mRNA_H-elongata_contig14281.2961.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig14281.2961.1
Unique NamemRNA_H-elongata_contig14281.2961.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig14281.2961.1 vs. uniprot
Match: D7G2Z8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2Z8_ECTSI)

HSP 1 Score: 536 bits (1382), Expect = 3.620e-169
Identity = 293/579 (50.60%), Postives = 376/579 (64.94%), Query Frame = 1
Query:  376 VNSVNGIDAIVNTKFRGNTAQMGGALGLSGTVEMTNCSFLENESDFNGGPAIYVMIGSVSKMDKCSFSENVFNCENGTYFSYNGEGNIDDIICNGCTCEGCILCNTCHYGEDKNIPTCEPAKEHSESYGGTI--EDLVIDEGYWRPTNDSTDILECYYAKACNGGVTGADEYCAQGYEGAYCSVCSENYGPGLGNTCSKCSGSTGGIVLAVFLGTLGTAMGVILALHLVSGAEGGRGHNLVYLAMRIIPMHTLKIIIVCWQILTQFSDVAYVTYPELYQRFLDVVDVVNFDLSWAVAVECIVDVDFHSTLLVSTLAPLFILGFLAFTYYVAVRRHRHRSAVALRSIWQKHLSVVLFLTFLVYSSVSSVIFQMFNCEKLDDSKNYLRADYSIECDSTKHRVMMVYSACMMLLYPVGIPALYAYLLFHKRAILA-DGARRETDESVQLTMDLWKPYRPARFYYEVIECGRRLLLTGGVLLVEDDTSAQVAAILMVAVSFAILLEILAPYESRIDIWVSRTGHAVVYGSMYFALLQKTEISNDTQASQKVFEWVLLTTQVLMVAVVAINAAVLAYSSVVEKR 2103
            V++  G D  VN+ F GNTA  GGAL L+GT E+ NCSF+EN SD  GG A+   IG VS +   SFS NV+ C+ G +      G + + IC+GC  E    C  C + E + +P C  A EHS S GGT+  + LVI+ GYWR T  S ++LECY A AC GGVTG++ YC +GYEG YC+VCS  Y   LG  CSKCS   G I L V +   G    V L  + VSG   GR   +V    R +P+ ++KI+IV WQILTQF+ VA + +P +YQRFLD +++ NFDL W ++  C+ DVDFH  LLVST+AP+  L FLA   Y A  R+ HRS+  L+ +W KH+S+VL LTFLVY+SVS+V+FQ F CE+LDD KNYLRADY IECDS KH    VY+  M++LY VGIPALY   LF    +L  D A RE    +  T DLWKPYRP+ FYYEVIEC RR+LL G V+ +  +T+AQ+A  L++AV FA++ E LAPY SR D W+ R GHAVV  SMY ALL K ++S++  +SQ+VFE +L+   V MV VV +   + A S  VEKR
Sbjct:  390 VDTAAGQDKFVNSVFEGNTAGTGGALRLAGTAEVNNCSFVENVSDDGGGAAVS-NIGFVSSVSNLSFSRNVYGCQEGMFLECEESGTLYEAICDGCPVE----CEGCSFEEPQLVPKCSDALEHSNSSGGTVTLDALVIEPGYWRATPSSENVLECYNADACLGGVTGSESYCLEGYEGPYCAVCSGGYTARLGMACSKCSDRAGSIALGVSVSVAGLLFTVALVSYAVSGESEGRARGVVERTGRFVPLQSVKIVIVAWQILTQFTSVANIRFPHVYQRFLDALELFNFDLGWVLSAGCVFDVDFHDRLLVSTIAPIVGLLFLA-AVYAAAARNSHRSSEDLQRVWHKHVSLVLLLTFLVYASVSAVLFQTFACEELDDRKNYLRADYRIECDSPKHSAFQVYAGFMIVLYTVGIPALYGGFLFRDSDVLRRDEADREQLARIAPTADLWKPYRPSVFYYEVIECARRVLLAGVVVFIYPNTAAQIAVALLIAVVFAMISEALAPYASRWDTWLCRMGHAVVAVSMYVALLLKVDVSDERASSQRVFESLLVAAHVCMVGVVLLEVIMEAISLWVEKR 962          
BLAST of mRNA_H-elongata_contig14281.2961.1 vs. uniprot
Match: D7G301_ECTSI (Polymorphic Outer membrane protein G/I family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G301_ECTSI)

HSP 1 Score: 512 bits (1318), Expect = 1.940e-157
Identity = 304/718 (42.34%), Postives = 416/718 (57.94%), Query Frame = 1
Query:    7 RASTLTWSGETNFTSNKAGLHGGAVGSEDVDRIMAVSTDSTIASGERSSIDISXXXXXXXXXXXXXXGGMALLA-TDDGPKLDGVKFVLNSATSDGGGVYATAS-------------KVTXXXXXXXXXXXXXXXXXVNSVNGIDAIVNTKFRGNTAQMGGALGLSGTVEMTNCSFLENESDFNGGPAIYVMIGSVSKMDKCSFSENVFNCENGTYFSYNGEGNIDDIICNGC--TCEGCILCNTCHYGEDKNIPTCEPAKEHSESYGGTI--EDLVIDEGYWRPTNDSTDILECYYAKACNGGVTGADEYCAQGYEGAYCSVCSENYGPGLGNTCSKCSGSTGGIVLAVFLGTLGTAMGVILALHLVSGAEGGRGHNLVYLAMRIIPMHTLKIIIVCWQILTQFSDVAYVTYPELYQRFLDVVDVVNFDLSWAVAVECIVDVDFHSTLLVSTLAPLFILGFLAFTYYVAVRRHRHRSAVALRSIWQKHLSVVLFLTFLVYSSVSSVIFQMFNCEKLDDSKNYLRADYSIECDSTKHRVMMVYSACMMLLYPVGIPALYAYLLFHKRAILADG-ARRETDESVQLTMDLWKPYRPARFYYEVIECGRRLLLTGGVLLVEDDTSAQVAAILMVAVSFAILLEILAPYESRIDIWVSRTGHAVVYGSMYFALLQKTEISNDTQASQKVFEWVLLTTQVLMVAVVAINAAVLAYSSVVEKR 2103
            + STL  +G T F +N  G +GGA+                +  G   +++I               GG   ++ T  GP   G +F+ NSA   GG V    S               T                 ++S  G DA VN+ F+GN A  GG L L+GT  +  CSF++N SD  GG A+   IGS+  ++  +FS NVF+C+ G Y  YN  GN  +  C GC   C+GC         E    PTC    EH  S GGT+  EDL ++ GYWR +  S ++  CY + AC GGVTG   YC +GYEG YC+VCS+ Y   L   C++CSG  G I LA  L  +   +   +A + +SG  G     +V    + IP+ ++KI+IV WQILTQF+ VA VTYP++Y+RFLD +DV NFDLSW ++  CI D+DFH  LL ST++P+  L FLA TY  AV  +R + A +L+ IW KH+S+VL LTFL+YSSVS+ +F+ F CE+L+D  NYLRADY+I+CDS+KH+   VY+  M+++Y VGIPALYA+LLF  R +L D  A RE       T DLWKPY+P+ FYYEVIECGRR+LL G V+ +  +T+AQ+A  LM+A +F ++ E LAP+ S+ D W++RTGH VV+ SMY ALL K ++S +   SQ+V+E VL+     M+  V     VL +S  VE+R
