prot_H-elongata_contig14417.3035.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig14417.3035.1
Unique Nameprot_H-elongata_contig14417.3035.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length971
Homology
[Close]
BLAST of mRNA_H-elongata_contig14417.3035.1 vs. uniprot
Match: D8LK98_ECTSI (Similar to ankyrin 2,3/unc44 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LK98_ECTSI)

HSP 1 Score: 438 bits (1127), Expect = 8.090e-133
Identity = 324/509 (63.65%), Postives = 377/509 (74.07%), Query Frame = 0 
Query:  463 RYMAIVESAIVTSALDLSSTSEH-DTSPSEDDGGMM-EILTDRLMEACNKIEQVTATPTDELSDGAPSIRRRGAGAP----PSAMRRRQASNMSSRALASSMLPTEVEEKFPDSDEEGIARDEGAAARKLRRERVKKRARAHSRRKLAGALTVPTDNKGDPIDVHSAAYSGEVDLVKSYVSQGGDLEVRDAFRATPLMLASERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLASDPIIWRKLKREGFLRDSGENFDLLAAVEGNDTHALGSFIAMGQDVCGFPGNSAAVALAARRLRLDRQGRGGMTAVHLAAFHGYADALRMLLMSGADPNAVCDDGETPLHTACTGGSTLCATLLLDPGGFANPLATDAKGFVPCEKQIAEGRQDMKHLLETKAFQATPATLLGLRADLTDVALQIDAEEELFVRKGVAIKYIRKALKKREADVARLRNTVDARDADLRNLAARMDSIHRILSG 965
            RYMAIVE+A V SALD SSTSEH DTSPSEDDGGMM EILTDRLME C+K+EQ  A+P  +LSDGA      G G      PS  RRRQ SNMS+R L S +   E EE+  DSDE G   D GAAARKLRRER++KRA+    RK++  L VP D++G+ I VH+AAY+G+ D++K+Y+SQGGDLE+RD F+AT LML +ER         XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLA+DP I R L+ E  +R SGENFDLL AVE NDT A+ +FIAMGQ+ CG+P N  AVA+A++RLRL+R GRGGM+AVHLAAFHGYAD+LR+LL +G+DPNAV DDGETPLHTAC GGS L                        CEK IA GRQ+MKHLLE KAFQATPA LL LRADL +VALQIDAEE+LFVRKGVAIKY+RKALKK++ D+                LA RM+S+H++L G
Sbjct:  662 RYMAIVEAANVKSALDNSSTSEHTDTSPSEDDGGMMAEILTDRLMEVCSKMEQSAASPEADLSDGAAEAMALGGGGVHKRRPS--RRRQLSNMSNRTLHS-VAGGEGEEEDADSDE-GSVMDAGAAARKLRRERLRKRAKQS--RKMSSVLAVPKDDRGEVIHVHTAAYNGKQDVLKAYISQGGDLEIRDQFQATALMLCAERGHTQMVDDLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLATDPAIRRILRIEQMVRFSGENFDLLGAVEVNDTMAVANFIAMGQEACGYPHNPNAVAVASKRLRLNRTGRGGMSAVHLAAFHGYADSLRLLLEAGSDPNAVSDDGETPLHTACNGGSILXXXXXXXXXXXXXXXXXXXXXX--CEKHIAGGRQEMKHLLEAKAFQATPANLLALRADLAEVALQIDAEEDLFVRKGVAIKYLRKALKKKDVDLGXXXXXXXXXXXXXXXLADRMESVHKLLKG 1162
[Close]
BLAST of mRNA_H-elongata_contig14417.3035.1 vs. uniprot
Match: D8LK26_ECTSI (Ankyrin n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LK26_ECTSI)

