prot_H-elongata_contig14317.2980.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig14317.2980.1
Unique Nameprot_H-elongata_contig14317.2980.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length286
Homology
BLAST of mRNA_H-elongata_contig14317.2980.1 vs. uniprot
Match: A0A6H5KXE1_9PHAE (START domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXE1_9PHAE)

HSP 1 Score: 422 bits (1086), Expect = 3.510e-146
Identity = 217/285 (76.14%), Postives = 247/285 (86.67%), Query Frame = 0
Query:    2 NMDQEENIAVRTERLGVKVYGVVNESAHAAAGGLPVVRAAQTLIKAPIEDIATSWWQAGKRKEWDSVNTKDSQLVRSLTSDARLVYLQGKPKRGGIVSSRDFCYVMYRAPPELIGAKPGSVLFVQANAAMEVPRNNASTRGDVNSLLLLEPVDPITTKAFYAIEVDVKGWLPIKVVKAAADETPLTLAVLRDHIEKELMEEASLGADAAAKHAQHAVHRRENEDG-SGRSPIAGAWASREDLLEAKKLLEKQLKKASAEERKTGIDLSGLRAHIKEEIAQIDRRL 285
            N++  + I +R  +LGVKVY VV+++AH AAGGLPVVR AQ LIKAP++D+A  WWQAG+RKEWDSVNT DSQLVRSL  DARLVY+QGKPKRGG++SSRDFCYV ++AP EL+GAKPGS LFVQANAA EVP NNASTRGDVNS+LLL PVDPITT+A+YAIE+DVKGWLP+KVVKAAADE PLTLAVLRDHIEKEL EEASL  +AAAKHA   VHRRE+ +G SG   IAGAWA+REDLLE KKLLEKQLKK SA+ERK GIDLS LR HIKEEIA++DRRL
Sbjct:   65 NIEDPDKITLRANKLGVKVYDVVDQAAHKAAGGLPVVRVAQALIKAPVDDVALCWWQAGRRKEWDSVNTSDSQLVRSLAPDARLVYMQGKPKRGGMISSRDFCYVSHKAPLELVGAKPGSTLFVQANAANEVPLNNASTRGDVNSVLLLVPVDPITTRAYYAIEMDVKGWLPVKVVKAAADEIPLTLAVLRDHIEKELSEEASLSPEAAAKHA---VHRREDSEGKSGGESIAGAWATREDLLETKKLLEKQLKKVSADERKMGIDLSELRKHIKEEIAEVDRRL 346          
BLAST of mRNA_H-elongata_contig14317.2980.1 vs. uniprot
Match: D8LQJ8_ECTSI (START domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQJ8_ECTSI)

HSP 1 Score: 332 bits (851), Expect = 7.320e-112
Identity = 162/211 (76.78%), Postives = 187/211 (88.63%), Query Frame = 0
Query:    2 NMDQEENIAVRTERLGVKVYGVVNESAHAAAGGLPVVRAAQTLIKAPIEDIATSWWQAGKRKEWDSVNTKDSQLVRSLTSDARLVYLQGKPKRGGIVSSRDFCYVMYRAPPELIGAKPGSVLFVQANAAMEVPRNNASTRGDVNSLLLLEPVDPITTKAFYAIEVDVKGWLPIKVVKAAADETPLTLAVLRDHIEKELMEEASLGADAAAK 212
            N++  + I +R ++LGVKVY VV+++AH AAGGLPVVR AQ LIKAP+ED+A  WWQAG+RKEWDSVNT DSQLVRSL  DARLVY+QGKPKRGG++SSRDFCYV ++AP EL+GAKPGS LFVQANAA EVP NNASTRGDVNS+LLL PVDPITT+A+YAIE+DVKGWLP+KVVKAAADE PLTLAVLRDHIEKEL +EASL  +AAAK
Sbjct:   41 NIEDSDKITLRADKLGVKVYDVVDQAAHKAAGGLPVVRVAQALIKAPVEDVALCWWQAGRRKEWDSVNTSDSQLVRSLAPDARLVYMQGKPKRGGMISSRDFCYVSHKAPLELVGAKPGSTLFVQANAANEVPPNNASTRGDVNSVLLLVPVDPITTRAYYAIEMDVKGWLPVKVVKAAADEIPLTLAVLRDHIEKELSDEASLSPEAAAK 251          
BLAST of mRNA_H-elongata_contig14317.2980.1 vs. uniprot
Match: A0A835YTY3_9STRA (START domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTY3_9STRA)