Sbjct:  551 QGSTLVMNGTTAFVNNTCGANGGAL---------------ALLGG--LAVNIGTENVSFIGNAAEVAGGAVFVSGTGFGPIFTGARFISNSAQV-GGAVSTVGSGNLKENADISPPNPTTFDHCHFIDNRATATGGAIDSAAGQDAFVNSTFQGNRAGTGGGLRLAGTASLDTCSFVDNISDDQGGAAVS-NIGSLLSVENITFSGNVFDCDPGMYLDYNASGNPYEAACGGCETACDGCFF-------EPPVPPTCTDVMEHITSAGGTVTLEDLPVERGYWRASPSSEEVFACYNSDACLGGVTGRAGYCLKGYEGPYCAVCSDGYTTELAFACTRCSGGAGRIALAAVLAVVVLCVAFAVASYAMSGRVGDVRSGVVARLGQYIPLQSVKIVIVAWQILTQFTSVANVTYPDVYKRFLDGLDVFNFDLSWVLSAGCIFDIDFHDRLLASTVSPVIGLLFLAGTYAAAVSMNRGK-AESLQVIWNKHVSLVLLLTFLIYSSVSATLFKAFVCEELEDGTNYLRADYTIDCDSSKHKAFQVYAGFMVVVYVVGIPALYAFLLFRDRHVLKDHHADREQTARTTSTSDLWKPYKPSVFYYEVIECGRRVLLAGVVVFIFPNTAAQIAITLMMAFAFVMVSEGLAPFASKWDAWLNRTGHTVVFVSMYIALLLKVDVSGERAGSQRVYEIVLVAAHACMILAVMTETFVLTWSLKVEQR 1241          
BLAST of mRNA_H-elongata_contig14281.2961.1 vs. uniprot
Match: D7FHH1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHH1_ECTSI)

HSP 1 Score: 501 bits (1290), Expect = 1.040e-155
Identity = 303/722 (41.97%), Postives = 413/722 (57.20%), Query Frame = 1
Query:   13 STLTWSGETNFTSNKAGLHGGAVGSEDVDRIMAVSTDSTIASGERSSIDISXXXXXXXXXXXXXXGGMALLATDDGPKLDGVKFVLNSATSDG-----------GGVYATASKVTXXXXXXXXXXXXXXXXXVNSVNGIDAIVNTKFRGNTAQMGGALGLSGTVEMTNCSFLENESDFNGGPAIYVMIGSVSKMDKCSFSENVFNCENGTYFSYNGEGNIDDIICNGC--TCEGCILCNTCHYGEDKNIPTCEPAKEHSESYGG--TIEDLVIDEGYWRPTNDSTDILECYYAKACNGGVTGADEYCAQGYEGAYCSVCSENYGPGLGNTCSKCSGSTGGIVLAVFLGTLGTAMGVILALHLVSGAEGGRGHNLVYLAMRIIPMHTLKIIIVCWQILTQFSDVAYVTYPELYQRFLDVVDVVNFDLSWAVAVECIVDVDFHSTLLVSTLAPLFILGFLAFTYYVAVRRHRHRSAVALRSIWQKHLSVVLFLTFLVYSSVSSVIFQMFNCEKLDDSKNYLRADYSIECDSTKHRVMMVYSACMMLLYPVGIPALYAYLLFHKRAILA-DGARRETDESVQLTMDLWKPYRPARFYYEVIECGRRLLLTGGVLLVEDDTSAQVAAILMVAVSFAILLEILAPYESRIDIWVSRTGHAVVYGSMYFALLQKTEISNDTQASQKVFEWVLLTTQVLMVAVVAINAAVLAYSSVVEKRMVDRERVAP 2130
            STL+  G T F +N +G +GGA+        +      ++ +GE S +D S              G + +  T  GP    V F  NSA   G           GG        T                 V+S +G D   +T FRGN A  GGAL L+G   + NCSF+EN SD   G A+   +G +S++   +FS NVFNC   T+ +Y   G+  D  C+GC  TC+GC+        +   +P C     HS S GG  T+E L ID GYWR TN ST++L CY   AC GG+TGA EYC +GYEG YC++CS++Y   LG TCSKC    GGI+LA  L  +G    V +  ++    +   G  +     R +P+ TLKI++V WQI+TQF+  A VTYP++YQRFL+ +DV NFD+SW ++  C++D+DFH  LL+ST+ P+  L FLA TY    R +R  +A  L+ +W +H+S+VL L FLVYS VSSV+FQ F C++L+    YLRADY IECDS+KH+   VY+  M+LLYPVGIPA Y  LL   R +L  D   RE    V    +LW+PYRP+ +YYEVIECGRR+LLTG V+ +  +T+AQ+A  L++ V FA+L E L PY    D WVSR  HAVV+ S+Y ALL K ++SN+  +SQKVFE VL+     M+  V +   +L   S    R+ +++  AP
Sbjct:  317 STLSIDGPTAFVNNTSGENGGALA-------LLGGLSISVNTGETSFVDNSANLAG---------GAVYVSDTAIGPTFSDVIFDSNSAQVGGAVSSLGSGNVKGGENDQLLPTTFSRCRFTFNRATATGGAVDSASGQDLFEDTVFRGNQAVTGGALRLAGRASLVNCSFVENLSDDGEGAAVS-NVGVISEISNTTFSGNVFNCAPDTFLNYTS-GDALDEACSGCQTTCDGCV--------QPPVVPLCSDVIPHSRSDGGLVTLETLSIDPGYWRATNSSTEVLACYNVDACVGGITGATEYCVEGYEGPYCAICSDDYSAQLGFTCSKCPNRAGGILLATALAVIGLFTVVAVVSYVAWRVDPNTGCAMAGHLKRYLPLQTLKILVVAWQIVTQFTSAANVTYPDVYQRFLNGLDVFNFDISWVLSAGCVMDLDFHDRLLLSTIGPIMALLFLAATYRAGSRINRGNAAT-LQLVWDRHVSMVLLLVFLVYSGVSSVVFQTFACDQLEGGGEYLRADYRIECDSSKHQGFRVYAGFMILLYPVGIPAFYGALLLRDRDVLEKDPDGREDPPRVASISNLWQPYRPSVYYYEVIECGRRILLTGLVVFIYPNTAAQIAITLIMTVVFAVLSEALRPYAQAWDTWVSRVSHAVVFMSVYVALLLKVDVSNEKGSSQKVFEAVLVAAHACMILAVVVETILLGCPS----RVKEQDEPAP 1007          
BLAST of mRNA_H-elongata_contig14281.2961.1 vs. uniprot
Match: A0A6H5K0E9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K0E9_9PHAE)

HSP 1 Score: 511 bits (1316), Expect = 3.840e-155
Identity = 290/583 (49.74%), Postives = 382/583 (65.52%), Query Frame = 1
Query:  376 VNSVNGIDAIVNTKFRGNTAQMGGALGLSGTVEMTNCSFLENESDFNGGPAIYVMIGSVSKMDKCSFSENVFNCENGTYFSYNGEGNIDDIICNGC--TCEGCILCNTCHYGEDKNIPTCEPAKEHSESYGG--TIEDLVIDEGYWRPTNDSTDILECYYAKACNGGVTGADEYCAQGYEGAYCSVCSENYGPGLGNTCSKCS-GSTGGIVLAVFLGTLGTAMGVILALHLVSGAEG-GRGHNLVYLAMRIIPMHTLKIIIVCWQILTQFSDVAYVTYPELYQRFLDVVDVVNFDLSWAVAVECIVDVDFHSTLLVSTLAPLFILGFLAFTYYVAVRRHRHRSAVALRSIWQKHLSVVLFLTFLVYSSVSSVIFQMFNCEKLDDSKNYLRADYSIECDSTKHRVMMVYSACMMLLYPVGIPALYAYLLFHKRAILAD-GARRETDESVQLTMDLWKPYRPARFYYEVIECGRRLLLTGGVLLVEDDTSAQVAAILMVAVSFAILLEILAPYESRIDIWVSRTGHAVVYGSMYFALLQKTEISNDTQASQKVFEWVLLTTQVLMVAVVAINAAVLAYSSVVEKR 2103
            +NS  G DAI N+ F GN+A  GGAL L+G   ++NCSF EN SD   G A+   IG +S +   SF  N F+C  GT+ +  G  +  + ICNGC  TC+GC+      + E    P C    +HS S GG  T++ L ID G+WR +  ST++L CY+A AC GGVTGA  YC +GYEG YC +CS+ Y   L   CSKCS  S GGI +AV L  L   + V +  ++ SG  G GR   +V L  R IP+ +LKI+IV WQILTQF+ VA VTYP++YQ  LDV+DV NFDLSW ++  C+VD++FH  LLVST++P+  L  LA TY  A R +R      L  IW KH++VVL LTF VYSSVSS +F+ F C+ LD SK+YLRADYSIEC+S++HR + VY+  M+++Y VGIPALYA LLF  R +L D    RE    V+   +LW+PY+PA FYYEVIEC RR+LL G V+ +  +T+AQ+A  L++A +FA+L E LAPY SR D W+SR GH VV+ SMY ALL K ++S++  +SQ+VFE VL+   V M+  V + AAV A+S   E+R
