prot_H-elongata_contig143643.3006.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig143643.3006.1
Unique Nameprot_H-elongata_contig143643.3006.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length202
Homology
BLAST of mRNA_H-elongata_contig143643.3006.1 vs. uniprot
Match: A0A2R4QQ80_9PHAE (NADH dehydrogenase subunit 9 n=3 Tax=Fucus TaxID=3011 RepID=A0A2R4QQ80_9PHAE)

HSP 1 Score: 355 bits (912), Expect = 1.630e-123
Identity = 165/188 (87.77%), Postives = 178/188 (94.68%), Query Frame = 0
Query:   15 MFRYLIIYTVSLTRLLPIQTFKVFGHEIVISVSKKYLLATLMFLHKHSNSSFQLLTSISGVDYPEREERFEIVYELLNVRSNCRIRVKTHTDEINPLPSVVNIYPCANWWEREIWDLFGVFFSGHPDLRRLLTDYGFEGHPLRKDFPLSGYFELRYDEDHRVVVCEPIELTQEFRSFDFHTPWSADIK 202
            MFR LI+Y  SLTRLLP+QTF+VFGHEIVI+VSKKYLLATLMFLH HSNS++QLLTSISGVDYPER+ERFEIVY+LLN+RSN RIR+KT TDEINPLPSVV+IYP ANWWEREIWDLFGVFFSGHPDLRRLLTDYGFEGHPLRKDFPLSGYFELRYDED RVVVCEPIELTQEFR+FDFH PWS D+K
Sbjct:    1 MFRSLIVYATSLTRLLPVQTFQVFGHEIVINVSKKYLLATLMFLHHHSNSNYQLLTSISGVDYPERDERFEIVYDLLNIRSNSRIRIKTQTDEINPLPSVVSIYPSANWWEREIWDLFGVFFSGHPDLRRLLTDYGFEGHPLRKDFPLSGYFELRYDEDQRVVVCEPIELTQEFRTFDFHIPWSQDLK 188          
BLAST of mRNA_H-elongata_contig143643.3006.1 vs. uniprot
Match: A0A0U2KE80_9PHAE (NADH dehydrogenase subunit 9 n=58 Tax=Phaeophyceae TaxID=2870 RepID=A0A0U2KE80_9PHAE)

HSP 1 Score: 342 bits (876), Expect = 4.830e-118
Identity = 156/184 (84.78%), Postives = 173/184 (94.02%), Query Frame = 0
Query:   15 MFRYLIIYTVSLTRLLPIQTFKVFGHEIVISVSKKYLLATLMFLHKHSNSSFQLLTSISGVDYPEREERFEIVYELLNVRSNCRIRVKTHTDEINPLPSVVNIYPCANWWEREIWDLFGVFFSGHPDLRRLLTDYGFEGHPLRKDFPLSGYFELRYDEDHRVVVCEPIELTQEFRSFDFHTPWS 198
            MF  LI+Y +SLTRL+P+QTF+VFGHEIVISVSKKYLLATL FLH HSN +FQ+LTSISGVDYPEREERFEIVY+LLNVRSNCR+R+KTHTDEINPLPSVV+++P ANWWEREIWDLFGVFFS HPDLRR+LTDYGFEGHPLRKDFPLSGYFELRYDED +VVVCE IEL+QEFRSF+FH PWS
Sbjct:    1 MFSSLIVYAISLTRLVPVQTFQVFGHEIVISVSKKYLLATLTFLHHHSNGNFQMLTSISGVDYPEREERFEIVYDLLNVRSNCRLRIKTHTDEINPLPSVVSLFPSANWWEREIWDLFGVFFSNHPDLRRILTDYGFEGHPLRKDFPLSGYFELRYDEDQKVVVCEAIELSQEFRSFNFHVPWS 184          
BLAST of mRNA_H-elongata_contig143643.3006.1 vs. uniprot
Match: A0A8F0FDI1_9PHAE (NADH dehydrogenase subunit 9 n=1 Tax=Chorda asiatica TaxID=1281577 RepID=A0A8F0FDI1_9PHAE)

