prot_H-elongata_contig142907.2967.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig142907.2967.1
Unique Nameprot_H-elongata_contig142907.2967.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length72
Homology
BLAST of mRNA_H-elongata_contig142907.2967.1 vs. uniprot
Match: A0A6H5KWE6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWE6_9PHAE)

HSP 1 Score: 117 bits (293), Expect = 8.650e-30
Identity = 61/70 (87.14%), Postives = 67/70 (95.71%), Query Frame = 0
Query:    2 KRERLAVSSKVLELATKLLKELDGPNKLSGLSMNPLLYNVTRAVLVSALSGVMSDTLGFSVKLYKVLSYK 71
            KRERL VS+ VL+LATKLLKELDGPNKLSGLSMNP+LYNVTR VLVSALSGVMSDTLGFSVKL+KV+S+K
Sbjct:  332 KRERLGVSTNVLKLATKLLKELDGPNKLSGLSMNPVLYNVTRVVLVSALSGVMSDTLGFSVKLWKVISFK 401          
BLAST of mRNA_H-elongata_contig142907.2967.1 vs. uniprot
Match: D8LCF4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCF4_ECTSI)

HSP 1 Score: 117 bits (293), Expect = 5.180e-29
Identity = 61/70 (87.14%), Postives = 67/70 (95.71%), Query Frame = 0
Query:    2 KRERLAVSSKVLELATKLLKELDGPNKLSGLSMNPLLYNVTRAVLVSALSGVMSDTLGFSVKLYKVLSYK 71
            KRERL VS+ VL+LATKLLKELDGPNKLSGLSMNP+LYNVTR VLVSALSGVMSDTLGFSVKL+KV+S+K
Sbjct:  721 KRERLGVSTNVLKLATKLLKELDGPNKLSGLSMNPVLYNVTRVVLVSALSGVMSDTLGFSVKLWKVISFK 790          
BLAST of mRNA_H-elongata_contig142907.2967.1 vs. uniprot
Match: A0A1A6GXP7_NEOLE (Uncharacterized protein n=4 Tax=Amniota TaxID=32524 RepID=A0A1A6GXP7_NEOLE)

HSP 1 Score: 85.9 bits (211), Expect = 1.390e-20
Identity = 42/69 (60.87%), Postives = 59/69 (85.51%), Query Frame = 0
Query:    1 SKRERLAVSSKVLELATKLLKELDGPNKLSGLSMNPLLYNVTRAVLVSALSGVMSDTLGFSVKLYKVLS 69
            +K+E L + + VL+LATKLLKELD P +L GL+MNPLLYN+T+ V++SA+SGV+SD LGF++KL+K+ S
Sbjct:    6 NKKEELTLVNNVLKLATKLLKELDSPFRLYGLTMNPLLYNITQVVILSAVSGVISDLLGFNLKLWKIKS 74          
BLAST of mRNA_H-elongata_contig142907.2967.1 vs. uniprot
Match: A0A6P6JZT7_CARAU (putative homeodomain transcription factor 2 n=2 Tax=Cyprininae TaxID=2743694 RepID=A0A6P6JZT7_CARAU)

HSP 1 Score: 85.9 bits (211), Expect = 1.390e-20
Identity = 42/69 (60.87%), Postives = 59/69 (85.51%), Query Frame = 0
Query:    1 SKRERLAVSSKVLELATKLLKELDGPNKLSGLSMNPLLYNVTRAVLVSALSGVMSDTLGFSVKLYKVLS 69
            +K+E L + + VL+LATKLLKELD P +L GL+MNPLLYN+T+ V++SA+SGV+SD LGF++KL+K+ S
Sbjct:    6 NKKEELTLVNNVLKLATKLLKELDAPFRLYGLTMNPLLYNITQVVILSAVSGVISDLLGFNLKLWKIKS 74          
BLAST of mRNA_H-elongata_contig142907.2967.1 vs. uniprot
Match: A0A061ADE4_ONCMY (Uncharacterized protein (Fragment) n=1 Tax=Oncorhynchus mykiss TaxID=8022 RepID=A0A061ADE4_ONCMY)

HSP 1 Score: 85.1 bits (209), Expect = 5.090e-20
Identity = 42/69 (60.87%), Postives = 59/69 (85.51%), Query Frame = 0
Query:    1 SKRERLAVSSKVLELATKLLKELDGPNKLSGLSMNPLLYNVTRAVLVSALSGVMSDTLGFSVKLYKVLS 69
            +K+E L + + VL+LATKLLKELD P +L GL+MNPLLYN+T+ V++SA+SGV+SD LGF++KL+K+ S
Sbjct:   28 NKKEDLTLVNNVLKLATKLLKELDAPFRLYGLTMNPLLYNITQVVILSAVSGVISDLLGFNLKLWKIKS 96          
BLAST of mRNA_H-elongata_contig142907.2967.1 vs. uniprot
Match: UPI00077AD11E (putative homeodomain transcription factor 2 isoform X1 n=1 Tax=Acropora digitifera TaxID=70779 RepID=UPI00077AD11E)

HSP 1 Score: 84.3 bits (207), Expect = 5.660e-20
Identity = 40/66 (60.61%), Postives = 56/66 (84.85%), Query Frame = 0
Query:    2 KRERLAVSSKVLELATKLLKELDGPNKLSGLSMNPLLYNVTRAVLVSALSGVMSDTLGFSVKLYKV 67
            K+E L +++ VL+LA+KLLKE++ P K+SGLSMNPLLYN+TR V++S  SGVMSD LGF +K++K+
Sbjct:    7 KKEDLTIANHVLKLASKLLKEIESPFKMSGLSMNPLLYNITRVVVLSLFSGVMSDLLGFRLKIWKI 72          
BLAST of mRNA_H-elongata_contig142907.2967.1 vs. uniprot
Match: A0A1S3QH78_SALSA (putative homeodomain transcription factor 2 n=23 Tax=Salmoninae TaxID=504568 RepID=A0A1S3QH78_SALSA)