HSP 1 Score: 263 bits (672), Expect = 1.260e-84
Identity = 123/187 (65.78%), Postives = 153/187 (81.82%), Query Frame = 0
Query:   12 RTERLGVKVYGVVNESAHAAAGGLPVVRAAQTLIKAPIEDIATSWWQAGKRKEWDSVNTKDSQLVRSLTSDARLVYLQGKPKRGGIVSSRDFCYVMYRAPPELIGAKPGSVLFVQANAAMEVPRNNASTRGDVNSLLLLEPVDPITTKAFYAIEVDVKGWLPIKVVKAAADETPLTLAVLRDHIEKE 198
            RT+  GV +Y V NE+AH+ AGGLPVVR A+ +IKAP+ ++A  WW    RK+WDSVNT+D QLV++L +D RLVYLQGKPKRGG++SSRDF YVM+R P + +GA+ GS LF+Q N A EVP N++S RGDVNSLLLLEP+D  TT+A YAIE+DVKGWLP KVV AAADETPLTLAV+RDH+E++
Sbjct:   72 RTDLNGVTIYSVTNEAAHSKAGGLPVVRVAEAVIKAPVAEVAALWWHVQSRKDWDSVNTQDCQLVKALGTDERLVYLQGKPKRGGVISSRDFAYVMHRVPAQELGARTGSALFIQTNTASEVPANSSSVRGDVNSLLLLEPLDATTTRARYAIEIDVKGWLPTKVVNAAADETPLTLAVMRDHLERQ 258          
BLAST of mRNA_H-elongata_contig14317.2980.1 vs. uniprot
Match: A0A4D9DBA7_9STRA (START domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DBA7_9STRA)

HSP 1 Score: 185 bits (469), Expect = 2.670e-52
Identity = 113/285 (39.65%), Postives = 167/285 (58.60%), Query Frame = 0
Query:    6 EENIAVRTERLGVKVYGVVNESAHAAA-----GGLPVVRAAQTLIKAPIEDIATSWWQAGKRKEWDSVNTKDSQLVRSLTSDARLVYLQGKPKRGGIVSSRDFCYVMYRAPPELIGAKPGSVLFVQANAAMEVPRNNASTRGDVNSLLLLEPVDPITTKAFYAIEVDVKGWLPIKVVKAAADETPLTLAVLRDHIEKELMEEASLGADAAAKHAQHAVHRRENEDGSGRSPIAGAWASREDLLEAKKLLEKQLKKASAEERKTGIDLSGLRAHIKEEIAQIDRRL 285
            EE    + E+ GVK+Y V   S    A      GLPV R  + +I AP+E +AT WW    R  WD VNT  S++V     +ARLVY++G PK   ++SSRDF +V ++ P   +G   G+  FVQ NAA  +P N+ + RG++NS++LLEPVD  TT+  Y  E++ KGWLP   V+AAAD+ P  L V++ H+E E  E      DA A   + A  R +  D +    +    ASREDLL  KKLL+ +L++A  +E+K  + L+ L++ I+ ++ +++ RL
Sbjct:  126 EEVAKFKKEKAGVKIYTVKEGSIPDPAIGGRKTGLPVARIGEAVINAPLEQVATLWWVFNGRILWDKVNTLASEVVEEY-KNARLVYIKGTPKP--MISSRDFVFVSHKVPAGDLGGSFGAQAFVQTNAANSLPENSGAVRGNINSIILLEPVDGYTTRVRYVCEIEPKGWLPTMAVEAAADDLPGVLGVMKAHLESEATE------DAEALVRRRASLREK--DHTHPLLVDSVTASREDLLALKKLLQTKLEEAKRDEKKLNLSLAELKSKIQNDLKKVEARL 399          
BLAST of mRNA_H-elongata_contig14317.2980.1 vs. uniprot
Match: W7TWL2_9STRA (Lipid-binding START n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TWL2_9STRA)

