFGTPVLFRRLTIAASRKLPILEIRLDKVLQELELTHEQFVDLCILCGCDYCDTIRGIGPKKALSAIKEHKNIETFVAHLQQHPSKGITVPDEWL------------------------------------------------------------GEDA---------IYKQARAMFIEPDVVDTSSVEIKWKDPSVEELRQFLVEKHGFNSERVMNAIEKLKKAKTTHSQQRLESFFTVLP 362          
BLAST of mRNA_H-elongata_contig14450.3054.1 vs. uniprot
Match: A0A0P4W461_SCYOL (Flap endonuclease 1 n=2 Tax=Portunidae TaxID=6757 RepID=A0A0P4W461_SCYOL)

HSP 1 Score: 387 bits (994), Expect = 7.930e-124
Identity = 207/449 (46.10%), Postives = 278/449 (61.92%), Query Frame = 1
Query:    1 MGITGLTKLLSDEAPNCMKEIDLDSLTGRKVAIDASMAMYQFLIAVRSGGEGQAHMLTNEAGEVTSHIQGMFNRTIRMLSKGVKPCYIFDGKPPDLKGGELAKRKEKRTKAEADLKNATEADEKSEIDKFSRRLVRVTSEHNEDCKTLLRLMGVPVFTAPSEAEAQCAALAREGVVYGAATEDMDSLTFKTPKLLRRMTFSGAQQ-PILEVDYTKLLQGLDLSHEKFVDLCILCGCDYTGSIKGIGPKKALAFVRQHGTIEEIIKHLDPTKYPLPDDWLEPSERAKKRKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVKENSASSTKRERDEDRNEDCEDELDDTPPMYRQARKLFLKPEVKSAGEIKLKWTDPDETRLVKFLVEEKGFNAERVASGITKLKAARKNVSQKRMDSFFSVVPHQNGRAKKLASKEKDATRAKGKG 1344
            MGI GL+KL++D AP+ +KE ++ +  GRKVA+DASM++YQFL+AVR  G+    MLT   GE TSH+ G F RTIRM+  G+KP Y+FDGKPP +KGGELAKRKE+R +A+  L+ A EA    +++KFSRRLV+VT  H E+ KTLLRLMG+P   AP EAEAQCAALA+ G VYG ATEDMD+LTF TP LLR MTFS A++ PI E   +++L+GL+L  E+F+D+CIL GCDY  SIKG+GPK+A+  +R H ++E ++K LDP KYP+P+DW                                                                           + +AR LF++PEV    +I+LKW++P E +LV+F+ EEKGF+ +R+ +GI KL  AR + +Q R+DSFF V+P  N  A K  S+EK     K +G
Sbjct:    1 MGILGLSKLIADVAPSAVKENEIKNFFGRKVAVDASMSLYQFLVAVRQEGQ----MLTTADGETTSHLMGFFYRTIRMVENGIKPVYVFDGKPPTMKGGELAKRKERREEAQKALEKAEEAGNAEDVEKFSRRLVKVTKTHTEEAKTLLRLMGIPYVEAPCEAEAQCAALAKAGKVYGVATEDMDALTFGTPILLRHMTFSEARKMPIKEFHLSRVLEGLELKQEEFIDMCILLGCDYCDSIKGVGPKRAIELIRSHKSLESVVKQLDPKKYPVPEDW--------------------------------------------------------------------------PFAEARNLFIEPEVTDPADIELKWSEPQEEKLVEFMCEEKGFSEDRIRNGIKKLTKARNSSTQGRLDSFFKVLPSPNNNANKRKSEEKPGAAKKARG 371          
BLAST of mRNA_H-elongata_contig14450.3054.1 vs. uniprot
Match: W4FTR5_9STRA (Flap endonuclease 1 n=2 Tax=Aphanomyces TaxID=100860 RepID=W4FTR5_9STRA)

HSP 1 Score: 387 bits (995), Expect = 8.440e-124
Identity = 217/462 (46.97%), Postives = 293/462 (63.42%), Query Frame = 1
Query:    1 MGITGLTKLLSDEAPNCMKEIDLDSLTGRKVAIDASMAMYQFLIAVRSGGE--GQAHMLTNEAGEVTSHIQGMFNRTIRMLSKGVKPCYIFDGKPPDLKGGELAKRKEKRTKAEADLKNATEADEKSEIDKFSRRLVRVTSEHNEDCKTLLRLMGVPVFTAPSEAEAQCAALAREGVVYGAATEDMDSLTFKTPKLLRRMTFSGAQQ-PILEVDYTKLLQGLDLSHEKFVDLCILCGCDYTGSIKGIGPKKALAFVRQHGTIEEIIKHLD--PTK-YPLPDDWLEPSERAKKRKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVKENSASSTKRERDEDRNEDCEDELDDTPPMYRQARKLFLKPEVKSAGEIKLKWTDPDETRLVKFLVEEKGFNAERVASGITKLKAARKNVSQKRMDSFFSVVPHQNGRAKKLASKEKDATRAKGKGSAVTGKSK 1368
            MGI GL KLL+DEAP C+KE+ + +L+GR VAIDASMA+YQFL+AVRS GE  G A MLTN+AG+VTSHIQGMFNRTIR++  G+KP Y+FDGKPP +KGGELAKR E+R  A+ +LK ATE     +I+KF++RLVR T +HN DCK LL LMGVP   AP EAEA CAALA+   V+ + TEDMD +TF TP L RR+T + +++ PILE+   K+L  L+LS+E+FVDLCILCGCDY  SI+G+GPKKAL+ +++H +IE  + HL   P+K   +PD+WL                                                             ED          +Y+QAR +FL+P+V    ++ +KW DP+   L +FLV++ GF+ +RV + I KLK A+ + SQ+RM+SFF+V+P  + + K+ A  +K A +AKG  +A  G+ K
