prot_H-elongata_contig143461.2996.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig143461.2996.1
Unique Nameprot_H-elongata_contig143461.2996.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length74
Homology
BLAST of mRNA_H-elongata_contig143461.2996.1 vs. uniprot
Match: A0A5A7VLF6_CUCME (Retrotransposon protein, putative, Ty1-copia subclass n=1 Tax=Cucumis melo var. makuwa TaxID=1194695 RepID=A0A5A7VLF6_CUCME)

HSP 1 Score: 56.6 bits (135), Expect = 1.340e-7
Identity = 25/62 (40.32%), Postives = 42/62 (67.74%), Query Frame = 0
Query:    1 MATNRFSSRRTRYVDMKHHIVGDAVENSVVRIHYVKSREQRADFLTKALDANIFEVHARFSL 62
            ++ N     RT+++D++HH++G+ VE+ V+R+ +++S  Q AD  T +LDAN FE H R  L
Sbjct:  372 ISKNPVQHSRTKHIDIRHHLIGELVEDKVIRLDHIRSNLQLADIFTNSLDANSFE-HLRAGL 432          
BLAST of mRNA_H-elongata_contig143461.2996.1 vs. uniprot
Match: A0A392P663_9FABA (Peroxidase 4-like n=1 Tax=Trifolium medium TaxID=97028 RepID=A0A392P663_9FABA)

HSP 1 Score: 50.1 bits (118), Expect = 2.460e-6
Identity = 21/52 (40.38%), Postives = 34/52 (65.38%), Query Frame = 0
Query:    4 NRFSSRRTRYVDMKHHIVGDAVENSVVRIHYVKSREQRADFLTKALDANIFE 55
            N     RT+++D++HH +G+ VE+ VV + ++ + +Q AD  TK LDA  FE
Sbjct:   16 NLVQHSRTKHIDIRHHFIGELVEDKVVNLEHITTEKQLADIFTKPLDAVRFE 67          
BLAST of mRNA_H-elongata_contig143461.2996.1 vs. uniprot
Match: A0A5C7HAA4_9ROSI (Uncharacterized protein n=1 Tax=Acer yangbiense TaxID=1000413 RepID=A0A5C7HAA4_9ROSI)

HSP 1 Score: 52.4 bits (124), Expect = 3.420e-6
Identity = 24/55 (43.64%), Postives = 35/55 (63.64%), Query Frame = 0
Query:    1 MATNRFSSRRTRYVDMKHHIVGDAVENSVVRIHYVKSREQRADFLTKALDANIFE 55
            MA N     +TR++++KHH V +A+E   + + YV+S EQ AD LTKAL    F+
Sbjct:  184 MAKNPCFHSKTRHINIKHHFVREAIEEEEINLSYVRSEEQLADILTKALSTTNFQ 238          
BLAST of mRNA_H-elongata_contig143461.2996.1 vs. uniprot
Match: B8MCQ7_TALSN (Uncharacterized protein n=1 Tax=Talaromyces stipitatus (strain ATCC 10500 / CBS 375.48 / QM 6759 / NRRL 1006) TaxID=441959 RepID=B8MCQ7_TALSN)

HSP 1 Score: 49.3 bits (116), Expect = 9.720e-6
Identity = 18/50 (36.00%), Postives = 35/50 (70.00%), Query Frame = 0
Query:    8 SRRTRYVDMKHHIVGDAVENSVVRIHYVKSREQRADFLTKALDANIFEVH 57
            S R++++D++ H++ +A+ N ++R+ Y+++ E  AD LTKAL   + E H
Sbjct:   25 STRSKHIDIRFHVIREAIANGLIRLEYIRTTEMTADILTKALPKELHERH 74          
BLAST of mRNA_H-elongata_contig143461.2996.1 vs. uniprot
Match: A0A2K3P7V1_TRIPR (Gag-pol polyprotein (Fragment) n=2 Tax=Trifolium pratense TaxID=57577 RepID=A0A2K3P7V1_TRIPR)

HSP 1 Score: 51.2 bits (121), Expect = 1.100e-5
Identity = 22/55 (40.00%), Postives = 36/55 (65.45%), Query Frame = 0
Query:    1 MATNRFSSRRTRYVDMKHHIVGDAVENSVVRIHYVKSREQRADFLTKALDANIFE 55
            ++ N     RT+++D++HH + D VE+ +V + +V ++ Q AD  TKALDA  FE
Sbjct:  833 ISKNPIQHSRTKHIDIRHHFIRDLVEDKIVTLEHVATKNQLADIFTKALDAVQFE 887          
BLAST of mRNA_H-elongata_contig143461.2996.1 vs. uniprot
Match: A0A6H5JZG2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZG2_9PHAE)

HSP 1 Score: 50.8 bits (120), Expect = 1.480e-5
Identity = 21/63 (33.33%), Postives = 39/63 (61.90%), Query Frame = 0
Query:    1 MATNRFSSRRTRYVDMKHHIVGDAVENSVVRIHYVKSREQRADFLTKALDANIFEVHARFSLN 63
            +A N  ++  ++++D++HH + + VE   + I +  ++ Q ADFLTKA+    FE+H  F +N
Sbjct:  508 IALNPITNSNSKHIDIRHHFIRELVERKEISITHAPTQFQHADFLTKAISKESFELHRDFVMN 570          
BLAST of mRNA_H-elongata_contig143461.2996.1 vs. uniprot
Match: A0A225WD55_9STRA (Uncharacterized protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WD55_9STRA)

