prot_H-elongata_contig143210.2984.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig143210.2984.1
Unique Nameprot_H-elongata_contig143210.2984.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length53
Homology
BLAST of mRNA_H-elongata_contig143210.2984.1 vs. uniprot
Match: D7FJJ0_ECTSI (D-3-phosphoglycerate dehydrogenase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJJ0_ECTSI)

HSP 1 Score: 99.0 bits (245), Expect = 6.930e-23
Identity = 45/50 (90.00%), Postives = 48/50 (96.00%), Query Frame = 0
Query:    3 RRIPEADISMKLGKWERKKFMGLELKGKTLAIVGCGRIGQMVAQWAQGFE 52
            RRIPEADISMK GKWERKKFMG ELKGKT+AIVGCGRIGQMVA+WAQGF+
Sbjct:  195 RRIPEADISMKAGKWERKKFMGQELKGKTIAIVGCGRIGQMVAKWAQGFD 244          
BLAST of mRNA_H-elongata_contig143210.2984.1 vs. uniprot
Match: A0A835Z0M8_9STRA (D-3-phosphoglycerate dehydrogenase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0M8_9STRA)

HSP 1 Score: 87.8 bits (216), Expect = 5.840e-19
Identity = 40/49 (81.63%), Postives = 43/49 (87.76%), Query Frame = 0
Query:    3 RRIPEADISMKLGKWERKKFMGLELKGKTLAIVGCGRIGQMVAQWAQGF 51
            RRI EAD SMK GKWERKKFMG EL GKT+A+VGCGRIGQ VA+WAQGF
Sbjct:  144 RRISEADASMKSGKWERKKFMGTELGGKTIAVVGCGRIGQQVAKWAQGF 192          
BLAST of mRNA_H-elongata_contig143210.2984.1 vs. uniprot
Match: A0A6U4F3N0_9STRA (D-3-phosphoglycerate dehydrogenase n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4F3N0_9STRA)

HSP 1 Score: 79.0 bits (193), Expect = 7.660e-16
Identity = 36/46 (78.26%), Postives = 40/46 (86.96%), Query Frame = 0
Query:    3 RRIPEADISMKLGKWERKKFMGLELKGKTLAIVGCGRIGQMVAQWA 48
            R IP AD+SMK GKWERK F G+ELKGKTLAIVGCGRIG +VA+WA
Sbjct:  140 RSIPAADMSMKAGKWERKAFSGVELKGKTLAIVGCGRIGMVVAKWA 185          
BLAST of mRNA_H-elongata_contig143210.2984.1 vs. uniprot
Match: W7T1C1_9STRA (D-3-phosphoglycerate dehydrogenase n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7T1C1_9STRA)

HSP 1 Score: 78.2 bits (191), Expect = 1.400e-15
Identity = 34/50 (68.00%), Postives = 39/50 (78.00%), Query Frame = 0
Query:    3 RRIPEADISMKLGKWERKKFMGLELKGKTLAIVGCGRIGQMVAQWAQGFE 52
            R +  AD+SMK GKWER K MG EL GKTLA+VGCGRIGQ VA+W Q F+
Sbjct:   26 RSLARADMSMKAGKWERSKLMGTELAGKTLAVVGCGRIGQQVAKWGQAFD 75          
BLAST of mRNA_H-elongata_contig143210.2984.1 vs. uniprot
Match: A0A4D9D253_9STRA (D-3-phosphoglycerate dehydrogenase n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D253_9STRA)

HSP 1 Score: 78.2 bits (191), Expect = 1.430e-15
Identity = 34/50 (68.00%), Postives = 39/50 (78.00%), Query Frame = 0
Query:    3 RRIPEADISMKLGKWERKKFMGLELKGKTLAIVGCGRIGQMVAQWAQGFE 52
            R +  AD+SMK GKWER K MG EL GKTLA+VGCGRIGQ VA+W Q F+
Sbjct:  150 RSLARADMSMKAGKWERSKLMGTELAGKTLAVVGCGRIGQQVAKWGQAFD 199          
BLAST of mRNA_H-elongata_contig143210.2984.1 vs. uniprot
Match: A0A7S2V587_9STRA (Phosphoglycerate dehydrogenase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V587_9STRA)

HSP 1 Score: 77.4 bits (189), Expect = 2.550e-15
Identity = 35/47 (74.47%), Postives = 42/47 (89.36%), Query Frame = 0
Query:    3 RRIPEADISMKLGKWERKKFMGLELKGKTLAIVGCGRIGQMVAQWAQ 49
            R +  AD+SMK GK+ERKK+MG+ELKGKTLA+VGCGRIGQ VA+WAQ
Sbjct:   26 RNVAAADMSMKEGKFERKKYMGVELKGKTLAVVGCGRIGQTVAKWAQ 72          
BLAST of mRNA_H-elongata_contig143210.2984.1 vs. uniprot
Match: A0A7W0RRJ3_9BACT (D-3-phosphoglycerate dehydrogenase (Fragment) n=1 Tax=Pyrinomonadaceae bacterium TaxID=2283092 RepID=A0A7W0RRJ3_9BACT)