Sbjct:    1 MGIKGLMKLLTDEAPGCVKELQMSALSGRSVAIDASMALYQFLVAVRSNGEHGGAAQMLTNDAGDVTSHIQGMFNRTIRLMENGLKPVYVFDGKPPVMKGGELAKRTERRQTAQDNLKTATEEGNVEDIEKFNKRLVRATPQHNNDCKELLALMGVPFINAPCEAEATCAALAKHNKVFASGTEDMDVMTFGTPVLFRRLTIAASRKLPILEIKLDKVLAELELSYEQFVDLCILCGCDYCDSIRGVGPKKALSAIKEHKSIENYVTHLQAHPSKGITVPDEWL------------------------------------------------------------GEDA---------IYKQARAMFLEPDVIDMADVDIKWKDPNVDDLRQFLVDKHGFSLDRVMNAIEKLKKAKTSHSQQRMESFFTVLPSSDSKLKRKAD-DKKAAKAKGTAAAKRGRKK 392          
BLAST of mRNA_H-elongata_contig14450.3054.1 vs. uniprot
Match: A0A6T7HKT1_9STRA (Flap endonuclease 1 n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A6T7HKT1_9STRA)

HSP 1 Score: 389 bits (999), Expect = 1.420e-123
Identity = 249/438 (56.85%), Postives = 299/438 (68.26%), Query Frame = 1
Query:    1 MGITGLTKLLSDEAPNCMKEIDLDSLTGRKVAIDASMAMYQFLIAVRSGGEGQ---AHMLTNEAGEVTSHIQGMFNRTIRMLSKGVKPCYIFDGKPPDLKGGELAKRKEKRTKAEADLKNATEADEKSEIDKFSRRLVRVTSEHNEDCKTLLRLMGVPVFTAPSEAEAQCAALAREGVVYGAATEDMDSLTFKTPKLLRRMTFSGAQQPILE-VDYTKLLQGLDLSHEKFVDLCILCGCDYTGSIKGIGPKKALAFVRQHGTIEEIIKHLDPTKYPLPDDWLEPSERAKKRKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVKENSASSTKRERDEDRNEDCEDELDDTPPMYRQARKLFLKPEVKSAGEIKLKWTDPDETRLVKFLVEEKGFNAERVASGITKL-KAARKNVS-QKRMDSFFSVVPHQNGRAK 1296
            MGI GL KLLSDEAP C++E+ L SL GRK+AIDASMA+YQFLIAVRS G      A MLTN  GE TSHIQG+FNRTIR LS+G++P Y+FDGKPP+LK GEL KR+EKR KA+  LKNA E     E DK S+RLVR  ++ NEDC  LL LMGVPV  AP EAEAQ +ALAR G VY  ATEDMD+LTF+TP LLR+MTF+ A +  ++ +DY K L+GLDL+H++FVDLCIL GCDY  SIKG+GPK AL  +R+H  IE I+KH+D  KY +PD W+    RA +++      XX    XXXXXXXXXXXXXXXXXXXXX                      +EL    P+Y +AR+LF + EV    ++ LKW       L KFLV+E GFNAERVA  I KL KA +K    Q RMDSFF+V P+ N  AK
Sbjct:    1 MGIKGLAKLLSDEAPECVREVPLSSLQGRKIAIDASMAIYQFLIAVRSSGNNPNMAAAMLTNAEGETTSHIQGLFNRTIRFLSEGIRPVYVFDGKPPNLKSGELVKRREKREKAQTALKNAQEDGNVEEQDKQSKRLVRAGTKENEDCIRLLNLMGVPVVRAPCEAEAQASALARAGTVYATATEDMDALTFRTPILLRKMTFANASKSDIQTMDYKKALEGLDLNHDQFVDLCILLGCDYCDSIKGVGPKTALKLIREHSDIETILKHIDRNKYTIPDAWIPNEARASEKEDQVKEEXXKAYNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----------XXEEL--LVPIYVEARRLFKEHEV--LEKVDLKWVPCQPEPLTKFLVDEMGFNAERVAKSIEKLTKALQKTCKPQARMDSFFTVKPNPNAAAK 424          
BLAST of mRNA_H-elongata_contig14450.3054.1 vs. uniprot
Match: FEN1_PHYIT (Flap endonuclease 1 n=24 Tax=Peronosporaceae TaxID=4777 RepID=FEN1_PHYIT)

HSP 1 Score: 387 bits (993), Expect = 1.510e-123
Identity = 221/465 (47.53%), Postives = 289/465 (62.15%), Query Frame = 1
Query:    1 MGITGLTKLLSDEAPNCMKEID-LDSLTGRKVAIDASMAMYQFLIAVRSG-GEGQAHMLTNEAGEVTSHIQGMFNRTIRMLSKGVKPCYIFDGKPPDLKGGELAKRKEKRTKAEADLKNATEADEKSEIDKFSRRLVRVTSEHNEDCKTLLRLMGVPVFTAPSEAEAQCAALAREGVVYGAATEDMDSLTFKTPKLLRRMTFSGAQQ-PILEVDYTKLLQGLDLSHEKFVDLCILCGCDYTGSIKGIGPKKALAFVRQHGTIEEIIKHLDPTKYP---LPDDWLEPSERAKKRKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVKENSASSTKRERDEDRNEDCEDELDDTPPMYRQARKLFLKPEVKSAGEIKLKWTDPDETRLVKFLVEEKGFNAERVASGITKLKAARKNVSQKRMDSFFSVVPHQNGRAKKLASKEKDATRAKGKGSAVTGKSKGKR 1377
            MGI GL KLL +EAP+C+KE++ + +L G  VAIDASMA+YQFLIA+RS  G G +  LTN  GEVTSH+QGMF+RTIRM+  G+KP Y+FDGKPP +K GELAKR ++R +A+  L+ ATE     +ID+F++RLVR T +HNEDCK LLRLMGVP  TAP EAEA CAALA+ G VY A TEDMD+LTF  P L RR+T S A++ PILE+   + LQ L+++HE+FVDLCILCGCDY  SI+G+GPKKA A +++H +IE  ++ L   K     +PD+WL  +                                                                     P+Y+ AR++F+KPEV  A E ++KW DP ET LV FLV++ GF  +RV S IT+LK ++   SQKR+DSFF+V+P  NG      +K++ A  AKG   A T K KGK+
