mRNA_H-elongata_contig142844.2964.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig142844.2964.1 vs. uniprot
Match: D8LTB4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTB4_ECTSI) HSP 1 Score: 162 bits (410), Expect = 3.520e-47 Identity = 69/84 (82.14%), Postives = 77/84 (91.67%), Query Frame = 1
Query: 1 EDLRIEGHWRVNGSHYSRTSEAWLKRMDTQKEEILPVLAKIYGEGNKMKWFVYWRLFFIACAELFGYRNGEEWMVAHYLFAKPE 252
EDLRIEGHWRVNG+HY+RTSEAWL RMD KEEI+P+L +IYGEG ++KWFVYWRLFFIACAELF YR GEEWMV+HYLFAKPE
Sbjct: 275 EDLRIEGHWRVNGTHYARTSEAWLSRMDENKEEIMPILGEIYGEGTELKWFVYWRLFFIACAELFNYRKGEEWMVSHYLFAKPE 358
BLAST of mRNA_H-elongata_contig142844.2964.1 vs. uniprot
Match: A0A835YH28_9STRA (S-adenosyl-L-methionine-dependent methyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YH28_9STRA) HSP 1 Score: 146 bits (369), Expect = 4.590e-41 Identity = 61/83 (73.49%), Postives = 73/83 (87.95%), Query Frame = 1
Query: 1 EDLRIEGHWRVNGSHYSRTSEAWLKRMDTQKEEILPVLAKIYGEGNKMKWFVYWRLFFIACAELFGYRNGEEWMVAHYLFAKP 249
+DLRIEGHWRVNG+HY+RTSEAWL++MD K +LP+LA IYG G++ KWFVYWRLFFIACAELF Y NG++WMV+HYLF KP
Sbjct: 276 DDLRIEGHWRVNGTHYARTSEAWLRQMDDNKAALLPLLADIYGAGSETKWFVYWRLFFIACAELFNYENGQQWMVSHYLFNKP 358
BLAST of mRNA_H-elongata_contig142844.2964.1 vs. uniprot
Match: A0A7S2FL41_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2FL41_9STRA) HSP 1 Score: 128 bits (321), Expect = 1.360e-35 Identity = 51/81 (62.96%), Postives = 66/81 (81.48%), Query Frame = 1
Query: 4 DLRIEGHWRVNGSHYSRTSEAWLKRMDTQKEEILPVLAKIYGEGNKMKWFVYWRLFFIACAELFGYRNGEEWMVAHYLFAK 246
+L I+ HWRV+G HY +TSEAWLKR+D K +LPVLAK YG+G ++KWF+ WRLF++ACAELFG+R G EW+V+HY F K
Sbjct: 112 NLTIDAHWRVSGEHYQKTSEAWLKRLDAHKTALLPVLAKTYGQGEELKWFMNWRLFYLACAELFGFRGGNEWVVSHYRFVK 192
BLAST of mRNA_H-elongata_contig142844.2964.1 vs. uniprot
Match: UPI0014120AE8 (cyclopropane-fatty-acyl-phospholipid synthase family protein n=1 Tax=Emticicia sp. CRIBPO TaxID=2683258 RepID=UPI0014120AE8) HSP 1 Score: 131 bits (330), Expect = 2.040e-35 Identity = 53/82 (64.63%), Postives = 69/82 (84.15%), Query Frame = 1
Query: 1 EDLRIEGHWRVNGSHYSRTSEAWLKRMDTQKEEILPVLAKIYGEGNKMKWFVYWRLFFIACAELFGYRNGEEWMVAHYLFAK 246
EDL IE HW+++G+HY+RTSEAWLK MD K+EI+P+ A YG GN KW+VYWR+F+++CAEL+ YRNGEEW+V+HYLF K
Sbjct: 260 EDLSIENHWQLDGTHYARTSEAWLKNMDQHKKEIMPLFAATYGAGNATKWWVYWRIFYMSCAELWNYRNGEEWIVSHYLFNK 341
BLAST of mRNA_H-elongata_contig142844.2964.1 vs. uniprot
Match: A0A7W1UN70_9BACT (Class I SAM-dependent methyltransferase n=1 Tax=Bacteroidetes bacterium TaxID=1898104 RepID=A0A7W1UN70_9BACT) HSP 1 Score: 127 bits (318), Expect = 2.630e-35 Identity = 51/82 (62.20%), Postives = 66/82 (80.49%), Query Frame = 1
Query: 1 EDLRIEGHWRVNGSHYSRTSEAWLKRMDTQKEEILPVLAKIYGEGNKMKWFVYWRLFFIACAELFGYRNGEEWMVAHYLFAK 246
E L IE HW VNG HYS+TSEAWL+ MD K EI+P+ + YG+ + +KW+VYWR+F++ACAEL+GY NGEEW+V+HYLF K
Sbjct: 99 EHLSIEQHWHVNGMHYSKTSEAWLRNMDKHKSEIMPLFEETYGKDHAVKWWVYWRIFYLACAELWGYNNGEEWIVSHYLFTK 180
BLAST of mRNA_H-elongata_contig142844.2964.1 vs. uniprot
Match: A0A7Y4XTA1_9BACT (Class I SAM-dependent methyltransferase n=1 Tax=Cyclobacteriaceae bacterium TaxID=2099675 RepID=A0A7Y4XTA1_9BACT) HSP 1 Score: 130 bits (328), Expect = 6.870e-35 Identity = 54/80 (67.50%), Postives = 65/80 (81.25%), Query Frame = 1
Query: 7 LRIEGHWRVNGSHYSRTSEAWLKRMDTQKEEILPVLAKIYGEGNKMKWFVYWRLFFIACAELFGYRNGEEWMVAHYLFAK 246
+IE HWRVNG HYS+TSEAWL +MD KE I+P+ K YGE +KW+VYWR+FF+ACAELFGY+NG EWMV+HYLF K
Sbjct: 262 FKIEKHWRVNGMHYSKTSEAWLTKMDEHKELIMPLFEKTYGENQAVKWWVYWRVFFMACAELFGYKNGTEWMVSHYLFEK 341