HSP 1 Score: 340 bits (873), Expect = 1.390e-117
Identity = 158/186 (84.95%), Postives = 174/186 (93.55%), Query Frame = 0
Query:   15 MFRYLIIYTVSLTRLLPIQTFKVFGHEIVISVSKKYLLATLMFLHKHSNSSFQLLTSISGVDYPEREERFEIVYELLNVRSNCRIRVKTHTDEINPLPSVVNIYPCANWWEREIWDLFGVFFSGHPDLRRLLTDYGFEGHPLRKDFPLSGYFELRYDEDHRVVVCEPIELTQEFRSFDFHTPWSAD 200
            MF  LI+Y  SLTRL+P+QTF+VFGHEIVISVSKKYLLATL+FLH HSN ++QLLTSISGVDYPEREERFEIVY+LLN+RSN R+RVKT+TDEINPLPSVV+++P ANWWEREIWDLFGVFFS HPDLRR+LTDYGFEGHPLRKDFPLSGYFELRYDED RVVVCE IELTQEFRSFDFHTPWS +
Sbjct:    1 MFSSLIVYATSLTRLVPVQTFQVFGHEIVISVSKKYLLATLIFLHHHSNGNYQLLTSISGVDYPEREERFEIVYDLLNLRSNSRLRVKTYTDEINPLPSVVSLFPSANWWEREIWDLFGVFFSDHPDLRRILTDYGFEGHPLRKDFPLSGYFELRYDEDQRVVVCEAIELTQEFRSFDFHTPWSQN 186          
BLAST of mRNA_H-elongata_contig143643.3006.1 vs. uniprot
Match: A0A0U1XC91_SCYLO (NADH dehydrogenase subunit 9 n=2 Tax=Scytosiphonaceae TaxID=2891 RepID=A0A0U1XC91_SCYLO)

HSP 1 Score: 337 bits (863), Expect = 4.630e-116
Identity = 157/186 (84.41%), Postives = 170/186 (91.40%), Query Frame = 0
Query:   15 MFRYLIIYTVSLTRLLPIQTFKVFGHEIVISVSKKYLLATLMFLHKHSNSSFQLLTSISGVDYPEREERFEIVYELLNVRSNCRIRVKTHTDEINPLPSVVNIYPCANWWEREIWDLFGVFFSGHPDLRRLLTDYGFEGHPLRKDFPLSGYFELRYDEDHRVVVCEPIELTQEFRSFDFHTPWSAD 200
            MF  LIIY  SLTRLLP+QTF+VFGHEIVISVSK YLL TL FLH HSN ++Q+LTSISGVDYPEREERFEIVY+LLNVRSN RIR+KTHTDEINPLPSVV+++  ANWWEREIWDLFGVFFS HPDLRR+LTDYGFEGHPLRKDFPLSGYFELRYDED RVVVCEPIEL+QEFRSFDFH PWS +
Sbjct:    1 MFHSLIIYAKSLTRLLPVQTFQVFGHEIVISVSKNYLLPTLTFLHHHSNGNYQMLTSISGVDYPEREERFEIVYDLLNVRSNSRIRIKTHTDEINPLPSVVSLFTSANWWEREIWDLFGVFFSNHPDLRRILTDYGFEGHPLRKDFPLSGYFELRYDEDQRVVVCEPIELSQEFRSFDFHIPWSQN 186          
BLAST of mRNA_H-elongata_contig143643.3006.1 vs. uniprot
Match: A0A516ICK1_9PHAE (NADH dehydrogenase subunit 9 n=2 Tax=Lessoniaceae TaxID=35120 RepID=A0A516ICK1_9PHAE)

HSP 1 Score: 336 bits (862), Expect = 6.580e-116
Identity = 152/186 (81.72%), Postives = 172/186 (92.47%), Query Frame = 0
Query:   15 MFRYLIIYTVSLTRLLPIQTFKVFGHEIVISVSKKYLLATLMFLHKHSNSSFQLLTSISGVDYPEREERFEIVYELLNVRSNCRIRVKTHTDEINPLPSVVNIYPCANWWEREIWDLFGVFFSGHPDLRRLLTDYGFEGHPLRKDFPLSGYFELRYDEDHRVVVCEPIELTQEFRSFDFHTPWSAD 200
            MF  LI+Y  SLTRL+P+QTF+VFGHEIVISVSKKYLLATL FL+ HSN +FQ+LTSISGVDYPER+ERFEIVY+LLN+RSNCR+R+KTHTDEINPLPS+V+++P ANWWEREIWDLFGVFF  HPDLRR+LTDYGFEGHPLRKDFPLSGYFELRYDED +VVVCE IEL+QEFRSFDFH PWS +
Sbjct:    1 MFNSLIVYATSLTRLVPVQTFQVFGHEIVISVSKKYLLATLTFLYHHSNGNFQMLTSISGVDYPERKERFEIVYDLLNIRSNCRLRIKTHTDEINPLPSIVSLFPSANWWEREIWDLFGVFFYNHPDLRRILTDYGFEGHPLRKDFPLSGYFELRYDEDQKVVVCEAIELSQEFRSFDFHVPWSQN 186          
BLAST of mRNA_H-elongata_contig143643.3006.1 vs. uniprot
Match: A0A0U1Z5T2_9PHAE (NADH dehydrogenase subunit 9 n=22 Tax=Sargassaceae TaxID=3014 RepID=A0A0U1Z5T2_9PHAE)