HSP 1 Score: 73.6 bits (179), Expect = 6.910e-10
Identity = 121/366 (33.06%), Postives = 175/366 (47.81%), Query Frame = 0 
Query:  599 SRRKLAGALTVPTDNKGDPIDVHSAAYSGEVDLVKSYVSQGGDLEVRDAFRATPLMLASERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLASDPIIWRKLKREGFLRDSGENFDLLAAVEGNDTHALGSFIAMGQDVCGFPGNSAAVALAARRLRLDRQGRGGMTAVHLAAFHGYADALRMLLMSGADPNAVCDDGETPLHTACTGGSTLCATLLLDPGGFANPLATDAKGFVPCEKQIAEGRQDMKHLLETKAFQATPATLLGLRADLTDVALQIDAEEELFVRKGVAIKYIRKALKKREADVARLRNTVDARDADLRNLAARMDSIHRILS 964
            S RK   + T  +  +   +  H AAY G++  ++ Y   GGDLE RD++RATPL+LA+E+           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX        LAS   I   L  +    +S    D++ AVE ND   L SFI+   D                   L+++G+  MT +H+A+F+G  D +RMLL                                               G  P E+      Q    LLE +++++ P  +  +R     + L++D  E +FV+K +AIK +R A++ +++++  L+               +M +I  I++
Sbjct:   47 SSRKPGSSRTGRSKPRPGGVHAHVAAYEGDLGKLRRYSEAGGDLEKRDSYRATPLLLAAEKGHEACVAYLLDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDRGRIPKRLASRKEISNLLAAKE--TESKLGVDVIEAVERNDVAGLKSFISGKGD-------------------LNQKGKNDMTPLHVASFNGRTDIVRMLL--DXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLGRTPAERSTGTSVQQ---LLEAESYKSIPKNIAQIRKQTEALQLRVDTNESIFVQKAIAIKGLRIAIEDKDSEIRALKRXXXXXXXXXXXXXXKMTAIEEIMN 386
[Close]
BLAST of mRNA_H-elongata_contig14417.3035.1 vs. uniprot
Match: A0A1J3IX16_NOCCA (E3 ubiquitin-protein ligase KEG n=2 Tax=Noccaea caerulescens TaxID=107243 RepID=A0A1J3IX16_NOCCA)

HSP 1 Score: 70.5 bits (171), Expect = 6.260e-9
Identity = 36/83 (43.37%), Postives = 51/83 (61.45%), Query Frame = 0 
Query:  789 RQGRGGMTAVHLAAFHGYADALRMLLMSGADPNAVCDDGETPLHTACTGGSTLCATLLLDPGGFANPLATDAKGFVPCEKQIA 871
            R+G G   A H+ ++HG  D +R LL++GADPNAV D+GET LH A     T CA ++L+ GG  +   ++AKG  P    +A
Sbjct:  170 REGSGPSVA-HICSYHGQPDCMRELLVAGADPNAVDDEGETVLHRAVAKKYTDCAVVILENGGSRSMAISNAKGLTPLHMCVA 251
[Close]
BLAST of mRNA_H-elongata_contig14417.3035.1 vs. uniprot
Match: A0A1J3GB03_NOCCA (E3 ubiquitin-protein ligase KEG n=2 Tax=Noccaea caerulescens TaxID=107243 RepID=A0A1J3GB03_NOCCA)

HSP 1 Score: 70.5 bits (171), Expect = 1.090e-8
Identity = 36/83 (43.37%), Postives = 51/83 (61.45%), Query Frame = 0 
Query:  789 RQGRGGMTAVHLAAFHGYADALRMLLMSGADPNAVCDDGETPLHTACTGGSTLCATLLLDPGGFANPLATDAKGFVPCEKQIA 871
            R+G G   A H+ ++HG  D +R LL++GADPNAV D+GET LH A     T CA ++L+ GG  +   ++AKG  P    +A
Sbjct:  396 REGSGPSVA-HICSYHGQPDCMRELLVAGADPNAVDDEGETVLHRAVAKKYTDCAVVILENGGSRSMAISNAKGLTPLHMCVA 477
[Close]
BLAST of mRNA_H-elongata_contig14417.3035.1 vs. uniprot
Match: A0A7N2KMI5_QUELO (RING-type E3 ubiquitin transferase n=5 Tax=Fagaceae TaxID=3503 RepID=A0A7N2KMI5_QUELO)

HSP 1 Score: 70.1 bits (170), Expect = 2.260e-8
Identity = 35/78 (44.87%), Postives = 49/78 (62.82%), Query Frame = 0 
Query:  794 GMTAVHLAAFHGYADALRMLLMSGADPNAVCDDGETPLHTACTGGSTLCATLLLDPGGFANPLATDAKGFVPCEKQIA 871
            G +  H+ A++G  D +R LL++GADPNAV DDGET LH A +   T CA ++L+ GG  +  A ++KG  P    IA
Sbjct:  567 GRSVAHVCAYYGQPDCMRELLLAGADPNAVDDDGETVLHIAVSKKFTDCAIVILENGGCKSMGALNSKGLTPLHLCIA 644
[Close]
BLAST of mRNA_H-elongata_contig14417.3035.1 vs. uniprot
Match: A0A397ZSD3_BRACM (Uncharacterized protein n=1 Tax=Brassica campestris TaxID=3711 RepID=A0A397ZSD3_BRACM)