Sbjct:  923 INSAAGEDAIENSVFEGNSAGTGGALRLAGEAYISNCSFRENTSDEGEGAAVS-NIGFISSITNASFDGNGFDCPAGTFRNVTGSVDHFEAICNGCETTCDGCV------FAEGSLAPICTEVMDHSTSDGGNVTLQTLSIDRGFWRASTSSTEVLACYHADACLGGVTGASGYCEEGYEGPYCGICSDGYTEQLSFACSKCSENSAGGIAVAVVLALLIVFLAVAVVSYVTSGEVGMGRKGGIVELVTRYIPLQSLKIVIVSWQILTQFTSVANVTYPDVYQDLLDVLDVFNFDLSWLLSAGCVVDMNFHGRLLVSTISPIVALLLLACTYAAAARINRGEPE-KLNIIWNKHVTVVLLLTFFVYSSVSSTLFRAFACDDLDYSKDYLRADYSIECNSSEHRGIQVYAGFMIVIYTVGIPALYAELLFKSRDVLKDEDPDREEPPRVKSISNLWEPYKPAVFYYEVIECFRRVLLAGVVVFIYPNTAAQIAVTLLIAFAFALLSEGLAPYASRWDTWISRVGHIVVFLSMYVALLLKVDVSDERASSQEVFESVLVAVHVCMILFVLVEAAVQAWSLREERR 1497          
BLAST of mRNA_H-elongata_contig14281.2961.1 vs. uniprot
Match: D8LSC0_ECTSI (Polymorphic Outer membrane protein G/I family n=3 Tax=Ectocarpus TaxID=2879 RepID=D8LSC0_ECTSI)

HSP 1 Score: 502 bits (1293), Expect = 6.400e-151
Identity = 274/613 (44.70%), Postives = 375/613 (61.17%), Query Frame = 1
Query:  376 VNSVNGIDAIVNTKFRGNTAQMGGALGLSGTVEMTNCSFLENESDFNGGPAIYVMIGSVSKMDKCSFSENVFNCENGTYFSYNGEGNIDDIICNGCTCEGCILCNTCHYGEDKNIPTCEPAKEHSESYGG--TIEDLVIDEGYWRPTNDSTDILECYYAKACNGGVTGADEYCAQGYEGAYCSVCSENYGPGLGNTCSKCSGSTGGIVLAVFLGTLGTAMGVILALHLVSGAEGGRGHNLVYLAMRIIPMHTLKIIIVCWQILTQFSDVAYVTYPELYQRFLDVVDVVNFDLSWAVAVECIVDVDFHSTLLVSTLAPLFILGFLAFTYYVAVRRHRHRSAVALRSIWQKHLSVVLFLTFLVYSSVSSVIFQMFNCEKLDDSKNYLRADYSIECDSTKHRVMMVYSACMMLLYPVGIPALYAYLLFHKRAILA--DGARRETDESVQLTMDLWKPYRPARFYYEVIECGRRLLLTGGVLLVEDDTSAQVAAILMVAVSFAILLEILAPYESRIDIWVSRTGHAVVYGSMYFALLQKTEISNDTQASQKVFEWVLLTTQVLMVAVVAINAAVLAYSSVVEKRMVDRERVAPLDDFSD------LEGSIWHVRTQP 2184
            ++S  G D  V+T F  N A  GGAL L+GT  + +CSF+EN SD  GG A+   IG+V   +  SFS N F+C +GT+  YN   ++ + +CNGC       C  C + +   +PTC    EHS S  G  T+E L I  GYWR T   T++L CY+A AC GGVTG   YC +GYEG YC++CSE Y   +  TC  CS + GGI LA  L  +G  + V +  ++ SG   G+G  +V    R IP+ ++KI++V WQI+TQF++VA VTYP +YQ FL+ ++V NFDLSW ++  C+VDVDFH  LL++T+ P+F    L  TY  AVR HR  +   L ++  KH+ +VL LTF VYSSVS+ +F+ F CE L+D K YL ADY IECDS+KH+   VY+  M+LLY  GIPALY++LLF  R +L   + A ++       T DLWKPY+P+ FYYEV+EC RR+LL G V+ +  ++SAQ+A  L+VA +F ++ E LAPY SR D W++R GH VV  SMY ALL K ++S +  +SQ VFE VL+   V+MV V      VLA +   E+R     +   L  F        ++   W+  T P
Sbjct: 1024 IDSAAGHDYFVDTTFEDNAAGTGGALRLAGTASINSCSFVENFSDDEGGAAVS-NIGTVESTENISFSANGFDCPSGTFLGYNASADLFEAVCNGCQ----TACVGCAFADPLLVPTCTDLLEHSTSSDGRDTLETLSIQAGYWRATTSGTEVLACYHADACLGGVTGTSGYCLEGYEGPYCAICSEGYSAQMSFTCRTCSDNAGGIALAAALAVVGLVLLVAVVSYVSSGERNGKGRGIVERVGRYIPLQSVKIVVVAWQIMTQFTNVANVTYPHVYQNFLNGLEVFNFDLSWMLSAGCVVDVDFHDRLLMATIGPIFAALLLVCTYAAAVRIHRGATET-LENVRHKHVFMVLLLTFFVYSSVSATLFRTFACETLEDGKTYLLADYRIECDSSKHKRFEVYAGFMVLLYTAGIPALYSFLLFRDRDVLKGREAAGQDLRSRATSTSDLWKPYKPSVFYYEVVECARRVLLAGVVVFIYPNSSAQIAITLIVAFTFVLISEGLAPYASRWDTWINRMGHVVVVASMYLALLLKVDVSKERSSSQGVFEAVLVVAHVVMVVVXVAETLVLALALRAERRRDQHLQEDRLPRFRSSGKAKAMQTHKWNAGTMP 1630          
BLAST of mRNA_H-elongata_contig14281.2961.1 vs. uniprot
Match: D8LIY0_ECTSI (Polymorphic Outer membrane protein G/I family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIY0_ECTSI)

HSP 1 Score: 485 bits (1248), Expect = 1.180e-146
Identity = 286/705 (40.57%), Postives = 387/705 (54.89%), Query Frame = 1
Query:    1 ITRASTLTWSGETNFTSNKAGLHGGAVGSEDVDRIMAVSTDSTIASGERSSIDISXXXXXXXXXXXXXXGGMAL-----LATDDGPKLDGVKFVLNSATSDGGGVYATAS----------------------------------------KVTXXXXXXXXXXXXXXXXXVNSVNGIDAIVNTKFRGNTAQMGGALGLSGTVEMTNCSFLENESDFNGGPAIYVMIGSVSKMDKCSFSENVFNCENGTYFSYNGEGNIDDIICNGCTCEGCILCNTCHYGEDKNIPTCEPAKEHSESYGG--TIEDLVIDEGYWRPTNDSTDILECYYAKACNGGVTGADEYCAQGYEGAYCSVCSENYGPGLGNTCSKCSGSTGGIVLAVFLGTLGTAMGVILALHLVSGAEGGRGHNLVYLAMRIIPMHTLKIIIVCWQILTQFSDVAYVTYPELYQRFLDVVDVVNFDLSWAVAVECIVDVDFHSTLLVSTLAPLFILGFLAFTYYVAVRRHRHRSAVALRSIWQKHLSVVLFLTFLVYSSVSSVIFQMFNCEKLDDSKNYLRADYSIECDSTKHRVMMVYSACMMLLYPVGIPALYAYLLFHKRAILA--DGARRETDESVQLTMDLWKPYRPARFYYEVIECGRRLLLTGGVLLVEDDTSAQVAAILMVAVSFAILLEILAPYESRIDIWVSRTGHAVVYGSMYFALLQK 1968