HSP 1 Score: 336 bits (861), Expect = 1.110e-115
Identity = 157/184 (85.33%), Postives = 168/184 (91.30%), Query Frame = 0
Query:   15 MFRYLIIYTVSLTRLLPIQTFKVFGHEIVISVSKKYLLATLMFLHKHSNSSFQLLTSISGVDYPEREERFEIVYELLNVRSNCRIRVKTHTDEINPLPSVVNIYPCANWWEREIWDLFGVFFSGHPDLRRLLTDYGFEGHPLRKDFPLSGYFELRYDEDHRVVVCEPIELTQEFRSFDFHTPWS 198
            M   LIIY  SLTRLLP+QTF+VFGHEIVI+VSKKYLLA L FLH HSNS+F LLTSISGVDYP+REERFE+VYELLN+RSN RIR+KT TDEINPLPS+V IYP ANWWERE+WDL GVFFSGHPDLRR+LTDYGFEGHPLRKDFPLSGYFELRYDED RVVVCEPIELTQEFRSFDFH PWS
Sbjct:    1 MLNSLIIYANSLTRLLPVQTFEVFGHEIVINVSKKYLLAALTFLHHHSNSNFHLLTSISGVDYPDREERFEVVYELLNLRSNSRIRIKTCTDEINPLPSIVEIYPSANWWEREVWDLLGVFFSGHPDLRRILTDYGFEGHPLRKDFPLSGYFELRYDEDQRVVVCEPIELTQEFRSFDFHIPWS 184          
BLAST of mRNA_H-elongata_contig143643.3006.1 vs. uniprot
Match: A0A1I9LW92_9PHAE (NADH dehydrogenase subunit 9 n=1 Tax=Pleurocladia lacustris TaxID=246121 RepID=A0A1I9LW92_9PHAE)

HSP 1 Score: 328 bits (841), Expect = 1.040e-112
Identity = 152/183 (83.06%), Postives = 169/183 (92.35%), Query Frame = 0
Query:   15 MFRYLIIYTVSLTRLLPIQTFKVFGHEIVISVSKKYLLATLMFLHKHSNSSFQLLTSISGVDYPEREERFEIVYELLNVRSNCRIRVKTHTDEINPLPSVVNIYPCANWWEREIWDLFGVFFSGHPDLRRLLTDYGFEGHPLRKDFPLSGYFELRYDEDHRVVVCEPIELTQEFRSFDFHTPW 197
            MF  LI+Y  SLTRLLP+QTF+VFGHEIVISVSK+YLLATL FLH HSN +FQ+L+SIS VDYPEREERFEIVY+LL+VRSN R+R+KTHTDEINPLPSVV+++P ANWWEREIWDLFGVFFS HPDLRR+LTDYGFEGHPLRKDFPLSGYFELRYDED RVVVCE IEL+QEFRSF+FH PW
Sbjct:    1 MFPSLIVYAKSLTRLLPVQTFQVFGHEIVISVSKRYLLATLTFLHHHSNGNFQMLSSISAVDYPEREERFEIVYDLLSVRSNSRLRIKTHTDEINPLPSVVSLFPGANWWEREIWDLFGVFFSNHPDLRRILTDYGFEGHPLRKDFPLSGYFELRYDEDQRVVVCESIELSQEFRSFNFHIPW 183          
BLAST of mRNA_H-elongata_contig143643.3006.1 vs. uniprot
Match: Q94YZ7_PYLLI (NADH dehydrogenase subunit 9 n=1 Tax=Pylaiella littoralis TaxID=2885 RepID=Q94YZ7_PYLLI)