HSP 1 Score: 69.3 bits (168), Expect = 2.800e-8
Identity = 35/77 (45.45%), Postives = 49/77 (63.64%), Query Frame = 0 
Query:  789 RQGRGGMTAVHLAAFHGYADALRMLLMSGADPNAVCDDGETPLHTACTGGSTLCATLLLDPGGFANPLATDAKGFVP 865
            R+G G   A H+ ++HG  D +R LL++GADPNAV D+GET LH A T   T CA ++L+ GG  +   ++ KG  P
Sbjct:  566 REGSGPSVA-HVCSYHGQPDCMRELLVAGADPNAVDDEGETVLHRAVTKKYTDCAIVILENGGSRSMAVSNGKGLTP 641
[Close]
BLAST of mRNA_H-elongata_contig14417.3035.1 vs. uniprot
Match: A0A0D3B0Z0_BRAOL (RING-type E3 ubiquitin transferase n=15 Tax=Brassicaceae TaxID=3700 RepID=A0A0D3B0Z0_BRAOL)

HSP 1 Score: 69.3 bits (168), Expect = 3.890e-8
Identity = 35/77 (45.45%), Postives = 49/77 (63.64%), Query Frame = 0 
Query:  789 RQGRGGMTAVHLAAFHGYADALRMLLMSGADPNAVCDDGETPLHTACTGGSTLCATLLLDPGGFANPLATDAKGFVP 865
            R+G G   A H+ ++HG  D +R LL++GADPNAV D+GET LH A T   T CA ++L+ GG  +   ++ KG  P
Sbjct:  563 REGSGPSVA-HVCSYHGQPDCMRELLVAGADPNAVDDEGETVLHRAVTKKYTDCAIVILENGGSRSMAVSNGKGLTP 638
[Close]
BLAST of mRNA_H-elongata_contig14417.3035.1 vs. uniprot
Match: UPI00142E1CCD (E3 ubiquitin-protein ligase KEG isoform X3 n=1 Tax=Brassica campestris TaxID=3711 RepID=UPI00142E1CCD)

HSP 1 Score: 69.3 bits (168), Expect = 3.890e-8
Identity = 35/77 (45.45%), Postives = 49/77 (63.64%), Query Frame = 0 
Query:  789 RQGRGGMTAVHLAAFHGYADALRMLLMSGADPNAVCDDGETPLHTACTGGSTLCATLLLDPGGFANPLATDAKGFVP 865
            R+G G   A H+ ++HG  D +R LL++GADPNAV D+GET LH A T   T CA ++L+ GG  +   ++ KG  P
Sbjct:  566 REGSGPSVA-HVCSYHGQPDCMRELLVAGADPNAVDDEGETVLHRAVTKKYTDCAIVILENGGSRSMAVSNGKGLTP 641
[Close]
BLAST of mRNA_H-elongata_contig14417.3035.1 vs. uniprot
Match: A0A816I147_BRANA (RING-type E3 ubiquitin transferase n=2 Tax=Brassica TaxID=3705 RepID=A0A816I147_BRANA)

HSP 1 Score: 69.3 bits (168), Expect = 3.890e-8
Identity = 35/77 (45.45%), Postives = 49/77 (63.64%), Query Frame = 0 
Query:  789 RQGRGGMTAVHLAAFHGYADALRMLLMSGADPNAVCDDGETPLHTACTGGSTLCATLLLDPGGFANPLATDAKGFVP 865
            R+G G   A H+ ++HG  D +R LL++GADPNAV D+GET LH A T   T CA ++L+ GG  +   ++ KG  P
Sbjct:  564 REGSGPSVA-HVCSYHGQPDCMRELLVAGADPNAVDDEGETVLHRAVTKKYTDCAIVILENGGSRSMAVSNGKGLTP 639
[Close]
BLAST of mRNA_H-elongata_contig14417.3035.1 vs. uniprot
Match: A0A200R767_9MAGN (RING-type E3 ubiquitin transferase n=1 Tax=Macleaya cordata TaxID=56857 RepID=A0A200R767_9MAGN)

