mRNA_H-elongata_contig143143.2978.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig143143.2978.1 vs. uniprot
Match: D8LG95_ECTSI (Peptidase S1 and S6, chymotrypsin/Hap n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LG95_ECTSI) HSP 1 Score: 177 bits (449), Expect = 6.110e-49 Identity = 90/173 (52.02%), Postives = 112/173 (64.74%), Query Frame = 1
Query: 10 LIRQEGGVIVAEVQADLDGHGVSVVSHEEINIYQSTKSLRIAGEGFKDGVK------------------------------------NVGSLPGPLVLLAANVGDGWVPLGPTVAKAGRKVATVYEDPSVLPNDIEIFRTHSHALMIKGTGFNKLTRPIIDFEPQLDSAQVYV 420
L +GG+++AEVQADLD HGV+V HE +++YQS+KS +I+G GF DG K N +LPG LVLLAA+ GDGWVPLGPT AKAG KVATV+EDPSV +D+EI+RTH+H L I+GTGFNK+ RP++DFEP LDS VYV
Sbjct: 200 LNSDDGGIVIAEVQADLDHHGVTVQGHESLDLYQSSKSFQISGSGFVDGTKVRFANALRGGGTNFTITDSQPELLTLELAEGSKWRKNPSALPGALVLLAADSGDGWVPLGPTQAKAGSKVATVFEDPSVEASDVEIYRTHTHELQIRGTGFNKVVRPVLDFEPALDSTSVYV 372
BLAST of mRNA_H-elongata_contig143143.2978.1 vs. uniprot
Match: A0A6H5JWG4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWG4_9PHAE) HSP 1 Score: 145 bits (366), Expect = 1.100e-37 Identity = 91/235 (38.72%), Postives = 110/235 (46.81%), Query Frame = 1
Query: 22 EGGVIVAEVQADLDGHGVSVVSHEEINIYQSTKSLRIAGEGFKDGVK------------------------------------------------------------------------NVGSLPGPLVLLAANVGDGWVPLGPTVAKAGRKVATVYEDPSVLPNDIEIFRTHSHALMIKGTGF------------------------------NKLTRPIIDFEPQLDSAQVYV 420
+GGVI+AEVQADLD HGV+V HE ++IYQSTK+ I+G GF DG K N +LPG LVLLAA+ GDGWVPLGPT AKAG KVATV+EDPSV +D+EI+RTH+H L I+GTG NK+ RP++DFEP LDS+ VYV
Sbjct: 81 DGGVIIAEVQADLDHHGVTVQGHESLDIYQSTKTFHISGSGFVDGTKVRFANALRGGGTNFTITDSQPELLTLELTEGSKWRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKNPSALPGVLVLLAADSGDGWVPLGPTQAKAGSKVATVFEDPSVEASDVEIYRTHTHELQIRGTGLLKXGXXXXXXXXXXXXXXXXXXXXXXXXXXNKVFRPVLDFEPVLDSSSVYV 315
BLAST of mRNA_H-elongata_contig143143.2978.1 vs. uniprot
Match: D7FRK3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRK3_ECTSI) HSP 1 Score: 132 bits (331), Expect = 4.100e-34 Identity = 77/168 (45.83%), Postives = 99/168 (58.93%), Query Frame = 1
Query: 7 LLIRQE-GGVIVAEVQADLDGHGVSVVSHEEINIYQSTKSLRIAGEGFKDGV------------KNVGSL-----------------------PGPLVLLAANVGDGWVPLGPTVAKAGRKVATVYEDPSVLPNDIEIFRTHSHALMIKGTGFNKLTRPIIDFEPQLD 402
LL+R++ GGV +AE+QADL+ H +SV +HEE+ +YQS+K L IAG+GF G KN + P PL+LLAA+ GDG+VPLG T+AK GRKVAT+YEDP + P+ EI RT +H + GTGF K RPII FEP D
Sbjct: 147 LLLREDLGGVTIAEMQADLNRHSLSVETHEEVTMYQSSKVLTIAGQGFNTGNTRFRFGNGLLEGKNFTQIVTPESATFTLEEGSKWRQDAPAWPAPLILLAADAGDGFVPLGATIAKTGRKVATIYEDPRLEPSLQEIGRTLTHDFYLGGTGFTKAFRPIIAFEPLAD 314
BLAST of mRNA_H-elongata_contig143143.2978.1 vs. uniprot
Match: D7FRJ9_ECTSI (Trypsin domain protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRJ9_ECTSI) HSP 1 Score: 134 bits (336), Expect = 1.230e-33 Identity = 78/168 (46.43%), Postives = 102/168 (60.71%), Query Frame = 1
Query: 7 LLIRQE-GGVIVAEVQADLDGHGVSVVSHEEINIYQSTKSLRIAGEGF--------------------------------KDGVK---NVGSLPGPLVLLAANVGDGWVPLGPTVAKAGRKVATVYEDPSVLPNDIEIFRTHSHALMIKGTGFNKLTRPIIDFEPQLD 402