Sbjct:    1 MGIKGLMKLLQEEAPSCIKEVEKMSALAGHAVAIDASMALYQFLIAIRSADGGGPSQALTNADGEVTSHLQGMFSRTIRMMENGLKPVYVFDGKPPVMKSGELAKRSDRRQEAQKALEEATEKGNAEDIDRFNKRLVRATPQHNEDCKELLRLMGVPHITAPCEAEASCAALAKGGRVYAAGTEDMDALTFGVPVLYRRLTVSPAKKIPILEIRLERALQELEMTHEQFVDLCILCGCDYCDSIRGVGPKKAYAGIKEHKSIENFLEVLQKNKSKGVVIPDEWLGEN---------------------------------------------------------------------PIYKNAREMFIKPEVVDAKETEIKWRDPQETELVDFLVKKHGFQEDRVLSAITRLKKSKSTQSQKRLDSFFTVMPSANG------AKKRKAPAAKGGKKAATAK-KGKK 389          
BLAST of mRNA_H-elongata_contig14450.3054.1 vs. uniprot
Match: A0A7S3KWM7_9STRA (Flap endonuclease 1 n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3KWM7_9STRA)

HSP 1 Score: 384 bits (987), Expect = 2.810e-122
Identity = 239/456 (52.41%), Postives = 292/456 (64.04%), Query Frame = 1
Query:    1 MGITGLTKLLSDEAPNCMKEIDLDSLTGRKVAIDASMAMYQFLIAVRSGGEGQ-AHMLTNEAGEVTSHIQGMFNRTIRMLSKGVKPCYIFDGKPPDLKGGELAKRKEKRTKAEADLKNATEADEKSEIDKFSRRLVRVTSEHNEDCKTLLRLMGVPVFTAPSEAEAQCAALAREGVVYGAATEDMDSLTFKTPKLLRRMTFSGAQQPILE-VDYTKLLQGLDLSHEKFVDLCILCGCDYTGSIKGIGPKKALAFVRQHGTIEEIIKHL-DPTKYPLPDDWLEPSERAKKRKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVKENSASSTKRERDEDRNEDCEDELDDTPPMYRQARKLFLKPEVKSAGEIKLKWTDPDETRLVKFLVEEKGFNAERVASGITKLKAA-RKNVS-QKRMDSFFSVVPHQNGRAKKLASKEKDATRAKGKGSAV 1353
            MGI GL+KLLSDEAP+ M+E++L SL GRK+AIDASMA+YQFLIAVRSGG  Q A MLTNE GE TSHIQGMFNRTIR +++G+KP ++FDGKPP  K GEL KR+EK       LK ATE     E DK S+RLVR   + NEDC+ LL LMGVPV  AP EAEAQ AALA+ G VY   TEDMD++TF TP L+R+M F+ A + +++ +DY K + GLDL+H++FVDLCIL GCDY  SIKG+GPK AL  +R+HG IE IIK + D  KY +PDDWL P++  KK       XXXXXXX                                          E+E ++  P Y QARKLF + EV    +++LKW    E  L KFLV+E+GFN ERV + I KL+AA +KN   Q RMD+FF V P    +    ASK K A  AKGK  AV
Sbjct:    1 MGIKGLSKLLSDEAPDSMREVELKSLHGRKIAIDASMAIYQFLIAVRSGGPNQQAVMLTNEQGETTSHIQGMFNRTIRFMTEGIKPVFVFDGKPPQFKNGELMKRREKXXXXXXXLKEATEEGNVEEQDKHSKRLVRAGHKENEDCRKLLTLMGVPVVIAPCEAEAQAAALAKAGKVYATGTEDMDAVTFATPILVRKMAFANASKSMVQTIDYAKAVNGLDLTHDQFVDLCILLGCDYCDSIKGVGPKTALKMIREHGCIENIIKEIGDNKKYGIPDDWL-PNKNQKKDADGEEKXXXXXXXG----------------------------------------VEEEDEEFIPTYVQARKLFNEHEV--VTDVELKWKPCQEEELTKFLVDEQGFNPERVKANIEKLQAAYKKNQKPQMRMDNFFQVKPSAPKQKPNSASKRK-AEPAKGKKKAV 412          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig14450.3054.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FLF9_ECTSI1.920e-22076.11Flap endonuclease 1 n=2 Tax=Ectocarpus TaxID=2879 ... [more]
A0A835Z748_9STRA1.040e-14564.24Flap endonuclease 1 n=1 Tax=Tribonema minus TaxID=... [more]
A0A7S2SD31_9STRA5.920e-13554.27Flap endonuclease 1 n=1 Tax=Rhizochromulina marina... [more]
A0A1V9YW30_9STRA6.240e-12549.44Flap endonuclease 1 n=4 Tax=Saprolegniaceae TaxID=... [more]
A0A6G0WCI0_9STRA4.870e-12449.19Flap endonuclease 1 n=1 Tax=Aphanomyces euteiches ... [more]
A0A0P4W461_SCYOL7.930e-12446.10Flap endonuclease 1 n=2 Tax=Portunidae TaxID=6757 ... [more]
W4FTR5_9STRA8.440e-12446.97Flap endonuclease 1 n=2 Tax=Aphanomyces TaxID=1008... [more]
A0A6T7HKT1_9STRA1.420e-12356.85Flap endonuclease 1 n=1 Tax=Attheya septentrionali... [more]
FEN1_PHYIT1.510e-12347.53Flap endonuclease 1 n=24 Tax=Peronosporaceae TaxID... [more]
A0A7S3KWM7_9STRA2.810e-12252.41Flap endonuclease 1 n=1 Tax=Amphora coffeiformis T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig14450contigH-elongata_contig14450:2698..7903 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score644.8
Seed ortholog evalue3e-182
Seed eggNOG ortholog2880.D7FLF9
Preferred nameFEN1
KEGG koko:K04799
KEGG Pathwayko03030,ko03410,ko03450,map03030,map03410,map03450