            I  AST +W+G TNFTSN+A   GGA        I++   DS     E S+++ +              GGMAL     L  D      G+ F+ N+A   GG V+ +++                                          T                 +++  G D  V+T F  N A  GGAL L+GT  + NCSF+EN S+  GG A+   IG VS  +K +FS N F+C  G + +YN   ++ + +C+GC            + E   +P C    EHS S  G  T+E L I  GYWR T  S ++L CY+ +AC GGVTG   YC +GY+G YC+VCS  +    G TC +CS S GGIVLAV L   G    V++  ++ SG   GRG  +V      IP+ ++KI++V WQ++TQF+ VA +TYP++YQ FLD + + NFDL W ++  C+ DVDFH  LL+ST+ P+  +  LA TY  A R HR  +   L+++W KH+ VVL L+F VYSSVSS +F+ F CE L D KNYLRADY IECDS++H+   VY+  MML+Y VGIP LY +LL+  R  L   D  +      V  T DLWKPYRP+ FYYEVIECGRR+LL G V+ +  ++ AQ+A  L++A  F ++ E L+PY SR D W+SRTGH VV  SMY ALL K
Sbjct:  675 IRNASTASWTGVTNFTSNQAFFDGGA--------IVSPQLDSEYNPSE-STLNFNGTTTFFNNRCGGNGGGMALYGGCALVIDTEM---GISFIENTAAVSGGAVFVSSAGTGLAFPTTSFVSNSAQIGGAVATFGSGGSKGVEDIEPPNPTTFDRCRFVGNRATATGGAIDTAAGYDFFVDTTFEDNAAGTGGALRLAGTASIINCSFVENYSNDGGGAAVS-NIGIVSSAEKINFSGNGFDCPTGMFLAYNESDDLFETVCDGCQTXXXXXA----FAEPLLVPMCRDLLEHSTSPDGKLTLEALSIQRGYWRATTTSEEVLACYHPEACLGGVTGTAGYCLEGYQGPYCAVCSHGFSAQFGFTCRECSDSAGGIVLAVALAVAGIFAAVVVVSYVTSGKRNGRGQGIVERVALYIPLQSVKIVVVAWQVVTQFTVVANITYPDVYQTFLDGLKLFNFDLGWILSAGCVTDVDFHDRLLMSTIGPIIAVMVLACTYAAATRIHRGATDTTLQNVWDKHVLVVLLLSFFVYSSVSSTLFRTFACETLGDGKNYLRADYRIECDSSRHKGFEVYAGIMMLVYTVGIPGLYGFLLYRDRDFLKERDTCQEPPPSRVTSTSDLWKPYRPSVFYYEVIECGRRVLLAGVVVFIYPNSGAQIAITLVIAFVFVLISESLSPYASRWDTWISRTGHVVVVTSMYVALLLK 1362          
BLAST of mRNA_H-elongata_contig14281.2961.1 vs. uniprot
Match: D7G5Y7_ECTSI (Polymorphic Outer membrane protein G/I family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5Y7_ECTSI)

HSP 1 Score: 487 bits (1253), Expect = 2.540e-143
Identity = 274/583 (47.00%), Postives = 364/583 (62.44%), Query Frame = 1
Query:  376 VNSVNGIDAIVNTKFRGNTAQMGGALGLSGTVEMTNCSFLENESDFNGGPAIYVMIGSVSKMDKCSFSENVFNCENGTYFSYNGEGNIDDIICNGCTC----EGCILCNTCHYGEDKNIPTCEPAKEHSESYGGT--IEDLVIDEGYWRPTNDSTDILECYYAKACNGGVTGADEYCAQGYEGAYCSVCSENYGPGLGNTCSKCSGSTGGIVLAVFLGTLGTAMGVILALHLVSGAEGGRGHNLVYLAMRIIPMHTLKIIIVCWQILTQFSDVAYVTYPELYQRFLDVVDVVNFDLSWAVAVECIVDVDFHSTLLVSTLAPLFILGFLAFTYYVAVRRHRHRSAVALRSIWQKHLSVVLFLTFLVYSSVSSVIFQMFNCEKLDDSKNYLRADYSIECDSTKHRVMMVYSACMMLLYPVGIPALYAYLLFHKRAILA-DGARRETDESVQLTMDLWKPYRPARFYYEVIECGRRLLLTGGVLLVEDDTSAQVAAILMVAVSFAILLEILAPYESRIDIWVSRTGHAVVYGSMYFALLQKTEISNDTQASQKVFEWVLLTTQVLMVAVVAINAAVLAYSSVVEKR 2103
            V +  G D  V+  F       GGAL L+GT  + NCSF+EN S+  GG A+   IGS+SKMD  S+  NVF+C  G +  +N  G+ ++  C+GC      +GC       + E   +P C  A EH+ S GGT  I  L +D+G+WR T  + D+L CY A AC  GVT +   C  GYEG YCS+CS+ Y  GL   CS+CS S GGI+LA FL  +   + V +  ++VS   G      V    R IP+ + KI++V WQILTQF+ VA VTYP++YQRFLD + V NFDLSW ++  CIV VDFH  LL+ST+ P+  L FL +TY  A R +R  +   L+ IW +H+S+VL LT  VYSSVSS +FQ F CE L D + YLRADY I CDS+KH+ + VY+  M+++Y VGIPALY  LLF  R +L   GA RE    V  T +LWKPY+P+ FYYEVIECGRR+LL G V+ +  +T+ Q+A  L++A +F ++ E LAPY SR D W+SR GHAVV+ SMY ALL K ++SN+   SQ+VFE VL+     M+ V+ I   VL  +  V +R
Sbjct: 1479 VETAAGQDVFVDCLFXXXXXGTGGALRLAGTATLENCSFVENVSEDGGGAAVS-NIGSISKMDNISYRGNVFSCALGMFLDFNASGDPNEAACDGCQTPCDDDGC-------FEEPPLVPICALAMEHTGSAGGTNNITLLRVDDGFWRATPYAIDVLPCYNANACLAGVTNSSGSCLDGYEGPYCSICSDGYTAGLSFKCSECSDSAGGIILASFLAVVALLVAVAVVSYVVSDKVGEGSRGTVERLGRYIPLQSAKIVVVSWQILTQFTAVANVTYPDVYQRFLDGLGVFNFDLSWVLSAGCIVVVDFHDRLLISTIGPIVALLFLCWTYAAATRINRGATET-LQVIWNRHVSMVLLLTVFVYSSVSSTLFQTFACESLADGETYLRADYRITCDSSKHKALQVYAGVMVVVYTVGIPALYGVLLFRDRDVLKRSGADREETARVISTSELWKPYKPSVFYYEVIECGRRVLLAGVVVFIYPNTAPQIAITLLMAFAFVVVSEGLAPYASRWDTWLSRMGHAVVFVSMYVALLLKVDVSNERVESQRVFEVVLVAAHACMILVIVIETVVLTCALTVGER 2052          
BLAST of mRNA_H-elongata_contig14281.2961.1 vs. uniprot
Match: D7G2X5_ECTSI (Adhesin-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2X5_ECTSI)

HSP 1 Score: 474 bits (1219), Expect = 5.510e-142
Identity = 270/616 (43.83%), Postives = 370/616 (60.06%), Query Frame = 1
Query:  244 KLDGVKFVLNSATSDGGGVYATASKVTXXXXXXXXXXXXXXXXXVNSVNGIDAIVNTKFRGNTAQMGGALGLSGTVEMTNCSFLENESDFNGGPAIYVMIGSVSKMDKCSFSENVFNCENGTYFSYNGEGN-IDDIICNGCTCEGCILCNTCHYGEDKNIPTCEPAKEHSESYGG--TIEDLVIDEGYWRPTNDSTDILECYYAKACNGGVTGADEYCAQGYEGAYCSVCSENYGPGLGNTCSKCSGSTGGIVLAVFLGTLGTAMGVILALHLVSGAEGGRGHNLVYLAMRIIPMHTLKIIIVCWQILTQFSDVAYVTYPELYQRFLDVVDVVNFDLSWAVAVECIVDVDFHSTLLVSTLAPLFILGFLAFTYYVAVRRHRHRSAVALRSIWQKHLSVVLFLTFLVYSSVSSVIFQMFNCEKLDDSKNYLRADYSIECDSTKHRVMMVYSACMMLLYPVGIPALYAYLLFHKRAILA-DGARRETDESVQLTMDLWKPYRPARFYYEVIECGRRLLLTGGVLLVEDDTSAQVAAILMVAVSFAILLEILAPYESRIDIWVSRTGHAVVYGSMYFALLQKTEISNDTQASQKVFEWVLLTTQVLMVAVVAINAAVLA 2079