LL+R++ GGV +AE+QAD+ GH +SV +HEE+ +YQS+K L IAG+GF ++G K + S P PLVLLAA+ GDG+VPLG T AKAGRKVAT++EDP + P+ EI RT +H L ++GTGF K PII FEP D
Sbjct: 147 LLLREDLGGVTIAEMQADMKGHSLSVETHEEVTMYQSSKVLTIAGQGFNSSYTRFRFANSLVEGKNFTQVVTPESATFALEEGSKWRQDAPSWPAPLVLLAADAGDGFVPLGATTAKAGRKVATIFEDPRLEPSLQEIGRTLTHELYLRGTGFTKAFPPIIAFEPLAD 314
BLAST of mRNA_H-elongata_contig143143.2978.1 vs. uniprot
Match: A0A835YLV2_9STRA (Peptidase S1 and S6, chymotrypsin/Hap n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLV2_9STRA) HSP 1 Score: 127 bits (318), Expect = 3.320e-31 Identity = 74/158 (46.84%), Postives = 91/158 (57.59%), Query Frame = 1
Query: 28 GVIVAEVQADLDGHGVSVVSHEEINIYQSTKSLRIAGEGFK-DGVK------------------------------------NVGSLPGPLVLLAANVGDGWVPLGPTVAKAGRKVATVYEDPSVLPNDIEIFRTHSHALMIKGTGFNKLTRPIIDFE 390
G I+AEVQAD +GHGV+V +H E +IYQST +L I G GF DG + NV +LPG LVLLAA+ G G+V LG T K+GRKVATVYEDPSV +++EIFRTH+H L I+G GFN P+ FE
Sbjct: 210 GRIIAEVQADREGHGVTVETHVEKHIYQSTPTLEIDGVGFNPDGTQLRFANGLRGGGANYTASTVTPTRMTLDLAPGSKWRGNVDNLPGALVLLAADAGAGFVALGATAVKSGRKVATVYEDPSVKASEVEIFRTHTHTLSIQGAGFNDEFSPVFKFE 367
BLAST of mRNA_H-elongata_contig143143.2978.1 vs. uniprot
Match: A0A7S2SQB8_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SQB8_9STRA) HSP 1 Score: 123 bits (308), Expect = 7.330e-30 Identity = 74/167 (44.31%), Postives = 94/167 (56.29%), Query Frame = 1
Query: 25 GGVIVAEVQADLDGHGVSVVSHEEINIYQSTKSLRIAGEGFK---------DGVKNVG----------------------------SLPGPLVLLAANVGDGWVPLGPTVAKAGRKVATVYEDPSVLPNDIEIFRTHSHALMIKGTGFNKLT-RPIIDFEPQLDSAQ 411
GGV VAEVQADL HGV+V S E IYQS+ L I G+GF +G++ G +LPGPLVLLA + G G+VP+GPT AK GR VATV+EDP+V N IF+THSH L IKGTGF + T ++ F+P L++ +
Sbjct: 214 GGVTVAEVQADLGAHGVTVQSSPEQKIYQSSSELTIRGDGFNSTSNVLRFNNGLRGKGINYTAIEHTSTLMKLNLDGKSKWRANPTNLPGPLVLLAVDAGAGFVPIGPTEAKKGRTVATVFEDPTVTKNLKVIFQTHSHELYIKGTGFTRGTYNTVVTFDPPLENGE 380
BLAST of mRNA_H-elongata_contig143143.2978.1 vs. uniprot
Match: A0A7S3XT65_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XT65_HETAK) HSP 1 Score: 123 bits (308), Expect = 7.390e-30 Identity = 73/167 (43.71%), Postives = 91/167 (54.49%), Query Frame = 1
Query: 28 GVIVAEVQADLDGHGVSVVSHEEINIYQSTKSLRIAGEGFKD----------------------------------GVK---NVGSLPGPLVLLAANVGDGWVPLGPTVAKAGRKVATVYEDPSVLPNDIEIFRTHSHALMIKGTGFNKLTRPIIDFEPQLDSAQVY 417
GV VAEVQADLDGHG+ VV+++E IYQST ++ I G GF GVK NV LPGPL +LAA+ G GWV LG T AK GR +ATVYEDP++ P D E+++THSH L + G GF RP++ P L + Y
Sbjct: 249 GVRVAEVQADLDGHGIEVVTNKEA-IYQSTPTVMITGSGFNPEGTKLRFYNNLRGSGANYTTIAATPNSLTLQLNPGVKWRENVRQLPGPLTVLAADGGAGWVALGATAAKRGRTIATVYEDPAITPQDTELWQTHSHHLTVTGKGFVMGQRPLLTTTPPLTYGEQY 414
BLAST of mRNA_H-elongata_contig143143.2978.1 vs. uniprot
Match: A0A7S3XT52_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XT52_HETAK) HSP 1 Score: 123 bits (308), Expect = 7.450e-30 Identity = 73/167 (43.71%), Postives = 91/167 (54.49%), Query Frame = 1
Query: 28 GVIVAEVQADLDGHGVSVVSHEEINIYQSTKSLRIAGEGFKD----------------------------------GVK---NVGSLPGPLVLLAANVGDGWVPLGPTVAKAGRKVATVYEDPSVLPNDIEIFRTHSHALMIKGTGFNKLTRPIIDFEPQLDSAQVY 417