GOsGO:0000003,GO:0000228,GO:0000278,GO:0000287,GO:0000723,GO:0000724,GO:0000725,GO:0000726,GO:0000731,GO:0000734,GO:0000737,GO:0001302,GO:0001654,GO:0003006,GO:0003008,GO:0003674,GO:0003676,GO:0003677,GO:0003684,GO:0003690,GO:0003824,GO:0004518,GO:0004519,GO:0004520,GO:0004521,GO:0004523,GO:0004527,GO:0004529,GO:0004536,GO:0004540,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005657,GO:0005694,GO:0005730,GO:0005737,GO:0005739,GO:0005829,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006271,GO:0006273,GO:0006281,GO:0006284,GO:0006286,GO:0006302,GO:0006303,GO:0006308,GO:0006309,GO:0006310,GO:0006312,GO:0006401,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0006915,GO:0006921,GO:0006950,GO:0006974,GO:0006996,GO:0007049,GO:0007063,GO:0007275,GO:0007423,GO:0007530,GO:0007531,GO:0007533,GO:0007534,GO:0007568,GO:0007569,GO:0007610,GO:0007611,GO:0007613,GO:0008150,GO:0008152,GO:0008219,GO:0008297,GO:0008309,GO:0008409,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009314,GO:0009411,GO:0009416,GO:0009628,GO:0009650,GO:0009987,GO:0010564,GO:0010638,GO:0012501,GO:0016043,GO:0016070,GO:0016311,GO:0016787,GO:0016788,GO:0016796,GO:0016888,GO:0016891,GO:0016893,GO:0016895,GO:0017108,GO:0018130,GO:0019438,GO:0019439,GO:0019725,GO:0022402,GO:0022411,GO:0022413,GO:0022414,GO:0022616,GO:0030145,GO:0030154,GO:0030262,GO:0031974,GO:0031981,GO:0032200,GO:0032201,GO:0032501,GO:0032502,GO:0032505,GO:0032991,GO:0033043,GO:0033044,GO:0033045,GO:0033260,GO:0033554,GO:0033567,GO:0034641,GO:0034644,GO:0034645,GO:0034654,GO:0034655,GO:0035312,GO:0035753,GO:0035822,GO:0035861,GO:0042592,GO:0043010,GO:0043137,GO:0043167,GO:0043169,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043570,GO:0043596,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044270,GO:0044271,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044444,GO:0044446,GO:0044454,GO:0044464,GO:0044786,GO:0045145,GO:0045165,GO:0045787,GO:0045876,GO:0046483,GO:0046700,GO:0046872,GO:0046914,GO:0048256,GO:0048513,GO:0048518,GO:0048522,GO:0048731,GO:0048856,GO:0048869,GO:0050789,GO:0050794,GO:0050877,GO:0050890,GO:0050896,GO:0051128,GO:0051130,GO:0051276,GO:0051716,GO:0051726,GO:0051908,GO:0051983,GO:0051984,GO:0060041,GO:0060249,GO:0065007,GO:0065008,GO:0070013,GO:0070914,GO:0071214,GO:0071478,GO:0071482,GO:0071704,GO:0071840,GO:0071897,GO:0090068,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0090734,GO:0097159,GO:0097194,GO:0098501,GO:0098502,GO:0104004,GO:0140097,GO:0140098,GO:1901360,GO:1901361,GO:1901362,GO:1901363,GO:1901575,GO:1901576,GO:1902969,GO:1903047,GO:1903469,GO:1904162,GO:2001252
EggNOG free text desc.endonuclease activity
EggNOG OGsCOG0258@1,KOG2519@2759
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko03032,ko03400,ko04147
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionXPG-I domain
Ec32 orthologEc-12_008010.1
Exons11
Model size2560
Cds size1383
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig14450.3054.1prot_H-elongata_contig14450.3054.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig14450 3890..7903 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929857.0903852-UTR-H-elongata_contig14450:2697..31601622929857.0903852-UTR-H-elongata_contig14450:2697..3160Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig14450 2698..3160 -
1691679185.2681258-UTR-H-elongata_contig14450:2697..31601691679185.2681258-UTR-H-elongata_contig14450:2697..3160Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig14450 2698..3160 -