BLAST of mRNA_H-elongata_contig142844.2964.1 vs. uniprot
Match: UPI00131B35F3 (cyclopropane-fatty-acyl-phospholipid synthase family protein n=1 Tax=Pedobacter sp. L105 TaxID=1641871 RepID=UPI00131B35F3) HSP 1 Score: 130 bits (326), Expect = 8.160e-35 Identity = 55/82 (67.07%), Postives = 64/82 (78.05%), Query Frame = 1
Query: 1 EDLRIEGHWRVNGSHYSRTSEAWLKRMDTQKEEILPVLAKIYGEGNKMKWFVYWRLFFIACAELFGYRNGEEWMVAHYLFAK 246
+DL IE W VNG HYS+TSEAWL MD K+EI+P+ K YG+ +KW+VYWRLF+IACAELFGYRNG EWMV HYLF K
Sbjct: 260 DDLTIENLWVVNGMHYSKTSEAWLSNMDRHKKEIMPIFEKTYGKDQALKWWVYWRLFYIACAELFGYRNGNEWMVCHYLFKK 341
BLAST of mRNA_H-elongata_contig142844.2964.1 vs. uniprot
Match: A0A2R7L4U2_9SPHI (SAM-dependent methyltransferase n=1 Tax=Pedobacter sp. HMWF019 TaxID=2056856 RepID=A0A2R7L4U2_9SPHI) HSP 1 Score: 129 bits (325), Expect = 1.170e-34 Identity = 50/82 (60.98%), Postives = 68/82 (82.93%), Query Frame = 1
Query: 1 EDLRIEGHWRVNGSHYSRTSEAWLKRMDTQKEEILPVLAKIYGEGNKMKWFVYWRLFFIACAELFGYRNGEEWMVAHYLFAK 246
EDL+++ HW VNG+HY++T+EAWL +MDT K EI+P+ + YG+ +KW+VYWRLF+++CAELFGY+NG EWMV HYLF K
Sbjct: 260 EDLKVQKHWIVNGTHYAKTAEAWLSKMDTHKTEIIPIFEQTYGKDQTLKWWVYWRLFYMSCAELFGYKNGNEWMVCHYLFYK 341
BLAST of mRNA_H-elongata_contig142844.2964.1 vs. uniprot
Match: A0A520C6J3_9SPHI (SAM-dependent methyltransferase (Fragment) n=1 Tax=Pedobacter sp. TaxID=1411316 RepID=A0A520C6J3_9SPHI) HSP 1 Score: 122 bits (307), Expect = 1.550e-34 Identity = 50/82 (60.98%), Postives = 63/82 (76.83%), Query Frame = 1
Query: 1 EDLRIEGHWRVNGSHYSRTSEAWLKRMDTQKEEILPVLAKIYGEGNKMKWFVYWRLFFIACAELFGYRNGEEWMVAHYLFAK 246
+DL+IE HW VNG++Y +TSEAWL MD K+EI+P+L YG+ +KW+VYWRLF++ACAELF Y G EWMV HYLF K
Sbjct: 28 DDLKIEKHWVVNGTNYGKTSEAWLSNMDKHKKEIMPILENTYGKDQAVKWWVYWRLFYMACAELFNYNKGNEWMVCHYLFEK 109
BLAST of mRNA_H-elongata_contig142844.2964.1 vs. uniprot
Match: A0A2P2E507_9LEPT (Cyclopropane-fatty-acyl-phospholipid synthase n=1 Tax=Leptospira ryugenii TaxID=1917863 RepID=A0A2P2E507_9LEPT) HSP 1 Score: 128 bits (322), Expect = 3.130e-34 Identity = 51/81 (62.96%), Postives = 66/81 (81.48%), Query Frame = 1
Query: 4 DLRIEGHWRVNGSHYSRTSEAWLKRMDTQKEEILPVLAKIYGEGNKMKWFVYWRLFFIACAELFGYRNGEEWMVAHYLFAK 246
D IE HWRVNG+HY++TSEAW + + K++I+P+LAK YGE K KWFVYW++FF+ACAEL+GY+ GEEW V+HYLF K
Sbjct: 261 DFLIEDHWRVNGTHYAKTSEAWYENLLANKDKIMPILAKTYGESEKTKWFVYWKVFFLACAELWGYKQGEEWFVSHYLFRK 341 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig142844.2964.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig142844.2964.1 >prot_H-elongata_contig142844.2964.1 ID=prot_H-elongata_contig142844.2964.1|Name=mRNA_H-elongata_contig142844.2964.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=85bp EDLRIEGHWRVNGSHYSRTSEAWLKRMDTQKEEILPVLAKIYGEGNKMKWback to top mRNA from alignment at H-elongata_contig142844:1..635+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig142844.2964.1 ID=mRNA_H-elongata_contig142844.2964.1|Name=mRNA_H-elongata_contig142844.2964.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=635bp|location=Sequence derived from alignment at H-elongata_contig142844:1..635+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig142844:1..635+ >mRNA_H-elongata_contig142844.2964.1 ID=mRNA_H-elongata_contig142844.2964.1|Name=mRNA_H-elongata_contig142844.2964.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=510bp|location=Sequence derived from alignment at H-elongata_contig142844:1..635+ (Himanthalia elongata Himel1 dioecious)back to top |