HSP 1 Score: 128 bits (322), Expect = 6.340e-33
Identity = 74/189 (39.15%), Postives = 116/189 (61.38%), Query Frame = 0
Query:   97 IVSSRDFCYVMYRAPPELIGAKPGSVLFVQANAAMEVPRNNASTRGDVNSLLLLEPVDPITTKAFYAIEVDVKGWLPIKVVKAAADETPLTLAVLRDHIEKELMEEASLGADAAAKHAQHAVHRRENEDGSGRSPIAGAWASREDLLEAKKLLEKQLKKASAEERKTGIDLSGLRAHIKEEIAQIDRRL 285
            ++SSRDF +V ++ P   +G   G+  FVQ NAA  +P N+ + RG++NS++LLEPVD  TT+  Y  E++ KGWLP   V+AAAD+ P  L V++ H+E E  E      DA A   + A  R +  D +    +    ASREDLL  KKLL+ +L++A  +E+K  + L+ L++ I+ ++ +++ RL
Sbjct:    1 MISSRDFVFVSHKVPAGDLGGSFGAQAFVQTNAANTLPENSGAVRGNINSIILLEPVDGYTTRVRYVCEIEPKGWLPTMAVEAAADDLPGVLGVMKAHLESEATE------DAEALVRRRASLREK--DHTHPLLVDSVTASREDLLALKKLLQTKLEEAKRDEKKLNLSLAELKSKIQNDLKKVEARL 181          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig14317.2980.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A6H5KXE1_9PHAE3.510e-14676.14START domain-containing protein n=1 Tax=Ectocarpus... [more]
D8LQJ8_ECTSI7.320e-11276.78START domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A835YTY3_9STRA1.260e-8465.78START domain-containing protein n=1 Tax=Tribonema ... [more]
A0A4D9DBA7_9STRA2.670e-5239.65START domain-containing protein n=2 Tax=Monodopsid... [more]
W7TWL2_9STRA6.340e-3339.15Lipid-binding START n=1 Tax=Nannochloropsis gadita... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 239..262
NoneNo IPR availableSUPERFAMILY55961Bet v1-likecoord: 36..197
IPR002913START domainPFAMPF01852STARTcoord: 35..181
e-value: 8.4E-7
score: 28.6
IPR002913START domainPROSITEPS50848STARTcoord: 62..180
score: 12.082
IPR023393START-like domain superfamilyGENE3D3.30.530.20coord: 2..203
e-value: 7.4E-20
score: 73.3

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig14317contigH-elongata_contig14317:2254..6121 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig14317.2980.1mRNA_H-elongata_contig14317.2980.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig14317 2..6556 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig14317.2980.1 ID=prot_H-elongata_contig14317.2980.1|Name=mRNA_H-elongata_contig14317.2980.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=286bp
MNMDQEENIAVRTERLGVKVYGVVNESAHAAAGGLPVVRAAQTLIKAPIE
DIATSWWQAGKRKEWDSVNTKDSQLVRSLTSDARLVYLQGKPKRGGIVSS
RDFCYVMYRAPPELIGAKPGSVLFVQANAAMEVPRNNASTRGDVNSLLLL
EPVDPITTKAFYAIEVDVKGWLPIKVVKAAADETPLTLAVLRDHIEKELM
EEASLGADAAAKHAQHAVHRRENEDGSGRSPIAGAWASREDLLEAKKLLE
KQLKKASAEERKTGIDLSGLRAHIKEEIAQIDRRL*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002913START_lipid-bd_dom
IPR023393START-like_dom_sf