1622929857.102794-UTR-H-elongata_contig14450:3175..38891622929857.102794-UTR-H-elongata_contig14450:3175..3889Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig14450 3176..3889 -
1691679185.2794971-UTR-H-elongata_contig14450:3175..38891691679185.2794971-UTR-H-elongata_contig14450:3175..3889Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig14450 3176..3889 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929857.1147828-CDS-H-elongata_contig14450:3889..40161622929857.1147828-CDS-H-elongata_contig14450:3889..4016Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig14450 3890..4016 -
1691679185.2868035-CDS-H-elongata_contig14450:3889..40161691679185.2868035-CDS-H-elongata_contig14450:3889..4016Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig14450 3890..4016 -
1622929857.125616-CDS-H-elongata_contig14450:4299..43801622929857.125616-CDS-H-elongata_contig14450:4299..4380Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig14450 4300..4380 -
1691679185.2954211-CDS-H-elongata_contig14450:4299..43801691679185.2954211-CDS-H-elongata_contig14450:4299..4380Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig14450 4300..4380 -
1622929857.1392896-CDS-H-elongata_contig14450:4776..48591622929857.1392896-CDS-H-elongata_contig14450:4776..4859Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig14450 4777..4859 -
1691679185.3092177-CDS-H-elongata_contig14450:4776..48591691679185.3092177-CDS-H-elongata_contig14450:4776..4859Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig14450 4777..4859 -
1622929857.1571898-CDS-H-elongata_contig14450:4971..52981622929857.1571898-CDS-H-elongata_contig14450:4971..5298Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig14450 4972..5298 -
1691679185.318857-CDS-H-elongata_contig14450:4971..52981691679185.318857-CDS-H-elongata_contig14450:4971..5298Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig14450 4972..5298 -
1622929857.175285-CDS-H-elongata_contig14450:5549..56631622929857.175285-CDS-H-elongata_contig14450:5549..5663Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig14450 5550..5663 -
1691679185.328453-CDS-H-elongata_contig14450:5549..56631691679185.328453-CDS-H-elongata_contig14450:5549..5663Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig14450 5550..5663 -
1622929857.1966076-CDS-H-elongata_contig14450:5765..59421622929857.1966076-CDS-H-elongata_contig14450:5765..5942Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig14450 5766..5942 -
1691679185.3386352-CDS-H-elongata_contig14450:5765..59421691679185.3386352-CDS-H-elongata_contig14450:5765..5942Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig14450 5766..5942 -
1622929857.2153406-CDS-H-elongata_contig14450:6219..63931622929857.2153406-CDS-H-elongata_contig14450:6219..6393Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig14450 6220..6393 -
1691679185.347162-CDS-H-elongata_contig14450:6219..63931691679185.347162-CDS-H-elongata_contig14450:6219..6393Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig14450 6220..6393 -
1622929857.2317374-CDS-H-elongata_contig14450:7224..73351622929857.2317374-CDS-H-elongata_contig14450:7224..7335Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig14450 7225..7335 -
1691679185.3598583-CDS-H-elongata_contig14450:7224..73351691679185.3598583-CDS-H-elongata_contig14450:7224..7335Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig14450 7225..7335 -
1622929857.249266-CDS-H-elongata_contig14450:7463..75231622929857.249266-CDS-H-elongata_contig14450:7463..7523Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig14450 7464..7523 -
