prot_H-elongata_contig14423.3036.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig14423.3036.1
Unique Nameprot_H-elongata_contig14423.3036.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length229
Homology
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BLAST of mRNA_H-elongata_contig14423.3036.1 vs. uniprot
Match: A0A6H5KN26_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KN26_9PHAE)

HSP 1 Score: 115 bits (287), Expect = 1.010e-25
Identity = 73/173 (42.20%), Postives = 96/173 (55.49%), Query Frame = 0 
Query:    2 AKFIFLNPGTEKTLFPNNSSVNNRIRDYFCAMVNSGSLRAAGTVVCAISPTIYNRGHRWVG--ERSGTALDIEDHPMFLEFMSLEGWAAWTKIRSLSSYGRV-----SHVPRCTPQLPRQRSSLLPPHKRDKPNVNGVESFPGLCINLMKNVPYEMLYHCSPHASCRFPSRGL 167
            AK +FLNPG +KTL P+N++   RIRD   A+V SGSL A+GTVVCA+   +Y   HRW G  +++GTAL++EDHPM +EF S  G     K       GRV     +H       +P  R +       D  +V+G ES  G C+NLMK VP+E       +A   FP R L
Sbjct:  740 AKLLFLNPGADKTLLPDNATTLARIRDLTRALVASGSLHASGTVVCALPTPVYEHAHRWAGAFKQAGTALEVEDHPMLVEFESRGGGRPGHKSDRRHLTGRVHQFLVAHQATTGDSIPSVRFTCNQTVTAD--DVHGAESSSGPCLNLMKAVPFE-------NALSPFPPRLL 903
[Close]
BLAST of mRNA_H-elongata_contig14423.3036.1 vs. uniprot
Match: D8LJG8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJG8_ECTSI)

HSP 1 Score: 112 bits (281), Expect = 5.960e-25
Identity = 72/173 (41.62%), Postives = 95/173 (54.91%), Query Frame = 0 
Query:    2 AKFIFLNPGTEKTLFPNNSSVNNRIRDYFCAMVNSGSLRAAGTVVCAISPTIYNRGHRWVG--ERSGTALDIEDHPMFLEFMSLEGWAAWTKIRSLSSYGRV-----SHVPRCTPQLPRQRSSLLPPHKRDKPNVNGVESFPGLCINLMKNVPYEMLYHCSPHASCRFPSRGL 167
            AK +FLNPG +KTL P+N++   RIRD   A+V SGSL A+GTVVC +   +Y   HRW G  +++GTAL++EDHPM +EF S  G     K       GRV     +H       +P  R +       D  +V+G ES  G C+NLMK VP+E       +A   FP R L
Sbjct:  356 AKLLFLNPGADKTLLPDNATTLARIRDLTRALVASGSLHASGTVVCDLPTPVYEHAHRWAGAFKQAGTALEVEDHPMLVEFESRGGGRPGHKSDRRHLTGRVHQFLVAHQATTGDSIPSVRFTCNQTVTAD--DVHGAESSSGPCLNLMKAVPFE-------NALSPFPPRLL 519
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig14423.3036.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KN26_9PHAE1.010e-2542.20Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LJG8_ECTSI5.960e-2541.62Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig14423contigH-elongata_contig14423:1203..2803 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig14423.3036.1mRNA_H-elongata_contig14423.3036.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig14423 660..3637 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig14423.3036.1 ID=prot_H-elongata_contig14423.3036.1|Name=mRNA_H-elongata_contig14423.3036.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=229bp
MAKFIFLNPGTEKTLFPNNSSVNNRIRDYFCAMVNSGSLRAAGTVVCAIS
PTIYNRGHRWVGERSGTALDIEDHPMFLEFMSLEGWAAWTKIRSLSSYGR
VSHVPRCTPQLPRQRSSLLPPHKRDKPNVNGVESFPGLCINLMKNVPYEM
LYHCSPHASCRFPSRGLHIQEKQSCLPAEIETRSSRPPYHLEDGWKYYCG
RKTHCIRQILSAVSVRHSVERWFVQAHA*
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