HSP 1 Score: 84.0 bits (206), Expect = 8.040e-20
Identity = 41/69 (59.42%), Postives = 59/69 (85.51%), Query Frame = 0
Query:    1 SKRERLAVSSKVLELATKLLKELDGPNKLSGLSMNPLLYNVTRAVLVSALSGVMSDTLGFSVKLYKVLS 69
            +K++ L + + VL+LATKLLKELD P +L GL+MNPLLYN+T+ V++SA+SGV+SD LGF++KL+K+ S
Sbjct:    6 NKKDDLTLVNNVLKLATKLLKELDAPFRLYGLTMNPLLYNITQVVILSAVSGVISDLLGFNLKLWKIKS 74          
BLAST of mRNA_H-elongata_contig142907.2967.1 vs. uniprot
Match: UPI001955E1D8 (protein PHTF2-like n=1 Tax=Pimephales promelas TaxID=90988 RepID=UPI001955E1D8)

HSP 1 Score: 85.9 bits (211), Expect = 8.560e-20
Identity = 42/69 (60.87%), Postives = 59/69 (85.51%), Query Frame = 0
Query:    1 SKRERLAVSSKVLELATKLLKELDGPNKLSGLSMNPLLYNVTRAVLVSALSGVMSDTLGFSVKLYKVLS 69
            +K+E L + + VL+LATKLLKELD P +L GL+MNPLLYN+T+ V++SA+SGV+SD LGF++KL+K+ S
Sbjct:   74 NKKEELTLVNNVLKLATKLLKELDAPFRLYGLTMNPLLYNITQVVILSAVSGVISDMLGFNLKLWKIKS 142          
BLAST of mRNA_H-elongata_contig142907.2967.1 vs. uniprot
Match: A0A7S2R9Z1_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2R9Z1_9STRA)

HSP 1 Score: 89.7 bits (221), Expect = 2.800e-19
Identity = 43/69 (62.32%), Postives = 58/69 (84.06%), Query Frame = 0
Query:    2 KRERLAVSSKVLELATKLLKELDGPNKLSGLSMNPLLYNVTRAVLVSALSGVMSDTLGFSVKLYKVLSY 70
            KRERLA+SSKVLELA KLLKE + PN++SGL+M+P++YNVTR +L SALS  MS+ +GF VK++K+  +
Sbjct:  665 KRERLAISSKVLELAIKLLKEFESPNQISGLAMDPVVYNVTRVILFSALSAAMSELMGFDVKMWKLKGF 733          
BLAST of mRNA_H-elongata_contig142907.2967.1 vs. uniprot
Match: A0A822GPI3_9NEOB ((mimic poison frog) hypothetical protein n=1 Tax=Ranitomeya imitator TaxID=111125 RepID=A0A822GPI3_9NEOB)

HSP 1 Score: 85.9 bits (211), Expect = 3.460e-19
Identity = 42/69 (60.87%), Postives = 59/69 (85.51%), Query Frame = 0
Query:    1 SKRERLAVSSKVLELATKLLKELDGPNKLSGLSMNPLLYNVTRAVLVSALSGVMSDTLGFSVKLYKVLS 69
            +K+E L + + VL+LATKLLKELD P +L GL+MNPLLYN+T+ V++SA+SGV+SD LGF++KL+K+ S
Sbjct:  134 NKKEELTLVNNVLKLATKLLKELDSPFRLYGLTMNPLLYNITQVVILSAVSGVISDLLGFNLKLWKIKS 202          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig142907.2967.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KWE6_9PHAE8.650e-3087.14Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LCF4_ECTSI5.180e-2987.14Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A1A6GXP7_NEOLE1.390e-2060.87Uncharacterized protein n=4 Tax=Amniota TaxID=3252... [more]
A0A6P6JZT7_CARAU1.390e-2060.87putative homeodomain transcription factor 2 n=2 Ta... [more]
A0A061ADE4_ONCMY5.090e-2060.87Uncharacterized protein (Fragment) n=1 Tax=Oncorhy... [more]
UPI00077AD11E5.660e-2060.61putative homeodomain transcription factor 2 isofor... [more]
A0A1S3QH78_SALSA8.040e-2059.42putative homeodomain transcription factor 2 n=23 T... [more]
UPI001955E1D88.560e-2060.87protein PHTF2-like n=1 Tax=Pimephales promelas Tax... [more]
A0A7S2R9Z1_9STRA2.800e-1962.32Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A822GPI3_9NEOB3.460e-1960.87(mimic poison frog) hypothetical protein n=1 Tax=R... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR039775Putative homeodomain transcription factor 1/2PANTHERPTHR12680PUTATIVE HOMEODOMAIN TRANSCRIPTION FACTOR PHTFcoord: 2..67
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 66..71
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 44..65
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..43

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig142907contigH-elongata_contig142907:987..1202 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig142907.2967.1mRNA_H-elongata_contig142907.2967.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig142907 987..1202 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig142907.2967.1 ID=prot_H-elongata_contig142907.2967.1|Name=mRNA_H-elongata_contig142907.2967.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=72bp
SKRERLAVSSKVLELATKLLKELDGPNKLSGLSMNPLLYNVTRAVLVSAL
SGVMSDTLGFSVKLYKVLSYK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039775PHTF1/2