HSP 1 Score: 69.3 bits (168), Expect = 3.900e-8
Identity = 35/78 (44.87%), Postives = 44/78 (56.41%), Query Frame = 0 
Query:  794 GMTAVHLAAFHGYADALRMLLMSGADPNAVCDDGETPLHTACTGGSTLCATLLLDPGGFANPLATDAKGFVPCEKQIA 871
            G T  H+ A+HG  D +R LLM+GADPNAV D+GET LH A     T CA  +L+ GG  +    + K   P    IA
Sbjct:  589 GPTVAHVCAYHGQPDCMRELLMAGADPNAVDDEGETVLHRAINKKYTACAVAILENGGCRSMGILNTKNLTPLHMCIA 666
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig14417.3035.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LK98_ECTSI8.090e-13363.65Similar to ankyrin 2,3/unc44 n=2 Tax=Ectocarpus Ta... [more]
D8LK26_ECTSI6.910e-1033.06Ankyrin n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LK26... [more]
A0A1J3IX16_NOCCA6.260e-943.37E3 ubiquitin-protein ligase KEG n=2 Tax=Noccaea ca... [more]
A0A1J3GB03_NOCCA1.090e-843.37E3 ubiquitin-protein ligase KEG n=2 Tax=Noccaea ca... [more]
A0A7N2KMI5_QUELO2.260e-844.87RING-type E3 ubiquitin transferase n=5 Tax=Fagacea... [more]
A0A397ZSD3_BRACM2.800e-845.45Uncharacterized protein n=1 Tax=Brassica campestri... [more]
A0A0D3B0Z0_BRAOL3.890e-845.45RING-type E3 ubiquitin transferase n=15 Tax=Brassi... [more]
UPI00142E1CCD3.890e-845.45E3 ubiquitin-protein ligase KEG isoform X3 n=1 Tax... [more]
A0A816I147_BRANA3.890e-845.45RING-type E3 ubiquitin transferase n=2 Tax=Brassic... [more]
A0A200R767_9MAGN3.900e-844.87RING-type E3 ubiquitin transferase n=1 Tax=Macleay... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 497..517
NoneNo IPR availablePFAMPF13857Ank_5coord: 780..834
e-value: 1.5E-8
score: 34.7
NoneNo IPR availablePANTHERPTHR24134FAMILY NOT NAMEDcoord: 616..723
coord: 779..886
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 826..857
e-value: 4.0
score: 16.4
coord: 615..644
e-value: 4100.0
score: 0.5
coord: 681..710
e-value: 0.023
score: 23.8
coord: 793..822
e-value: 1.4E-4
score: 31.2
coord: 648..677
e-value: 5.0E-4
score: 29.4
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 793..825
score: 11.781
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 648..680
score: 12.129
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 681..713
score: 11.087
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 826..850
score: 8.95
IPR020683Ankyrin repeat-containing domainPFAMPF12796Ank_2coord: 621..711
e-value: 6.5E-14
score: 52.3
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 620..850
score: 43.768
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 737..884
e-value: 3.1E-20
score: 74.5
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 577..734
e-value: 4.0E-31
score: 109.7
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 620..882

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig14417contigH-elongata_contig14417:1078..7888 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig14417.3035.1mRNA_H-elongata_contig14417.3035.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig14417 511..7954 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig14417.3035.1 ID=prot_H-elongata_contig14417.3035.1|Name=mRNA_H-elongata_contig14417.3035.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=971bp
MAPAEQAEVEVHVVFPADLDDSRIGTPESGNRTKAPSGGSLGTKSGSTSL
LSLLSGSPRSLGTVHDTASGPPSPRSPLPELSAEGGEGAETGKGNNAVPS
AHPTPLSMFGGDTELPSDHPTPLSTMGSSQSKCGSRRKSKSKPAAAGSGT
TASKGAAEQPGKTKRGSGSETRGGKVVNPAASSFIQRLKYWSAGATEEKK
TRASSMASKSSTPKTVDAVVVENADTEGVANSPYRVSAHNIRTKQTTRAA
EAGPRGSADASVKRTPLESKHSTASSLAQSSPCCSEIGVKVVPFDTVTSD
AASVFFSGESQREGRAKPLPPPHQPWDQPQVEQLSKTALGAATSRHDVFC
SSRPAELTTLQRLAEDRISSGGGDEIVMEADLANRAAVEKEGKKDEDVES
DMDWDVLSDEEKEVEEKQEIVAPPPPPPLIEKPAEPAPPYSYSRGILPAP
DTVAPQQPPPPPRYMAIVESAIVTSALDLSSTSEHDTSPSEDDGGMMEIL
TDRLMEACNKIEQVTATPTDELSDGAPSIRRRGAGAPPSAMRRRQASNMS
SRALASSMLPTEVEEKFPDSDEEGIARDEGAAARKLRRERVKKRARAHSR
RKLAGALTVPTDNKGDPIDVHSAAYSGEVDLVKSYVSQGGDLEVRDAFRA
TPLMLASERGHTEMVEALLSSGADVCSVDENGNSALHLACFYSNTDVVVL
LLAVDVELTARDSEGRTPLDLASDPIIWRKLKREGFLRDSGENFDLLAAV
EGNDTHALGSFIAMGQDVCGFPGNSAAVALAARRLRLDRQGRGGMTAVHL
AAFHGYADALRMLLMSGADPNAVCDDGETPLHTACTGGSTLCATLLLDPG
GFANPLATDAKGFVPCEKQIAEGRQDMKHLLETKAFQATPATLLGLRADL
TDVALQIDAEEELFVRKGVAIKYIRKALKKREADVARLRNTVDARDADLR
NLAARMDSIHRILSGGRRVE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR020683Ankyrin_rpt-contain_dom
IPR036770Ankyrin_rpt-contain_sf