HSP 1 Score: 325 bits (832), Expect = 2.450e-111
Identity = 147/184 (79.89%), Postives = 167/184 (90.76%), Query Frame = 0
Query:   15 MFRYLIIYTVSLTRLLPIQTFKVFGHEIVISVSKKYLLATLMFLHKHSNSSFQLLTSISGVDYPEREERFEIVYELLNVRSNCRIRVKTHTDEINPLPSVVNIYPCANWWEREIWDLFGVFFSGHPDLRRLLTDYGFEGHPLRKDFPLSGYFELRYDEDHRVVVCEPIELTQEFRSFDFHTPWS 198
            M   L++Y  SLTRLLP+QTF+VFGHEIVISVSK +LL TL FLH HSN +FQ+LTSISGVD+PEREERFE+VY+LLNVRSN R+RV+THTDEINPLPS+ +++P ANWWEREIWDLFGVFFS HPDLRR+LTDYGFEGHPLRKDFPLSGYFELRYDED +VVVCE IEL+QEFR+FDFH PWS
Sbjct:    1 MLSSLVVYAKSLTRLLPVQTFQVFGHEIVISVSKNHLLGTLTFLHHHSNGNFQMLTSISGVDFPEREERFEVVYDLLNVRSNSRLRVRTHTDEINPLPSITSLFPSANWWEREIWDLFGVFFSNHPDLRRILTDYGFEGHPLRKDFPLSGYFELRYDEDQKVVVCESIELSQEFRTFDFHMPWS 184          
BLAST of mRNA_H-elongata_contig143643.3006.1 vs. uniprot
Match: A0A8F0K105_9PHAE (NADH dehydrogenase subunit 9 n=1 Tax=Analipus japonicus TaxID=31333 RepID=A0A8F0K105_9PHAE)

HSP 1 Score: 323 bits (827), Expect = 1.320e-110
Identity = 151/187 (80.75%), Postives = 164/187 (87.70%), Query Frame = 0
Query:   15 MFRYLIIYTVSLTRLLPIQTFKVFGHEIVISVSKKYLLATLMFLHKHSNSSFQLLTSISGVDYPEREERFEIVYELLNVRSNCRIRVKTHTDEINPLPSVVNIYPCANWWEREIWDLFGVFFSGHPDLRRLLTDYGFEGHPLRKDFPLSGYFELRYDEDHRVVVCEPIELTQEFRSFDFHTPWSADI 201
            MF  LI Y  SLTRLLP+QTF+VF HEIVISVSKKYLL TLMFL  H+N +FQLLT ISGVDYPER ERFEIVY+LL++R N RIRVKTHTDEINPLPS+V ++P ANWWEREIWDLFGVFFS HPDLRR+LTDYGFEGHPLRKDFPLSGYFELRYDED RVVVCE IEL+QEFRSF FHTPW   +
Sbjct:    1 MFHSLIAYATSLTRLLPVQTFEVFEHEIVISVSKKYLLVTLMFLRHHTNGNFQLLTCISGVDYPERVERFEIVYDLLSIRWNSRIRVKTHTDEINPLPSIVGLFPSANWWEREIWDLFGVFFSNHPDLRRILTDYGFEGHPLRKDFPLSGYFELRYDEDQRVVVCEAIELSQEFRSFTFHTPWLQKV 187          
BLAST of mRNA_H-elongata_contig143643.3006.1 vs. uniprot
Match: Q2TUA8_DICDH (NADH dehydrogenase subunit 9 n=1 Tax=Dictyota dichotoma TaxID=2876 RepID=Q2TUA8_DICDH)