HSP 1 Score: 77.0 bits (188), Expect = 3.620e-15
Identity = 33/52 (63.46%), Postives = 45/52 (86.54%), Query Frame = 0
Query:    1 ILRRIPEADISMKLGKWERKKFMGLELKGKTLAIVGCGRIGQMVAQWAQGFE 52
            + RR+P+A+ S++ GKWERKKF+G+EL+GKTL +VG GRIGQ+VA  A+GFE
Sbjct:  111 LARRVPQANSSLRAGKWERKKFVGVELRGKTLGVVGLGRIGQVVASRARGFE 162          
BLAST of mRNA_H-elongata_contig143210.2984.1 vs. uniprot
Match: A0A7R9U7T3_9STRA (D-3-phosphoglycerate dehydrogenase n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U7T3_9STRA)

HSP 1 Score: 76.6 bits (187), Expect = 4.980e-15
Identity = 34/51 (66.67%), Postives = 40/51 (78.43%), Query Frame = 0
Query:    1 ILRRIPEADISMKLGKWERKKFMGLELKGKTLAIVGCGRIGQMVAQWAQGF 51
            + R IP ADISMK GKWERK F G+E+ GKTLAIVGCGRIG +VA+W +  
Sbjct:  138 VARSIPAADISMKAGKWERKAFSGVEISGKTLAIVGCGRIGLVVAKWCKAL 188          
BLAST of mRNA_H-elongata_contig143210.2984.1 vs. uniprot
Match: A0A0B6WXV8_9BACT (D-3-phosphoglycerate dehydrogenase n=1 Tax=Pyrinomonas methylaliphatogenes TaxID=454194 RepID=A0A0B6WXV8_9BACT)

HSP 1 Score: 76.3 bits (186), Expect = 6.790e-15
Identity = 34/52 (65.38%), Postives = 43/52 (82.69%), Query Frame = 0
Query:    1 ILRRIPEADISMKLGKWERKKFMGLELKGKTLAIVGCGRIGQMVAQWAQGFE 52
            + RRIP+A  S+K G+WERKKF+G EL+GKTL I+G GRIG++VA  AQGFE
Sbjct:  114 LARRIPQAHASLKAGRWERKKFVGTELRGKTLGIIGLGRIGRVVASRAQGFE 165          
BLAST of mRNA_H-elongata_contig143210.2984.1 vs. uniprot
Match: UPI0019C6E186 (Phosphoglycerate dehydrogenase n=1 Tax=Rubrivivax sp. TaxID=50259 RepID=UPI0019C6E186)

HSP 1 Score: 75.9 bits (185), Expect = 9.270e-15
Identity = 32/52 (61.54%), Postives = 44/52 (84.62%), Query Frame = 0
Query:    1 ILRRIPEADISMKLGKWERKKFMGLELKGKTLAIVGCGRIGQMVAQWAQGFE 52
            + RR+P+ D S+K G+WERKKF+G+EL+GKTL +VG GRIG++VA  A+GFE
Sbjct:  114 LARRVPQGDASLKSGRWERKKFVGVELRGKTLGVVGLGRIGRVVASRARGFE 165          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig143210.2984.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FJJ0_ECTSI6.930e-2390.00D-3-phosphoglycerate dehydrogenase n=1 Tax=Ectocar... [more]
A0A835Z0M8_9STRA5.840e-1981.63D-3-phosphoglycerate dehydrogenase n=1 Tax=Tribone... [more]
A0A6U4F3N0_9STRA7.660e-1678.26D-3-phosphoglycerate dehydrogenase n=1 Tax=Phaeomo... [more]
W7T1C1_9STRA1.400e-1568.00D-3-phosphoglycerate dehydrogenase n=2 Tax=Nannoch... [more]
A0A4D9D253_9STRA1.430e-1568.00D-3-phosphoglycerate dehydrogenase n=1 Tax=Nannoch... [more]
A0A7S2V587_9STRA2.550e-1574.47Phosphoglycerate dehydrogenase n=1 Tax=Fibrocapsa ... [more]
A0A7W0RRJ3_9BACT3.620e-1563.46D-3-phosphoglycerate dehydrogenase (Fragment) n=1 ... [more]
A0A7R9U7T3_9STRA4.980e-1566.67D-3-phosphoglycerate dehydrogenase n=1 Tax=Pinguio... [more]
A0A0B6WXV8_9BACT6.790e-1565.38D-3-phosphoglycerate dehydrogenase n=1 Tax=Pyrinom... [more]
UPI0019C6E1869.270e-1561.54Phosphoglycerate dehydrogenase n=1 Tax=Rubrivivax ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.720coord: 2..52
e-value: 6.6E-18
score: 66.3
NoneNo IPR availablePANTHERPTHR42938:SF5D-3-PHOSPHOGLYCERATE DEHYDROGENASEcoord: 2..51
NoneNo IPR availablePANTHERPTHR42938FAMILY NOT NAMEDcoord: 2..51
IPR006140D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domainPFAMPF028262-Hacid_dh_Ccoord: 2..52
e-value: 1.0E-12
score: 47.8
IPR036291NAD(P)-binding domain superfamilySUPERFAMILY51735NAD(P)-binding Rossmann-fold domainscoord: 2..51

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig143210contigH-elongata_contig143210:405..563 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig143210.2984.1mRNA_H-elongata_contig143210.2984.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig143210 405..563 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig143210.2984.1 ID=prot_H-elongata_contig143210.2984.1|Name=mRNA_H-elongata_contig143210.2984.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=53bp
ILRRIPEADISMKLGKWERKKFMGLELKGKTLAIVGCGRIGQMVAQWAQG
FE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006140D-isomer_DH_NAD-bd
IPR036291NAD(P)-bd_dom_sf