1691679185.3767035-CDS-H-elongata_contig14450:7463..75231691679185.3767035-CDS-H-elongata_contig14450:7463..7523Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig14450 7464..7523 -
1622929857.2629273-CDS-H-elongata_contig14450:7774..79031622929857.2629273-CDS-H-elongata_contig14450:7774..7903Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig14450 7775..7903 -
1691679185.3898857-CDS-H-elongata_contig14450:7774..79031691679185.3898857-CDS-H-elongata_contig14450:7774..7903Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig14450 7775..7903 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig14450.3054.1

>prot_H-elongata_contig14450.3054.1 ID=prot_H-elongata_contig14450.3054.1|Name=mRNA_H-elongata_contig14450.3054.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=461bp
MGITGLTKLLSDEAPNCMKEIDLDSLTGRKVAIDASMAMYQFLIAVRSGG
EGQAHMLTNEAGEVTSHIQGMFNRTIRMLSKGVKPCYIFDGKPPDLKGGE
LAKRKEKRTKAEADLKNATEADEKSEIDKFSRRLVRVTSEHNEDCKTLLR
LMGVPVFTAPSEAEAQCAALAREGVVYGAATEDMDSLTFKTPKLLRRMTF
SGAQQPILEVDYTKLLQGLDLSHEKFVDLCILCGCDYTGSIKGIGPKKAL
AFVRQHGTIEEIIKHLDPTKYPLPDDWLEPSERAKKRKKEKQEAKARKEA
RANEQIEEKQKSEHDQEADDDVKENSASSTKRERDEDRNEDCEDELDDTP
PMYRQARKLFLKPEVKSAGEIKLKWTDPDETRLVKFLVEEKGFNAERVAS
GITKLKAARKNVSQKRMDSFFSVVPHQNGRAKKLASKEKDATRAKGKGSA
VTGKSKGKRR*
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mRNA from alignment at H-elongata_contig14450:2698..7903-

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig14450.3054.1 ID=mRNA_H-elongata_contig14450.3054.1|Name=mRNA_H-elongata_contig14450.3054.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=5206bp|location=Sequence derived from alignment at H-elongata_contig14450:2698..7903- (Himanthalia elongata Himel1 dioecious)
ATGGGTATTACTGGGCTGACGAAACTCCTTTCTGATGAGGCGCCGAACTG CATGAAGGAAATCGATCTCGATTCTTTAACTGGACGTAAAGTAGCCATCG ATGCATCCATGGCAATGTACCAATTTCTCGTGAGTCGACGCCTTAGAATC TACGCTCAACGGCTGTTCTGGGACACTCGCCAAATAGGAACGTTGACCGA ACTGACGCTTTCTGAACGTTCTTTCTGAACGTTCTCTCTGAGCGTCCTTG CTGGCCATGTATATTACTGCTGTTATCACCATAATCCCACCGTAGTCGCA ATGCCTCGAGTTCCTCGTTTACCGCGCCAGTTACATGTTTACAAAGAGTT TCAAATTTGAAATGCAAATTCGTCCCTCAGATCGCTGTACGCTCAGGAGG GGAAGGCCAGGCCCACATGCTTACCAACGAGGCTGGAGAGGTAAGCAATC GATCGGTGAATCGAACATGTGGTGTAGGAAGTTGATGAGTGTAACCCCCT AGTCCTATAAGAACCAAATCACGGCTCCAGTATCTAACTTGATCATGTAC CTTTGGTGCTTTGTTCAGGTGACTAGTCATATTCAGGGCATGTTCAACCG AACGATCCGAATGCTGTCCAAGGGAGTGAAGCCATGCTACATTTTCGACG GGAAGCCTCCTGATCTCAAGGGGGGAGAAGTAAGTGGTTTCACTTGTGTA GCGCGTAGTTTACTTAGAACATTGTCTGTCTATCGATAGGAAATTATCAT AGCTGTGAATATATTTAAAAGAAAATCGGTGTAACCTACTTTCTCAAATT CCGCTTTATCTGCTGCATCTTAACAGTAGTCGAAATTCCCACTTCACGGC GCCCATAGTCAAACAATTTGATCGACCGACGCAATATAGTCTAGTAGCTC TCCCCACAAAAATGGACGAGGATCTACCCTGCTGTAACTTTTTTCCAATG TGGCAACTCGTGAAAAAATGTGCGGCCTATCCTCTGCCGTTTCTCGGCAT CCCACCGAGCAACGTATATAGCATTACCCTAAAAAACAAAACAGTTATTT CCACACTCATCGATGACAAGCACGAGCTCCTTCCTGGATTCAATGTGGAA ATTAGATGGAATTCATTTTTCTATGCGCTGAATGTTGTTCAGTGCTATAC TAGAAAAATGTCGCGAATAAGACAAACTTTGCCGCGAGCAAAAATATATC GTCTAGCTAGACCAACGCGGGTGTATTGCTTATGGGGAAAAGTACGCACG ATAGAGGGCACCCTCGCGTTAATTTCGCCGGTACCCGGAAATGTATTTGA CATTTTGTTCCTTGGTCTTTCTTGAAAACTTTCATAGCTCCGTTTCGATA GCCCTTCAACACGCCCCCTCGCGAGCTTACTCATTCAGTGTGATACGCTC TTGTCGCAGAGAGCTCCTATACCCTCCGGGATATCTCTGCTAGTGGAGTC GATCCATTTTAACAGCGCCACTTCTCGGTCCTCTTTGCTGTCCCTAATAC CACGGTACAGCTCGCGAAACGAAAGGAAAAACGCACAAAGGCCGAAGCAG ATCTGAAGAATGCCACTGAGGCGGATGAGAAAAGTGAAATAGACAAGTTC TCGAGGCGCTTGGTCAGGGTCACAAGTGAACACAACGAAGATTGCAAGAC ACTTTTGCGTCTTATGGGAGTACCAGTTTTTACTGTGAGTTAACTCCCAT