HSP 1 Score: 293 bits (750), Expect = 8.140e-99
Identity = 134/180 (74.44%), Postives = 156/180 (86.67%), Query Frame = 0
Query:   19 LIIYTVSLTRLLPIQTFKVFGHEIVISVSKKYLLATLMFLHKHSNSSFQLLTSISGVDYPEREERFEIVYELLNVRSNCRIRVKTHTDEINPLPSVVNIYPCANWWEREIWDLFGVFFSGHPDLRRLLTDYGFEGHPLRKDFPLSGYFELRYDEDHRVVVCEPIELTQEFRSFDFHTPWS 198
            ++ Y   LT+LLPIQT+KV G E+VISVSK++LL  L+FLH H+N  FQLLT +SGVDYPERE RFEIVYELL++  NCRIRVKT+T+E+NP+ S V+++PCANWWEREIWDLFGVFF  HPDLRR+LTDYGFEGHPLRKDFPLSG+ ELRYDED RVVVCEPIEL+QEFR F F TPWS
Sbjct:    9 IVAYANKLTKLLPIQTYKVNGQEMVISVSKEHLLVVLIFLHHHTNGGFQLLTCVSGVDYPERENRFEIVYELLSLGYNCRIRVKTYTNEVNPVFSCVSLFPCANWWEREIWDLFGVFFFTHPDLRRILTDYGFEGHPLRKDFPLSGFVELRYDEDQRVVVCEPIELSQEFRMFSFSTPWS 188          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig143643.3006.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2R4QQ80_9PHAE1.630e-12387.77NADH dehydrogenase subunit 9 n=3 Tax=Fucus TaxID=3... [more]
A0A0U2KE80_9PHAE4.830e-11884.78NADH dehydrogenase subunit 9 n=58 Tax=Phaeophyceae... [more]
A0A8F0FDI1_9PHAE1.390e-11784.95NADH dehydrogenase subunit 9 n=1 Tax=Chorda asiati... [more]
A0A0U1XC91_SCYLO4.630e-11684.41NADH dehydrogenase subunit 9 n=2 Tax=Scytosiphonac... [more]
A0A516ICK1_9PHAE6.580e-11681.72NADH dehydrogenase subunit 9 n=2 Tax=Lessoniaceae ... [more]
A0A0U1Z5T2_9PHAE1.110e-11585.33NADH dehydrogenase subunit 9 n=22 Tax=Sargassaceae... [more]
A0A1I9LW92_9PHAE1.040e-11283.06NADH dehydrogenase subunit 9 n=1 Tax=Pleurocladia ... [more]
Q94YZ7_PYLLI2.450e-11179.89NADH dehydrogenase subunit 9 n=1 Tax=Pylaiella lit... [more]
A0A8F0K105_9PHAE1.320e-11080.75NADH dehydrogenase subunit 9 n=1 Tax=Analipus japo... [more]
Q2TUA8_DICDH8.140e-9974.44NADH dehydrogenase subunit 9 n=1 Tax=Dictyota dich... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001268NADH:ubiquinone oxidoreductase, 30kDa subunitPFAMPF00329Complex1_30kDacoord: 45..165
e-value: 1.1E-42
score: 145.5
IPR010218NADH dehydrogenase, subunit CTIGRFAMTIGR01961TIGR01961coord: 43..163
e-value: 2.2E-43
score: 145.7
IPR010218NADH dehydrogenase, subunit CHAMAPMF_01357NDH1_NuoCcoord: 15..172
score: 30.559
IPR037232NADH:ubiquinone oxidoreductase, 30kDa subunit superfamilyGENE3D3.30.460.80coord: 13..144
e-value: 2.1E-39
score: 137.6
IPR037232NADH:ubiquinone oxidoreductase, 30kDa subunit superfamilySUPERFAMILY143243Nqo5-likecoord: 32..197
NoneNo IPR availablePANTHERPTHR10884:SF10NADH DEHYDROGENASE [UBIQUINONE] IRON-SULFUR PROTEIN 3, MITOCHONDRIALcoord: 23..198
NoneNo IPR availablePANTHERPTHR10884NADH DEHYDROGENASE UBIQUINONE IRON-SULFUR PROTEIN 3coord: 23..198
NoneNo IPR availablePRODOMPD001581coord: 93..151
e-value: 4.0E-26
score: 292.0
IPR020396NADH:ubiquinone oxidoreductase, 30kDa subunit, conserved sitePROSITEPS00542COMPLEX1_30Kcoord: 125..146

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig143643contigH-elongata_contig143643:1028..1633 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig143643.3006.1mRNA_H-elongata_contig143643.3006.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig143643 1028..1633 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig143643.3006.1 ID=prot_H-elongata_contig143643.3006.1|Name=mRNA_H-elongata_contig143643.3006.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=202bp
GTSLVAPGIKRYNKMFRYLIIYTVSLTRLLPIQTFKVFGHEIVISVSKKY
LLATLMFLHKHSNSSFQLLTSISGVDYPEREERFEIVYELLNVRSNCRIR
VKTHTDEINPLPSVVNIYPCANWWEREIWDLFGVFFSGHPDLRRLLTDYG
FEGHPLRKDFPLSGYFELRYDEDHRVVVCEPIELTQEFRSFDFHTPWSAD
IK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001268NADH_UbQ_OxRdtase_30kDa_su
IPR010218NADH_DH_suC
IPR037232NADH_quin_OxRdtase_su_C/D-like
IPR020396NADH_UbQ_OxRdtase_CS