GV VAEVQADLDGHG+ VV+++E IYQST ++ I G GF GVK NV LPGPL +LAA+ G GWV LG T AK GR +ATVYEDP++ P D E+++THSH L + G GF RP++ P L + Y
Sbjct: 249 GVRVAEVQADLDGHGIEVVTNKEA-IYQSTPTVMITGSGFNPEGTKLRFYNNLRGSGANYTTIAATPNSLTLQLNPGVKWRENVRQLPGPLTVLAADGGAGWVALGATAAKRGRTIATVYEDPAITPQDTELWQTHSHHLTVTGKGFVMGQRPLLTTTPPLTYGEQY 414
BLAST of mRNA_H-elongata_contig143143.2978.1 vs. uniprot
Match: A0A7S2BT53_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BT53_9STRA) HSP 1 Score: 112 bits (281), Expect = 3.170e-26 Identity = 69/170 (40.59%), Postives = 90/170 (52.94%), Query Frame = 1
Query: 25 GGVIVAEVQADLDGHGVSVVSHEEINIYQSTKSLRIAGEGFKD--------------GVK-----------------------NVGSLPGPLVLLAANVGDGWVPLGPTVAKAGRKVATVYEDPSVLPNDIEIFRTHSHALMIKGTGFNKLTR--PIIDFEPQLDSAQVY 417
GG++VAEVQADL HGV+V S + YQS SL I GEGF + GV N +LPGPLVLLA + G G+VP+GPT AK GR VAT++EDP+V N I+RTH+H + + G+GF K + I +P L+ + Y
Sbjct: 214 GGIVVAEVQADLGAHGVTVESTPDEKFYQSQGSLIIIGEGFNETKNTLRFANGLRGKGVNYTTVEHSKTQIKLDLAKKSRWRANPANLPGPLVLLAVDAGAGFVPVGPTEAKKGRTVATIFEDPAVNKNMKTIYRTHTHQIWVTGSGFTKAPQYSTTITMDPPLEVGEDY 383
BLAST of mRNA_H-elongata_contig143143.2978.1 vs. uniprot
Match: A0A7S2C5N5_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2C5N5_9STRA) HSP 1 Score: 102 bits (255), Expect = 1.010e-22 Identity = 64/164 (39.02%), Postives = 86/164 (52.44%), Query Frame = 1
Query: 25 GGVIVAEVQADLDGHGVSVVSHEEINIYQSTKSLRIAGEGFK---------DGVKNVG----------------------------SLPGPLVLLAANVGDGWVPLGPTVAKAGRKVATVYEDPSVLPNDIEIFRTHSHALMIKGTGFNKLTR-PIIDFEPQLD 402
GG+ +AEVQA+L HGV+V + YQ+T SL I G GF +G++ G +LPGPLVLLA + G G+VP+GPT AK GR VAT++E PSV + +++THSH L I GTGF + T F P++D
Sbjct: 214 GGITIAEVQANLGAHGVTVETTANERFYQNTGSLVILGNGFNTSHNTLRFANGLRGKGVNYTTVEHTDTQLRLTLASKSKWRANPANLPGPLVLLAVDAGAGFVPVGPTEAKKGRIVATIFETPSVKKSGKTLYKTHSHQLWIVGTGFTRGTYYSKFTFSPEMD 377 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig143143.2978.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 18
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig143143.2978.1 >prot_H-elongata_contig143143.2978.1 ID=prot_H-elongata_contig143143.2978.1|Name=mRNA_H-elongata_contig143143.2978.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=140bp IFLLIRQEGGVIVAEVQADLDGHGVSVVSHEEINIYQSTKSLRIAGEGFKback to top mRNA from alignment at H-elongata_contig143143:145..1261+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig143143.2978.1 ID=mRNA_H-elongata_contig143143.2978.1|Name=mRNA_H-elongata_contig143143.2978.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1117bp|location=Sequence derived from alignment at H-elongata_contig143143:145..1261+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig143143:145..1261+ >mRNA_H-elongata_contig143143.2978.1 ID=mRNA_H-elongata_contig143143.2978.1|Name=mRNA_H-elongata_contig143143.2978.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=840bp|location=Sequence derived from alignment at H-elongata_contig143143:145..1261+ (Himanthalia elongata Himel1 dioecious)back to top |