TTCATCCCTTTGCGAAGCTTTTGACGTATTTGGGGAAATGCTATTTTTAA ATTGAGGTCCATACATCGGTCCTCCGACCATTTGACGCACTCTTGGTCAT AAGGACATCGATTGCAAAAGCACGTGCAAATGCGGATCTTCTTGCTGGAA AAGCTATATTTCAAACATCCGTCTCATGCACCCGCATCAGTTATATATGT TTCGATGGCAAGATGAAAATCAACAAATGACTTCGTCGTGGCCTACCTTG TTTTTGGACAGGCTCCGTCTGAAGCTGAGGCTCAGTGTGCTGCTTTGGCG CGCGAAGGAGTGGTATACGGAGCGGCTACAGAGGACATGGACTCCCTCAC CTTTAAGACCCCCAAATTATTGCGGCGTATGACGTTCTCTGGTGCCCAAC AACCCATCCTGGAAGTGGACTACACAAAGCTGCTCCAGGTACCGTCCCGT AAGGATAAAGCTGTAAATCAGGGAAGTATTTGTTCCTGAAAATACAATTT TGGCTCTGTTCATCCTTGATGTGTCGTGTACTATGCGCAGGGTCTGGATC TCTCCCACGAAAAATTTGTCGATCTATGCATCCTCTGCGGATGTGACTAC ACGGGATCCATCAAGGGAATTGGTCCAAAAAAAGCGTTAGCTTTTGTACG GCAGGTAAGAAGTTCAATTGGTGAGTGTCTCGGCCGTTCCTAAAAAAATT AGTTAAAATATATAAAGTGCCCGATTTCGAATATGGCAAAGGAAGGACGA TCAGGTCGGAAAAACTTTGTAATTACTTAATACCGGACTCGAAATAACGT TTCGGCATATCTTTATCCAAGTAAAGGCAAGATACCTATTTTACTATTGT GAATAACACATTGATCTTCGTGCTTTCGGCCCCTTCCATAAAATCCTAAT CGAAGCACGGCACAATTGAGGAGATAATCAAGCACCTGGATCCTACCAAG TACCCCCTCCCAGACGACTGGCTCGAACCTTCGGAGAGAGCCAAAAAACG CAAAAAGGAAAAGCAGGAGGCGAAGGCTAGAAAGGAGGCTAGGGCGAACG AGCAGATTGAAGAGAAGCAAAAAAGCGAACATGATCAAGAAGCAGACGAC GATGTCAAAGAAAACAGCGCCTCCTCGACAAAACGTGAACGAGACGAAGA TAGGAACGAGGACTGCGAGGACGAGCTAGATGACACGCCTCCTATGTACC GTCAAGCAAGAAAACTCTTTCTCAAACCCGAGGTAAGGGGTGATCGTGCG CTGATAATCTGATTTTTTTTTTAGCAATCTTGCGCTTCTTTTCAAATTTG GCTAGTGATTTTTTCATTTCTTATTCTTTCCAATACCTTGTCAGGTGAAA TCTGCGGGCGAGATTAAGCTTAAATGGACCGATCCTGACGAAACTCGGCT CGTCAAATTTCTCGTCGAGGAAAAGGGGTACGTGATTCGATCTAAATGCT TTTTGAACTAGTGTAATGAGGTCATTATCTTGCAAATGTGACCAGGTAAA ATCGGGATTGGCCCAATGGCGGGTGACGTAGAGATGGATGCCTTAGCGTG AAACGAGAGGATTCCGGGAGTACGCATCAGATTCGGCCTAGGTTTAAAGA ATGGGTAGGCTAAAGCGGGACGAGACCGATGAACCCATCTCATGAGACCA CAAATTCTCAAGCGCTAACATTTTCCTGTTCAGACCACCACAAGCAAGAG GCAACCAAATTGCTACATGTTATGATTACATTATAAGTGCGATATCTGGC ACGTTTTTTTCTTGATTTGACAAGTGTCATTTTGAGCTGCCTACTTATAC GCGCTTATCTTTCTGATATGCAGGTTTAACGCCGAGCGTGTAGCATCGGG TATCACCAAGTTAAAGGCCGCACGGAAGAACGTGTCGCAAAAGCGTATGG ACAGGTATTATTAAACTTCGTCGTAAAGTCGATTTAGGTGGTTTGGATTA AAGCAAGGGTTGAGGATACAGCCGAAACCACTCTCGACCGACTTGAACAC GTCTACTTATTAATCTGACCTACGCCGCGTGTTCCTTAATGATAATCACA TTATGTCCCTCTCCTGTTTTTTTTCAGTACAGCCAAAACCGCTCTCGACC GACTTAAACACGTCTACTTATTAATCTGACCTACGTCGCGTGTTCCTTTA TGATAATCACATTATGTCCCCTCTTGTTTTTATGCAGTTTCTTCAGCGTA GTACCTCACCAAAACGGTCGAGCAAAGAAGCTCGCATCTAAGGAGAAAGA TGCCACCAGGGCGAAAGGAAAGGGCTCAGCAGTAACAGGAAAAAGCAAAG GCAAAAGACGATAAAAATAGACAAGCAGCCCCTCTTCTGATCGGCTTTTA ATGCTGTAGAGTTGTCCGCATGCCCCGAGTGCGCTAACCAATACATTAAA GCGTTTTTTGAATGAAAACACTTGTGCGGGGCGGTTTATAAATCGGGGGT TTTCTTGTCATTTTTTGTTTTGGTGCTCGTGCACTTTCGATGGCGAGGTA GCTCTTGTATTTTAATTTTCGTGAGATACGTTCACAAAATACGGGATGTA TTTTACCTGGCTATTAAATTGCTGCATAACCCAGCGGCGTCGGTCGATGC CTTCATTGTTGTACCTGCAATTTTTTCATTAGCGAGAATTCGTGATGTGT AGACTTCTTTCAAAGGGCCTACAAAGCTGCAACTCTTGCCATCTTCAGAC GTTCGCTATTCACTTACTTTATCGTTAAGAGTCGGACACTAAATTAGGGT GTATCACGAGCGAGTCAAGTCAATCCTGAACCTCCGTTGCTGCACAGAAA GCAGCTACAGACTGTGCATTCACCGCATTTCGCAGACCCTACTTGCCCAT TCAAACCAAACTGGCAAATGAAGACTACATCAGTACTTGGTGGAACACTG TTCAAAGTGATCATATTGCCAAGTGCACCGTCCGTTAGGCCCTGTAGGGG TGTCGCCCATATCTGTACAGGTATTAAAACGTGGAAAAAAGTTATCACAA GTCGACTCAATGGCTGATGAATCTTTGAGTCTGCACGTACGAGTAGTTCA GTTGTCCTCTACTGTAGAGTATGTTCAATGTCATCTTTACGTCTGCACGT ACTACCAGTATAGTTGTCATCGTTGAGTGTTCAATGTACACCTTCACTAA GTACGTAGTGATAACTTTGTTGCCAACAACACACCGCCAAGTACTGCTAC AGGAAGCTTATAACATTAGATTGGTTGTACATGTACTAATGTGGCATGGT ACAACAGACGGTCTTCGAGTGAGATTTGTGCCCACAATGCAGCTGGCAGA GTACTTCGTGCCATGTAAACAGCGCTGCTCAAGCGGCCTAACATGTACTT GCAAAAAAAGCATCGTACTCTCTCGAGGTACTGTCCTGCAGGCGTTCGTG CCGAAGTATCACCGCCCAGGGAGAATGCGCGTAGTTAACCTACACGATGT TATGCCTCAATCTACACGGGGTCTGTGCTTGAAGGCAAATTACAACTTTT GCGTAG
