prot_H-elongata_contig14354.2998.1 (polypeptide) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig14354.2998.1 vs. uniprot
Match: D7FWG1_ECTSI (Sm protein F n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FWG1_ECTSI) HSP 1 Score: 68.9 bits (167), Expect = 8.250e-14 Identity = 31/31 (100.00%), Postives = 31/31 (100.00%), Query Frame = 0
Query: 1 MATPVNPKPFLNELTGKPVMVKLKWGMEYKG 31
MATPVNPKPFLNELTGKPVMVKLKWGMEYKG
Sbjct: 1 MATPVNPKPFLNELTGKPVMVKLKWGMEYKG 31
BLAST of mRNA_H-elongata_contig14354.2998.1 vs. uniprot
Match: A0A8D2QFR0_ZONAL (Sm protein F n=1 Tax=Zonotrichia albicollis TaxID=44394 RepID=A0A8D2QFR0_ZONAL) HSP 1 Score: 63.9 bits (154), Expect = 4.490e-12 Identity = 30/54 (55.56%), Postives = 39/54 (72.22%), Query Frame = 0
Query: 1 MATPVNPKPFLNELTGKPVMVKLKWGMEYKGERAELFYFNPFLDVKKRLPNCQG 54
M+ P+NPKPFLN LTGKPVMVKLKWGMEYKG + + +++++ R P G
Sbjct: 1 MSLPLNPKPFLNGLTGKPVMVKLKWGMEYKGYLVSV---DGYMNMQVRAPALWG 51
BLAST of mRNA_H-elongata_contig14354.2998.1 vs. uniprot
Match: A0A177WM22_BATDL (Sm protein F n=2 Tax=Batrachochytrium dendrobatidis TaxID=109871 RepID=A0A177WM22_BATDL) HSP 1 Score: 63.2 bits (152), Expect = 6.880e-12 Identity = 27/28 (96.43%), Postives = 28/28 (100.00%), Query Frame = 0
Query: 4 PVNPKPFLNELTGKPVMVKLKWGMEYKG 31
PVNPKPFLNELTGKP+MVKLKWGMEYKG
Sbjct: 5 PVNPKPFLNELTGKPIMVKLKWGMEYKG 32
BLAST of mRNA_H-elongata_contig14354.2998.1 vs. uniprot
Match: A0A8B9WQI5_BOSMU (Sm domain-containing protein n=1 Tax=Bos mutus grunniens TaxID=30521 RepID=A0A8B9WQI5_BOSMU) HSP 1 Score: 63.2 bits (152), Expect = 1.020e-11 Identity = 29/52 (55.77%), Postives = 39/52 (75.00%), Query Frame = 0
Query: 1 MATPVNPKPFLNELTGKPVMVKLKWGMEYKGERAELFYFNPFLDVKKRLPNC 52
M+ P+NPKPFLN LTGKPVMVKLKWGMEYKG + + +++++ R +C
Sbjct: 1 MSLPLNPKPFLNGLTGKPVMVKLKWGMEYKGYLVSV---DGYMNMQVRTISC 49
BLAST of mRNA_H-elongata_contig14354.2998.1 vs. uniprot
Match: A0A1S4C443_TOBAC (Sm protein F n=23 Tax=Magnoliopsida TaxID=3398 RepID=A0A1S4C443_TOBAC) HSP 1 Score: 62.8 bits (151), Expect = 1.570e-11 Identity = 27/31 (87.10%), Postives = 29/31 (93.55%), Query Frame = 0
Query: 1 MATPVNPKPFLNELTGKPVMVKLKWGMEYKG 31
M+ PVNPKP+LN LTGKPVMVKLKWGMEYKG
Sbjct: 1 MSVPVNPKPYLNNLTGKPVMVKLKWGMEYKG 31
BLAST of mRNA_H-elongata_contig14354.2998.1 vs. uniprot
Match: A0A199VBT5_ANACO (Sm protein F n=1 Tax=Ananas comosus TaxID=4615 RepID=A0A199VBT5_ANACO) HSP 1 Score: 61.6 bits (148), Expect = 1.640e-11 Identity = 27/30 (90.00%), Postives = 28/30 (93.33%), Query Frame = 0
Query: 2 ATPVNPKPFLNELTGKPVMVKLKWGMEYKG 31
A PVNPKPFLN LTGKPV+VKLKWGMEYKG
Sbjct: 3 AVPVNPKPFLNNLTGKPVIVKLKWGMEYKG 32
BLAST of mRNA_H-elongata_contig14354.2998.1 vs. uniprot
Match: UPI001BF47C81 (Uncharacterized protein n=1 Tax=Carya illinoinensis TaxID=32201 RepID=UPI001BF47C81) HSP 1 Score: 62.4 bits (150), Expect = 1.870e-11 Identity = 28/36 (77.78%), Postives = 31/36 (86.11%), Query Frame = 0
Query: 1 MATPVNPKPFLNELTGKPVMVKLKWGMEYKGERAEL 36
M+ PVNPKPFLN LTGKPV+VKLKWGMEYKG A +
Sbjct: 1 MSIPVNPKPFLNNLTGKPVIVKLKWGMEYKGFLASV 36
BLAST of mRNA_H-elongata_contig14354.2998.1 vs. uniprot
Match: A0A8C3F3M8_CHRPI (Small nuclear ribonucleoprotein polypeptide F n=1 Tax=Chrysemys picta bellii TaxID=8478 RepID=A0A8C3F3M8_CHRPI) HSP 1 Score: 61.6 bits (148), Expect = 1.910e-11 Identity = 27/31 (87.10%), Postives = 29/31 (93.55%), Query Frame = 0
Query: 1 MATPVNPKPFLNELTGKPVMVKLKWGMEYKG 31
M+ P+NPKPFLN LTGKPVMVKLKWGMEYKG
Sbjct: 1 MSLPLNPKPFLNGLTGKPVMVKLKWGMEYKG 31
BLAST of mRNA_H-elongata_contig14354.2998.1 vs. uniprot
Match: A0A0D2J3N2_9CHLO (Sm protein F n=2 Tax=Selenastraceae TaxID=35466 RepID=A0A0D2J3N2_9CHLO) HSP 1 Score: 62.4 bits (150), Expect = 2.010e-11 Identity = 26/30 (86.67%), Postives = 29/30 (96.67%), Query Frame = 0
Query: 2 ATPVNPKPFLNELTGKPVMVKLKWGMEYKG 31
A PVNPKPF+NELTGKP++VKLKWGMEYKG
Sbjct: 4 AAPVNPKPFMNELTGKPIVVKLKWGMEYKG 33
BLAST of mRNA_H-elongata_contig14354.2998.1 vs. uniprot
Match: A0A6P9F5Z8_JUGRE (Sm protein F n=4 Tax=Mesangiospermae TaxID=1437183 RepID=A0A6P9F5Z8_JUGRE) HSP 1 Score: 62.4 bits (150), Expect = 2.220e-11 Identity = 28/36 (77.78%), Postives = 31/36 (86.11%), Query Frame = 0
Query: 1 MATPVNPKPFLNELTGKPVMVKLKWGMEYKGERAEL 36
M+ PVNPKPFLN LTGKPV+VKLKWGMEYKG A +
Sbjct: 1 MSIPVNPKPFLNNLTGKPVIVKLKWGMEYKGFLASV 36 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig14354.2998.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-elongata_contig14354.2998.1 ID=prot_H-elongata_contig14354.2998.1|Name=mRNA_H-elongata_contig14354.2998.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=59bpback to top |