            K D  +F+ N AT+ GG V                          +S  G D +VN+ F+GN+A++GGAL L+G             S    G A+   IG VS M   SF+ N F C    +  Y+   N   + +C+GC     + C+ C + E   +PTC    +H  S GG  T+E L ID GYWR T+ S +IL CY A AC GGVTG   YC + YEG YCS+CS+ Y   LG +CSKC   +GGIV AV +  L   + V++ ++++SG  G R   ++      +P+ ++KI+IV WQILTQF+  A V YP +YQ+FLD + V  FDL W ++  C++D+ FH  LL +T+ P+F +  LA TY  A R +R  +   LR IW KH+ V L LTFLVYSSVSS +F+ F C++L+D KNYLR DY IECDS+KH+V  VY+  M+LLYP+GIP LY+ LLF  R +L  D A R+    V+ T +LW+PY+P+ FYYEVIECGRR+LLTG V+ +  +T+AQ+A  LM+A  FA+L E ++PY SR + WV+R GH VV  SMY ALL K ++S++   SQ VFE VL+T    M+  V +   V+A
Sbjct:  821 KFDRCRFIDNVATTSGGAV--------------------------DSAAGQDIVVNSVFKGNSAEVGGALRLAGXXXXXXXXXXXXVSGRQEGAAVS-NIGLVSTMANSSFTGNGFTCGPDLFLEYDATDNGTFEAVCDGCR----VACDGCSFDEPPAVPTCSDVMDHGTSTGGKVTLETLSIDPGYWRATSSSKEILPCYNADACLGGVTGTAGYCLESYEGPYCSICSDGYASNLGYSCSKCFSRSGGIVFAVGMAVLALFVAVVVIMYIMSGEAGERRMYVLERLGWYVPLQSVKIVIVSWQILTQFASAANVVYPGVYQQFLDGLKVFGFDLGWLMSAGCVLDMGFHGRLLAATIGPIFAVLLLAGTYAAATRINREANE-KLRIIWDKHVFVFLLLTFLVYSSVSSTLFKTFACDELEDGKNYLRTDYRIECDSSKHKVFQVYAGFMILLYPLGIPMLYSILLFKDREVLKKDKADRDDSARVKSTSELWQPYKPSVFYYEVIECGRRILLTGIVVFIYPNTAAQLAITLMMAFFFALLSEAISPYSSRWETWVNRMGHVVVAVSMYVALLLKVDVSDERADSQSVFEAVLVTVHACMILSVVVETFVVA 1404          
BLAST of mRNA_H-elongata_contig14281.2961.1 vs. uniprot
Match: A0A6H5JY65_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JY65_9PHAE)

HSP 1 Score: 478 bits (1231), Expect = 1.280e-141
Identity = 260/574 (45.30%), Postives = 359/574 (62.54%), Query Frame = 1
Query:  376 VNSVNGIDAIVNTKFRGNTAQMGGALGLSGTVEMTNCSFLENESDFNGGPAIYVMIGSVSKMDKCSFSENVFNCENGTYFSYNGEGNIDDIICNGCTCEGCILCNTCHYGEDKNIPTCEPAKEHSESYGG--TIEDLVIDEGYWRPTNDSTDILECYYAKACNGGVTGADEYCAQGYEGAYCSVCSENYGPGLGNTCSKCSGSTGGIVLAVFLGTLGTAMGVILALHLVSGAEGGRGHNLVYLAMRIIPMHTLKIIIVCWQILTQFSDVAYVTYPELYQRFLDVVDVVNFDLSWAVAVECIVDVDFHSTLLVSTLAPLFILGFLAFTYYVAVRRHRHRSAVALRSIWQKHLSVVLFLTFLVYSSVSSVIFQMFNCEKLDDSKNYLRADYSIECDSTKHRVMMVYSACMMLLYPVGIPALYAYLLFHKRAILA--DGARRETDESVQLTMDLWKPYRPARFYYEVIECGRRLLLTGGVLLVEDDTSAQVAAILMVAVSFAILLEILAPYESRIDIWVSRTGHAVVYGSMYFALLQKTEISNDTQASQKVFEWVLLTTQVLMVAVVAINAAVLAYS 2085
            + +  G D  +N+ F  N A +GGAL L G+  +TNC+F++N ++ + GPA+   +G +       FS NV +CENG Y   + +G+    +C+GC         +   G+   +P C    +H+ S GG  TIE L +  GYWR TNDS ++L CY   AC GG+T    +C +GYEG YCSVCSE Y   L  TC++C    GGI + V +G       + L +HLVSG   G    +++  ++ +P+ ++KI++V WQILTQFS VA VTYP++YQRFLD V+++NFD+ W  +  C+V+VDFH  LLV+T+ PL  L  LA TY VA RR     A AL+ I  KH+S+VL +TFLVYSSVS+ +FQ F CE LDD K YLRADY IECDS++H+   V++  M+L+YPVGIP  Y YLL+  R +L   D  +R+T   VQ   DLW PY+P RFYYEVIEC RR+ LTG V+ +  +T+AQVA  LM+A SF +   +LAPY S+ D  +S  GH +V+ SMY ALL K ++S++   SQ+VF  VL+     MV  V +   V+ YS
Sbjct: 1188 IETAAGYDFAINSVFEANAAGVGGALRLGGSAILTNCTFIDNTAE-DEGPAVS-NLGVLDLEGTSRFSGNVLSCENGMYLD-SVDGDRYQTVCDGCPVNNSDWIVSVENGD--RVPICVVQLDHTRSEGGDTTIETLELSSGYWRATNDSANVLACYNEDACVGGMTNDPAFCQRGYEGPYCSVCSEGYSMSLAFTCTECVDDHGGIAIMVVVGVFVLGAAIALCMHLVSGEMEGARRGVIHRVVKRLPLQSIKIVVVVWQILTQFSSVANVTYPDVYQRFLDGVNILNFDVLWIPSAGCLVEVDFHGRLLVATIGPLVALALLAITYTVAKRRSSGSEA-ALQKIRHKHMSMVLLITFLVYSSVSATVFQSFACEDLDDHKKYLRADYRIECDSSEHQAFQVFAGIMILVYPVGIPLFYGYLLYKHRRVLKSEDAGKRQTSPQVQPISDLWFPYKPGRFYYEVIECVRRMSLTGVVVFIYPNTAAQVAVTLMIAFSFVVTSVVLAPYVSKWDASISLVGHVIVFTSMYTALLSKVDVSDERADSQEVFAGVLVAAHACMVVAVVVETIVIFYS 1755          
BLAST of mRNA_H-elongata_contig14281.2961.1 vs. uniprot
Match: D7FTI5_ECTSI (Polymorphic outer membrane protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTI5_ECTSI)

HSP 1 Score: 471 bits (1211), Expect = 1.480e-139
Identity = 266/577 (46.10%), Postives = 362/577 (62.74%), Query Frame = 1
Query:  376 VNSVNGIDAIVNTKFRGNTAQMGGALGLSGTVEMTNCSFLENESDFNGGPAIYVMIGSVSKMDKCSFSENVFNCENGTYFSYNGEGNID-DIICNGC--TCEGCILCNTCHYGEDKNIPTCEPAKEHSESYGG--TIEDLVIDEGYWRPTNDSTDILECYYAKACNGGVTGADEYCAQGYEGAYCSVCSENYGPGLGNTCSKC-SGSTGGIVLAVFLGTLGTAMGVILALHLVSGAEG-GRGHNLVYLAMRIIPMHTLKIIIVCWQILTQFSDVAYVTYPELYQRFLDVVDVVNFDLSWAVAVECIVDVDFHSTLLVSTLAPLFILGFLAFTYYVAVRRHRHRSAVALRSIWQKHLSVVLFLTFLVYSSVSSVIFQMFNCEKLDDSKNYLRADYSIECDSTKHRVMMVYSACMMLLYPVGIPALYAYLLFHKRAILA-DGARRETDESVQLTMDLWKPYRPARFYYEVIECGRRLLLTGGVLLVEDDTSAQVAAILMVAVSFAILLEILAPYESRIDIWVSRTGHAVVYGSMYFALLQKTEISNDTQASQKVFEWVLLTTQVLMVAVVAINAAVLAY 2082