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Coding sequence (CDS) from alignment at H-elongata_contig14450:2698..7903-

>mRNA_H-elongata_contig14450.3054.1 ID=mRNA_H-elongata_contig14450.3054.1|Name=mRNA_H-elongata_contig14450.3054.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2766bp|location=Sequence derived from alignment at H-elongata_contig14450:2698..7903- (Himanthalia elongata Himel1 dioecious)
ATGGGTATTACTGGGCTGACGAAACTCCTTTCTGATGAGGCGCCGAACTG
CATGAAGGAAATCGATCTCGATTCTTTAACTGGACGTAAAGTAGCCATCG
ATGCATCCATGGCAATGTACCAATTTCTCATGGGTATTACTGGGCTGACG
AAACTCCTTTCTGATGAGGCGCCGAACTGCATGAAGGAAATCGATCTCGA
TTCTTTAACTGGACGTAAAGTAGCCATCGATGCATCCATGGCAATGTACC
AATTTCTCATCGCTGTACGCTCAGGAGGGGAAGGCCAGGCCCACATGCTT
ACCAACGAGGCTGGAGAGATCGCTGTACGCTCAGGAGGGGAAGGCCAGGC
CCACATGCTTACCAACGAGGCTGGAGAGGTGACTAGTCATATTCAGGGCA
TGTTCAACCGAACGATCCGAATGCTGTCCAAGGGAGTGAAGCCATGCTAC
ATTTTCGACGGGAAGCCTCCTGATCTCAAGGGGGGAGAAGTGACTAGTCA
TATTCAGGGCATGTTCAACCGAACGATCCGAATGCTGTCCAAGGGAGTGA
AGCCATGCTACATTTTCGACGGGAAGCCTCCTGATCTCAAGGGGGGAGAA
CTCGCGAAACGAAAGGAAAAACGCACAAAGGCCGAAGCAGATCTGAAGAA
TGCCACTGAGGCGGATGAGAAAAGTGAAATAGACAAGTTCTCGAGGCGCT
TGGTCAGGGTCACAAGTGAACACAACGAAGATTGCAAGACACTTTTGCGT
CTTATGGGAGTACCAGTTTTTACTCTCGCGAAACGAAAGGAAAAACGCAC
AAAGGCCGAAGCAGATCTGAAGAATGCCACTGAGGCGGATGAGAAAAGTG
AAATAGACAAGTTCTCGAGGCGCTTGGTCAGGGTCACAAGTGAACACAAC
GAAGATTGCAAGACACTTTTGCGTCTTATGGGAGTACCAGTTTTTACTGC
TCCGTCTGAAGCTGAGGCTCAGTGTGCTGCTTTGGCGCGCGAAGGAGTGG
TATACGGAGCGGCTACAGAGGACATGGACTCCCTCACCTTTAAGACCCCC
AAATTATTGCGGCGTATGACGTTCTCTGGTGCCCAACAACCCATCCTGGA
AGTGGACTACACAAAGCTGCTCCAGGCTCCGTCTGAAGCTGAGGCTCAGT
GTGCTGCTTTGGCGCGCGAAGGAGTGGTATACGGAGCGGCTACAGAGGAC
ATGGACTCCCTCACCTTTAAGACCCCCAAATTATTGCGGCGTATGACGTT
CTCTGGTGCCCAACAACCCATCCTGGAAGTGGACTACACAAAGCTGCTCC
AGGGTCTGGATCTCTCCCACGAAAAATTTGTCGATCTATGCATCCTCTGC
GGATGTGACTACACGGGATCCATCAAGGGAATTGGTCCAAAAAAAGCGTT
AGCTTTTGTACGGCAGGGTCTGGATCTCTCCCACGAAAAATTTGTCGATC
TATGCATCCTCTGCGGATGTGACTACACGGGATCCATCAAGGGAATTGGT
CCAAAAAAAGCGTTAGCTTTTGTACGGCAGCACGGCACAATTGAGGAGAT
AATCAAGCACCTGGATCCTACCAAGTACCCCCTCCCAGACGACTGGCTCG
AACCTTCGGAGAGAGCCAAAAAACGCAAAAAGGAAAAGCAGGAGGCGAAG
GCTAGAAAGGAGGCTAGGGCGAACGAGCAGATTGAAGAGAAGCAAAAAAG
CGAACATGATCAAGAAGCAGACGACGATGTCAAAGAAAACAGCGCCTCCT
CGACAAAACGTGAACGAGACGAAGATAGGAACGAGGACTGCGAGGACGAG
CTAGATGACACGCCTCCTATGTACCGTCAAGCAAGAAAACTCTTTCTCAA
ACCCGAGCACGGCACAATTGAGGAGATAATCAAGCACCTGGATCCTACCA
AGTACCCCCTCCCAGACGACTGGCTCGAACCTTCGGAGAGAGCCAAAAAA
CGCAAAAAGGAAAAGCAGGAGGCGAAGGCTAGAAAGGAGGCTAGGGCGAA
CGAGCAGATTGAAGAGAAGCAAAAAAGCGAACATGATCAAGAAGCAGACG
ACGATGTCAAAGAAAACAGCGCCTCCTCGACAAAACGTGAACGAGACGAA
GATAGGAACGAGGACTGCGAGGACGAGCTAGATGACACGCCTCCTATGTA
CCGTCAAGCAAGAAAACTCTTTCTCAAACCCGAGGTGAAATCTGCGGGCG
AGATTAAGCTTAAATGGACCGATCCTGACGAAACTCGGCTCGTCAAATTT
CTCGTCGAGGAAAAGGGGTGAAATCTGCGGGCGAGATTAAGCTTAAATGG
ACCGATCCTGACGAAACTCGGCTCGTCAAATTTCTCGTCGAGGAAAAGGG
GTTTAACGCCGAGCGTGTAGCATCGGGTATCACCAAGTTAAAGGCCGCAC
GGAAGAACGTGTCGCAAAAGCGTATGGACAGGTTTAACGCCGAGCGTGTA
GCATCGGGTATCACCAAGTTAAAGGCCGCACGGAAGAACGTGTCGCAAAA
GCGTATGGACAGTTTCTTCAGCGTAGTACCTCACCAAAACGGTCGAGCAA
AGAAGCTCGCATCTAAGGAGAAAGATGCCACCAGGGCGAAAGGAAAGGGC
TCAGCAGTAACAGGAAAAAGCAAAGGCAAAAGACGATAATTTCTTCAGCG
TAGTACCTCACCAAAACGGTCGAGCAAAGAAGCTCGCATCTAAGGAGAAA
GATGCCACCAGGGCGAAAGGAAAGGGCTCAGCAGTAACAGGAAAAAGCAA
AGGCAAAAGACGATAA
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