prot_H-elongata_contig14346.2995.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig14346.2995.1
Unique Nameprot_H-elongata_contig14346.2995.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length361
Homology
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BLAST of mRNA_H-elongata_contig14346.2995.1 vs. uniprot
Match: D8LLZ4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLZ4_ECTSI)

HSP 1 Score: 172 bits (435), Expect = 1.260e-44
Identity = 240/403 (59.55%), Postives = 275/403 (68.24%), Query Frame = 0 
Query:    1 GHADVVRLLIEQHGASVDARDGALCTALHAASEGGHPVVVELLLRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADPSSRDANGMQAIDMIGVKRQISKEVRSNFLHTLERYILGDFASARAPLSSAKSLRQVQVWRGRDD--------VARVSFAASEAPMGV--------------------------------------RANSSLARGVTAPYDGFSTVAGGGGVKEGKLGGFGGRVGAPRGSGDGRSEGFRAAGELERGKLGVEEVGGRSPRWSVGTAVAGRLEEMRARELGASLRAKVQENEAMKRHLDSVKEEMRMLQRKVLEQS 357
            GH +VV+LL+E+H A+VDARDGALCT LHAASEGGHPVVVELLLR    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADPS++DA+G QAIDM+G  R+I + +R + ++TLERY +G++A ARAPLSS +SLRQ+  WR RD          AR     S A  G                                           S++R  +   DGFST + G        GG GG   + RG+    S    + G+             RSPRW+VG AVAGRLE MRARELGASLRAKVQENEAMKR+++SV EEMR LQ+K+ +QS
Sbjct:    2 GHTNVVKLLVEEHRAAVDARDGALCTPLHAASEGGHPVVVELLLRLGAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADPSAKDAHGKQAIDMVGAGRRIPQGLRFDIINTLERYQMGEYAIARAPLSSTRSLRQM--WRDRDSGESTPRASTARAGSLPSSAVGGAGQGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTIYSSRGGSISRKGSMSLDGFSTASMG-------AGGEGGGPLSVRGAAMRHSSRGFSEGDXXXXXXXXXXXXXRSPRWTVGAAVAGRLEGMRARELGASLRAKVQENEAMKRYVESVTEEMRALQQKISQQS 395
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BLAST of mRNA_H-elongata_contig14346.2995.1 vs. uniprot
Match: A0A6H5JD62_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JD62_9PHAE)

HSP 1 Score: 125 bits (314), Expect = 4.710e-28
Identity = 102/242 (42.15%), Postives = 128/242 (52.89%), Query Frame = 0 
Query:  147 ADPSSRDANGMQAIDMIGVKRQISKEVRSNFLHTLERYILGDFASARAPLSSAKSLRQVQVWRGRDD---VARVSFA-ASEAPMGVRANS-----------------------------------------SLARGVTAPYDGFSTVA-GGGGVKEGKLGGFGGRVGAPRGSGDGRSEGFRAAGELERGKLGVEEVGGRSPRWSVGTAVAGRLEEMRARELGASLRAKVQENEAMKRHLDSV 342
            ADPS++DA+G QA+DM+G  R+I + ++ + ++TLERY +G++  ARAPLSS +SLRQ+  WR RD      R S A A   P G    +                                         S++R  +   DGFST + G GG   G L     R  A R S  G SEG            G    GGRSPRW+VG AVAGRLE MRARELGASLRAKVQENEAMKR+++SV
Sbjct:  270 ADPSAKDAHGKQAVDMVGAGRRIPQGLKFDIINTLERYQMGEYGIARAPLSSTRSLRQI--WRDRDSGESTPRASTARAGSLPSGAGGEAGQGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTIYSSRGGSISRKGSMSLDGFSTASMGAGGEGGGPLSV---RGAAMRHSSRGFSEGD-----------GRGNGGGRSPRWTVGAAVAGRLEGMRARELGASLRAKVQENEAMKRYVESV 495
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig14346.2995.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LLZ4_ECTSI1.260e-4459.55Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JD62_9PHAE4.710e-2842.15Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 325..359
NoneNo IPR availablePFAMPF13857Ank_5coord: 12..64
e-value: 4.7E-9
score: 36.3
NoneNo IPR availablePANTHERPTHR24180FAMILY NOT NAMEDcoord: 35..162
coord: 1..81
IPR002110Ankyrin repeatPRINTSPR01415ANKYRINcoord: 90..105
score: 41.92
coord: 138..152
score: 35.88
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 122..151
e-value: 2.7E-4
score: 30.3
coord: 89..118
e-value: 0.0016
score: 27.7
coord: 23..52
e-value: 0.0018
score: 27.5
coord: 56..85
e-value: 0.052
score: 22.7
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 26..55
score: 11.3
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 122..154
score: 13.517
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 56..88
score: 11.381
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 89..121
score: 13.464
IPR020683Ankyrin repeat-containing domainPFAMPF12796Ank_2coord: 79..153
e-value: 2.5E-15
score: 56.8
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 1..160
score: 50.003
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 61..185
e-value: 5.9E-34
score: 119.7
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 1..60
e-value: 1.3E-19
score: 72.3
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 1..162

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig14346contigH-elongata_contig14346:4544..8004 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig14346.2995.1mRNA_H-elongata_contig14346.2995.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig14346 4544..8004 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig14346.2995.1 ID=prot_H-elongata_contig14346.2995.1|Name=mRNA_H-elongata_contig14346.2995.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=361bp
GHADVVRLLIEQHGASVDARDGALCTALHAASEGGHPVVVELLLRFGAEI
DARNGKGQTPLHYACGYGQVDAAQQLTLRGASTGARDIQGNTPLHLACSG
GEADIVRLLLVNGSPLQAVNHRGRRPLHLACRSGYLDIAIALLENGADPS
SRDANGMQAIDMIGVKRQISKEVRSNFLHTLERYILGDFASARAPLSSAK
SLRQVQVWRGRDDVARVSFAASEAPMGVRANSSLARGVTAPYDGFSTVAG
GGGVKEGKLGGFGGRVGAPRGSGDGRSEGFRAAGELERGKLGVEEVGGRS
PRWSVGTAVAGRLEEMRARELGASLRAKVQENEAMKRHLDSVKEEMRMLQ
RKVLEQSSARS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR020683Ankyrin_rpt-contain_dom
IPR036770Ankyrin_rpt-contain_sf