            + S  G DA   + F GN+A  GGAL L+G     NCSF+ N +D   G A+   IG +S ++   FS N F+C +  Y  +  + +   +++C+GC  TCEGC+      + E   +P C    EH+ S GG  T+E L ID GYWR T  S D+L CY+A+AC GGVT    YC +GYEG YCSVCS  Y   LG  CSKC   +TGGIV+ V L    T +   +  ++ SG +G G G   +    R IP+ ++KI+I  WQILTQF+ +A VTYP++Y+ FL V+D+ NFDL WA++V C +D+DFH  LLVST++P+  L FLA TY+ A   +R R    L ++  KH S+VL LTF VYSSVSS++F+ F CE+L D K YLR+DY IECDS+KH+   VY+  M+L+Y VGIPALYA LLF  R +L  D ++R     V    DLW+PY    FYYEVIECGRR+LL G V+ +  +T+AQ+A  LM+A +F ++ E L PY+S  D W++R GH VV+ SM+  LL K  +S++  ASQ+VFE VL+    LMV  + +   VL +
Sbjct: 1033 IESAAGKDAFNGSIFEGNSAGTGGALRLAGAAYFFNCSFVGNTADEGEGAAVS-NIGYISAVESNFFSGNRFDCRSSMYLDFIQQSDDPFEVMCSGCEVTCEGCV------FDEGLLVPACTEVMEHATSDGGNITLEALSIDSGYWRATESSEDVLACYHAEACLGGVTATSGYCLEGYEGPYCSVCSNGYSEQLGFVCSKCPEKNTGGIVILVVLAVGTTIVLAAIYSYVTSGEDGMGTGCGWIERVTRYIPLQSVKIVIAAWQILTQFTSIANVTYPDVYEDFLGVLDMFNFDLGWALSVSCTIDMDFHDRLLVSTISPIAALLFLACTYFRAWSLYR-RKPDTLGAVQHKHASMVLLLTFFVYSSVSSILFRSFACEELADRKIYLRSDYRIECDSSKHKGFQVYAVFMILVYTVGIPALYAGLLFRDRDLLKQDTSKRRDPPRVTSIADLWEPYNRWAFYYEVIECGRRVLLAGVVVFIYPNTAAQIAVTLMIAFAFVVVSEALNPYKSGWDRWINRMGHVVVFSSMFLGLLLKVNVSDEHVASQRVFEIVLVAVHALMVMAIVVETVVLFF 1601          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig14281.2961.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G2Z8_ECTSI3.620e-16950.60Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G301_ECTSI1.940e-15742.34Polymorphic Outer membrane protein G/I family n=1 ... [more]
D7FHH1_ECTSI1.040e-15541.97Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K0E9_9PHAE3.840e-15549.74Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D8LSC0_ECTSI6.400e-15144.70Polymorphic Outer membrane protein G/I family n=3 ... [more]
D8LIY0_ECTSI1.180e-14640.57Polymorphic Outer membrane protein G/I family n=1 ... [more]
D7G5Y7_ECTSI2.540e-14347.00Polymorphic Outer membrane protein G/I family n=1 ... [more]
D7G2X5_ECTSI5.510e-14243.83Adhesin-like protein n=1 Tax=Ectocarpus siliculosu... [more]
A0A6H5JY65_9PHAE1.280e-14145.30Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FTI5_ECTSI1.480e-13946.10Polymorphic outer membrane protein n=1 Tax=Ectocar... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig14281contigH-elongata_contig14281:1479..5859 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score543.1
Seed ortholog evalue1.9e-151
Seed eggNOG ortholog2880.D7G2Z8
EggNOG OGs2BFIX@1,2S176@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons5
Model size3446
Cds size2130
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929847.7475808-UTR-H-elongata_contig14281:1478..26891622929847.7475808-UTR-H-elongata_contig14281:1478..2689Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig14281 1479..2689 -
1691679181.8134997-UTR-H-elongata_contig14281:1478..26891691679181.8134997-UTR-H-elongata_contig14281:1478..2689Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig14281 1479..2689 -
1622929847.8390653-UTR-H-elongata_contig14281:5754..58591622929847.8390653-UTR-H-elongata_contig14281:5754..5859Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig14281 5755..5859 -
1691679181.8663518-UTR-H-elongata_contig14281:5754..58591691679181.8663518-UTR-H-elongata_contig14281:5754..5859Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig14281 5755..5859 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929847.7660651-CDS-H-elongata_contig14281:2689..37601622929847.7660651-CDS-H-elongata_contig14281:2689..3760Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig14281 2690..3760 -
1691679181.8227506-CDS-H-elongata_contig14281:2689..37601691679181.8227506-CDS-H-elongata_contig14281:2689..3760Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig14281 2690..3760 -
1622929847.7781873-CDS-H-elongata_contig14281:4172..44261622929847.7781873-CDS-H-elongata_contig14281:4172..4426Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig14281 4173..4426 -
1691679181.8306851-CDS-H-elongata_contig14281:4172..44261691679181.8306851-CDS-H-elongata_contig14281:4172..4426Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig14281 4173..4426 -