HSP 1 Score: 49.3 bits (116), Expect = 1.830e-5
Identity = 21/49 (42.86%), Postives = 33/49 (67.35%), Query Frame = 0
Query:    1 MATNRFSSRRTRYVDMKHHIVGDAVENSVVRIHYVKSREQRADFLTKAL 49
            +A N   + RT++VD+KHH   + VE   +++ Y+ ++ Q ADFLTKAL
Sbjct:   65 LAKNAGFNSRTKHVDIKHHFTRENVERGTIKVDYIDTKRQLADFLTKAL 113          
BLAST of mRNA_H-elongata_contig143461.2996.1 vs. uniprot
Match: A0A6L2JSQ0_TANCI (Copia protein n=1 Tax=Tanacetum cinerariifolium TaxID=118510 RepID=A0A6L2JSQ0_TANCI)

HSP 1 Score: 48.9 bits (115), Expect = 2.640e-5
Identity = 19/55 (34.55%), Postives = 34/55 (61.82%), Query Frame = 0
Query:    1 MATNRFSSRRTRYVDMKHHIVGDAVENSVVRIHYVKSREQRADFLTKALDANIFE 55
            +    F   R++++D++HH +G+ VEN VV ++++++  Q AD  T AL    FE
Sbjct:   73 LCCKNFQHSRSKHIDIRHHFIGEEVENEVVELYFMRTEYQLADIFTNALPRERFE 127          
BLAST of mRNA_H-elongata_contig143461.2996.1 vs. uniprot
Match: A0A5A7UJ23_CUCME (Integrase catalytic domain-containing protein n=1 Tax=Cucumis melo var. makuwa TaxID=1194695 RepID=A0A5A7UJ23_CUCME)

HSP 1 Score: 50.1 bits (118), Expect = 2.830e-5
Identity = 25/46 (54.35%), Postives = 32/46 (69.57%), Query Frame = 0
Query:   10 RTRYVDMKHHIVGDAVENSVVRIHYVKSREQRADFLTKALDANIFE 55
            RT+++D+K H V D +E  VV+I  VKS E  ADFLTKAL  + FE
Sbjct:  950 RTKHIDVKLHFVRDIIEKGVVKILKVKSEENAADFLTKALPKSKFE 995          
BLAST of mRNA_H-elongata_contig143461.2996.1 vs. uniprot
Match: A0A177TGX8_9BASI (Uncharacterized protein n=1 Tax=Tilletia indica TaxID=43049 RepID=A0A177TGX8_9BASI)

HSP 1 Score: 50.1 bits (118), Expect = 2.850e-5
Identity = 21/49 (42.86%), Postives = 35/49 (71.43%), Query Frame = 0
Query:    9 RRTRYVDMKHHIVGDAVENSVVRIHYVKSREQRADFLTKALDANIFEVH 57
            RRT+++D+K+H++ + V++  V + Y+++ EQ AD LTKAL  N  E H
Sbjct: 1369 RRTKHIDVKYHLIREHVKDKTVSLRYIRTHEQCADVLTKALPRNSHERH 1417          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig143461.2996.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 12
Match NameE-valueIdentityDescription
A0A5A7VLF6_CUCME1.340e-740.32Retrotransposon protein, putative, Ty1-copia subcl... [more]
A0A392P663_9FABA2.460e-640.38Peroxidase 4-like n=1 Tax=Trifolium medium TaxID=9... [more]
A0A5C7HAA4_9ROSI3.420e-643.64Uncharacterized protein n=1 Tax=Acer yangbiense Ta... [more]
B8MCQ7_TALSN9.720e-636.00Uncharacterized protein n=1 Tax=Talaromyces stipit... [more]
A0A2K3P7V1_TRIPR1.100e-540.00Gag-pol polyprotein (Fragment) n=2 Tax=Trifolium p... [more]
A0A6H5JZG2_9PHAE1.480e-533.33Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A225WD55_9STRA1.830e-542.86Uncharacterized protein n=1 Tax=Phytophthora megak... [more]
A0A6L2JSQ0_TANCI2.640e-534.55Copia protein n=1 Tax=Tanacetum cinerariifolium Ta... [more]
A0A5A7UJ23_CUCME2.830e-554.35Integrase catalytic domain-containing protein n=1 ... [more]
A0A177TGX8_9BASI2.850e-542.86Uncharacterized protein n=1 Tax=Tilletia indica Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig143461contigH-elongata_contig143461:511..732 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig143461.2996.1mRNA_H-elongata_contig143461.2996.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig143461 240..1126 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig143461.2996.1 ID=prot_H-elongata_contig143461.2996.1|Name=mRNA_H-elongata_contig143461.2996.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=74bp
MATNRFSSRRTRYVDMKHHIVGDAVENSVVRIHYVKSREQRADFLTKALD
ANIFEVHARFSLNARAGSTMVLG*
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