1622929847.7924328-CDS-H-elongata_contig14281:4654..49371622929847.7924328-CDS-H-elongata_contig14281:4654..4937Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig14281 4655..4937 -
1691679181.838861-CDS-H-elongata_contig14281:4654..49371691679181.838861-CDS-H-elongata_contig14281:4654..4937Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig14281 4655..4937 -
1622929847.8090265-CDS-H-elongata_contig14281:5145..55461622929847.8090265-CDS-H-elongata_contig14281:5145..5546Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig14281 5146..5546 -
1691679181.8480134-CDS-H-elongata_contig14281:5145..55461691679181.8480134-CDS-H-elongata_contig14281:5145..5546Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig14281 5146..5546 -
1622929847.8201685-CDS-H-elongata_contig14281:5633..57541622929847.8201685-CDS-H-elongata_contig14281:5633..5754Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig14281 5634..5754 -
1691679181.857161-CDS-H-elongata_contig14281:5633..57541691679181.857161-CDS-H-elongata_contig14281:5633..5754Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig14281 5634..5754 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig14281.2961.1prot_H-elongata_contig14281.2961.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig14281 2690..5754 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig14281.2961.1

>prot_H-elongata_contig14281.2961.1 ID=prot_H-elongata_contig14281.2961.1|Name=mRNA_H-elongata_contig14281.2961.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=710bp
MAVSTDSTIASGERSSIDISGRTNFIDNMSGGSGGGMALLATDDGPKLDG
VKFVLNSATSDGGGVYATASKVTIDGCIFEYNIAEEAGGAVNSVNGIDAI
VNTKFRGNTAQMGGALGLSGTVEMTNCSFLENESDFNGGPAIYVMIGSVS
KMDKCSFSENVFNCENGTYFSYNGEGNIDDIICNGCTCEGCILCNTCHYG
EDKNIPTCEPAKEHSESYGGTIEDLVIDEGYWRPTNDSTDILECYYAKAC
NGGVTGADEYCAQGYEGAYCSVCSENYGPGLGNTCSKCSGSTGGIVLAVF
LGTLGTAMGVILALHLVSGAEGGRGHNLVYLAMRIIPMHTLKIIIVCWQI
LTQFSDVAYVTYPELYQRFLDVVDVVNFDLSWAVAVECIVDVDFHSTLLV
STLAPLFILGFLAFTYYVAVRRHRHRSAVALRSIWQKHLSVVLFLTFLVY
SSVSSVIFQMFNCEKLDDSKNYLRADYSIECDSTKHRVMMVYSACMMLLY
PVGIPALYAYLLFHKRAILADGARRETDESVQLTMDLWKPYRPARFYYEV
IECGRRLLLTGGVLLVEDDTSAQVAAILMVAVSFAILLEILAPYESRIDI
WVSRTGHAVVYGSMYFALLQKTEISNDTQASQKVFEWVLLTTQVLMVAVV
AINAAVLAYSSVVEKRMVDRERVAPLDDFSDLEGSIWHVRTQPRACLNPR
RQARMDDPS*
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mRNA from alignment at H-elongata_contig14281:1479..5859-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig14281.2961.1 ID=mRNA_H-elongata_contig14281.2961.1|Name=mRNA_H-elongata_contig14281.2961.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=4381bp|location=Sequence derived from alignment at H-elongata_contig14281:1479..5859- (Himanthalia elongata Himel1 dioecious)
ATTACACGCGCCTCGACGCTAACATGGAGTGGTGAAACAAACTTTACCTC AAATAAGGCTGGTTTGCATGGCGGAGCGGTGGGGTCAGAGGATGTCGATC GGATTATGGCAGTAAGCACGGACAGTACAATAGCATCAGGCGAGCGGTCT TCCATAGATATCAGCGGCAGAACCAACTTCATCGACAACATGAGCGGCGG AAGTGGCGGTGGCATGGCCTTATTGGGCAAGCTGGCGGCAACGTTTTCAA CGCCTGGGGTCACCTTCTTGAGAAATTCAGCGGATGCATCCGGGGGTGGC GTCTTTATTTCAGCCACGGACGATGGCCCTAAGTTGGATGGCGTAAAATT TGTTTTGAACTCTGCTACTAGCGATGGCGGAGGCGTGTATGCGACGGCGA GCAAAGTTACTATTGATGGTTGTATCTTTGAATATAACATAGCAGAAGAA GCTGGAGGAGCTGTCAACAGTGTCAATGGTATAGATGCGATCGTCAATAC GAAGTTTCGTGGAAATACAGCTCAGATGGGCGGGGCATTGGGGCTCTCTG GCACAGTTGAGATGACCAATTGCTCGTTTTTGGAGAACGAATCGGACTTT AACGGCGGACCAGCTATTTACGTTATGATCGGCTCCGTATCAAAAATGGA CAAATGCTCCTTCTCCGAAAATGTTTTCAATTGTGAAAATGGGACGTATT TTAGCTATAACGGGGTGAGCAAATTGATTTCGAATGACGTTAGGCTGCTG ATATGTCCTTTATTTTGTCGTCTGGTTTCCTTTCCGGATGTTTGAGCCGA TCAATGACCAAACCAGGAAGTTCTTTACCGCCCGCACAAACCACTTACAT ATAAGTAAAGTCGATTCTGGAAGCGCTTTCACATTTAATTTATGCTTCCC CCACTTGCTGATCCCATCGCAGGAGGGAAACATAGACGATATTATATGCA ACGGATGTACCTGCGAGGGATGCATCCTGTGCAATACTTGTCACTACGGT GAAGATAAAAATATCCCGACGTGTGAGCCAGCCAAGGAGCATTCTGAGAG CTATGGTGGCACAATCGAAGACCTCGTGATCGATGAGGGGTATTGGCGGC CGACCAACGACAGTACCGACATTTTAGAGTGCTACTACGCGAAAGCCTGT AATGGCGGGGTGACGGGCGCTGACGAGTATTGCGCACAAGGCTACGAAGG CGCATGTAAGATTCTCCGAACGTTATGATTCCATGATAAATTGGGATTTG ACTGGAGCTTGAATTTCTATGATATTATGCTCACGTGTATAGTTCAATCG AGTAGGGAGAAATATGGCTTGGCAAGGGACTTAAATTATCAAATTCGATG GGAATATTGATTTTACAAAATGATGTGTGAAAAATACTTGTGACTAATCC CTCCTGCCTATCTTTTTTTTCTGCTGGTTTCAGATTGCTCGGTTTGCTCG GAAAACTATGGTCCCGGTTTGGGAAATACCTGCTCAAAATGCTCCGGCAG CACGGGTGGTATCGTGCTCGCCGTTTTTCTCGGCACATTGGGTACAGCGA TGGGAGTAATCCTTGCACTTCACCTAGTATCGGGAGCGGAGGGGGGACGA GGGCATAACCTTGTGTATCTTGCCATGCGCATCATACCTATGCACACTTT AAAGATCATCATCGTTTGCTGGCAGATTTTAACACAGGTAAGATGTAGAA CAGTTTGATAATAACACGGGTAGCAGTGCACAAGGGATAAGAAACACAGC TTGCTTCCCCCCTGCTCATCGAAAGTCCTCTGTATATCGCTTTCCTTATT GAGGAGGGTTTGAAGGATTTGAATGATTTCATATATTAAAAAAAAAGACA ATCGATGCCTTGTGCAAGAGGTTTGAATACTCGCTGTAATCGAGTGTTTG GAAATCTTCGTCGGGGCTTTCCTACCGACCCTGCCTTCCGCTCGGTTCGC ACTCGACTTTAATACCCCGCCCTCGCCGACTAATATATCTGCCTGATACC CGACAAAATGTTTTAAAATATAATATATAACATGCAAGACAAAAGCAAAC ACACCCTCCCTCCCCTCCTTTCTCGTGGTGCATATGTAATTCAAAACAGT TTTCTGATGTGGCATACGTGACCTACCCAGAACTGTACCAGCGCTTCCTC GACGTGGTTGACGTGGTCAACTTCGATCTCAGCTGGGCTGTCGCTGTTGA GTGTATCGTAGACGTCGATTTTCACAGCACATTGCTTGTCTCGACGTTGG CGCCTCTGTTTATATTGGGATTTCTGGCCTTTACGTACTACGTCGCAGTG AGAAGGCACCGCCATCGGTCGGCAGTGGCTCTTCGAAGTATCTGGCAAAA GCACCTATCAGTTGTGCTCTTTTTGACGTTTTTGGTGTACTCGAGTGTTA GTTCTGTAATTTTTCAGATGTTTAATTGCGAGAAACTTGACGACAGTAAA AACTATCTTCGGGCAGACTACAGCATCGAGTGCGACTCTACGAAACATAG AGTTATGATGGTATATTCTGCCTGCATGATGCTGCTGTATCCTGTAGGCA TACCAGCCCTTTATGCATACCTGCTGTTTCACAAACGTGCTATTTTGGCC GATGGAGCTCGTCGGGAGACCGATGAGAGCGTGCAGTTGACCATGGATTT GTGGAAACCATACAGGCCGGCTCGATTCTACTACGAGGTGATAGAATGCG GTCGAAGGCTGCTGCTAACAGGTGGAGTACTTCTAGTTGAGGACGATACG TCAGCGCAGGTGGCTGCGATTTTGATGGTTGCGGTAAGCTTTGCGATCCT ACTAGAGATACTTGCCCCGTATGAATCACGCATTGACATCTGGGTTAGCC GCACAGGACACGCAGTAGTCTACGGAAGCATGTACTTCGCTCTTCTTCAG AAAACCGAAATCTCCAATGATACGCAAGCCAGTCAAAAGGTTTTCGAGTG GGTACTTCTCACTACCCAAGTTTTGATGGTAGCAGTCGTGGCAATTAACG CTGCCGTCTTGGCCTATTCATCAGTTGTTGAAAAACGGATGGTCGATCGA GAAAGGGTAGCTCCCTTAGATGACTTTTCTGACCTAGAAGGATCGATTTG GCATGTTCGAACCCAACCGCGGGCTTGTTTGAACCCTCGGCGGCAAGCTC GTATGGATGACCCTTCGTGATCGTGCCATGGTGGGTGCGTAAGTGACGAA AAAATATCCATATTTTCGTGTTTATCCCCGCCAGGTATACCAGGAATAAA TCGTCGTGTTACCCTCGACGATTACACTTACCTCTGCCGTTTGTCTCTAC GAGATACCCACGGTTCTTGTAAAAACATATTGTGCTGTGGATGGCGAGGT CATCTGATGATGTGACCTATCGCCGCAACAAGTTCCCCTCGCCTTTTGGC TTTAGACCACACCAGGTTTTGTTTACTCATTTTATTCACCGTTTGAACAG ACTGGTTTTAAGGCGTTGCACTTCCACCTTGTCGAATAGCAGCGCGTTGT GAATTCAATTCGGGTACATTTGGATCGCTGGGGGGGTTATTGGTGGTGTA ATAGGCTCTTCGGGGTTAAATACTGATCGACCTATGTGTGGATGAGTGCC GGTCCGCTCTACAAGATGTTTGGTTTCCTATGGAGGCCCGAGATGGATTG GAAACGTGGTGGGCGGCTTAAAAAAGTGATTCTTGCAACTGCTGAGGTAA AACGACTCTTAGGTAGAATGGGAAGTACGGTTTGTTCGATTTCTCCGATT CTTCTTGCGGAGGGTGCTATTACTCGCCGCGCTATGAGAAATGTGATACG TGTTTCTAGTATTACCGACAGTAGGGGCGGTTCAAATCCTCCCACGCACG CGTCGTCATCAATAATTCAAGCCCTGTGATTCGTGAGGGATAATACCGGT ATAATCAGCGAAATTAGCAAAATGAACAAACGGATGCTGCAAAATACTAA GAGGCGGATAATGTTTGGGATAAGATATTGGATGGAGGAAGGTATATGAG AGAATGAGATGCTTAGTAGGGGATGTCGAAATAGTTGAATAAGGGGAATA TAAACCGCCAAAATGGGTTGCAGAACTTCATGTGTTTGTCGTCGCTGCCG TCTACGAATAAGATGTGCACCGGAGGTATGATTAGGTGGCTTGCAGAAAA GTCTGAGCAAATCACTACTAGTTTCCAGATGTTGTTTAGAGGAAGACATT CAATTGTTTGGCTGTTGTCTGAATTTACACTACTTTTGGATCGCTCTAAA AATGTGGAAAATAGGCCTCCTAACGTCATGTTCAAGTACGTGGTATATCG CTGCTCCATCCAACGTAAATCACCTCACGCGCTAACCCGTTGTACAAACC TTCCGCGGGGGTGCCTTCTACTTATTGTTTC
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Coding sequence (CDS) from alignment at H-elongata_contig14281:1479..5859-

>mRNA_H-elongata_contig14281.2961.1 ID=mRNA_H-elongata_contig14281.2961.1|Name=mRNA_H-elongata_contig14281.2961.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=4260bp|location=Sequence derived from alignment at H-elongata_contig14281:1479..5859- (Himanthalia elongata Himel1 dioecious)
ATGGCAGTAAGCACGGACAGTACAATAGCATCAGGCGAGCGGTCTTCCAT
AGATATCAGCGGCAGAACCAACTTCATCGACAACATGAGCGGCGGAAGTG
GCGGTGGCATGGCCTTATTGGATGGCAGTAAGCACGGACAGTACAATAGC
ATCAGGCGAGCGGTCTTCCATAGATATCAGCGGCAGAACCAACTTCATCG
ACAACATGAGCGGCGGAAGTGGCGGTGGCATGGCCTTATTGGCCACGGAC
GATGGCCCTAAGTTGGATGGCGTAAAATTTGTTTTGAACTCTGCTACTAG
CGATGGCGGAGGCGTGTATGCGACGGCGAGCAAAGTTACTATTGATGGTT
GTATCTTTGAATATAACATAGCAGAAGAAGCTGGAGGAGCTGTCAACAGT
GTCAATGGTATAGATGCGATCGTCAATACGAAGTTTCGTGGAAATACAGC
TCAGATGGGCGGGGCATTGGGGCTCTCTGGCACAGTTGAGATGACCAATT
GCTCGTTTTTGGAGAACGAATCGGACTTTAACGGCGGACCAGCTATTTAC
GTTATGATCGGCTCCGTATCAAAAATGGACAAATGCTCCTTCTCCGAAAA
TGTTTTCAATTGTGAAAATGGGACGTATTTTAGCTATAACGGGCCACGGA
CGATGGCCCTAAGTTGGATGGCGTAAAATTTGTTTTGAACTCTGCTACTA
GCGATGGCGGAGGCGTGTATGCGACGGCGAGCAAAGTTACTATTGATGGT
TGTATCTTTGAATATAACATAGCAGAAGAAGCTGGAGGAGCTGTCAACAG
TGTCAATGGTATAGATGCGATCGTCAATACGAAGTTTCGTGGAAATACAG
CTCAGATGGGCGGGGCATTGGGGCTCTCTGGCACAGTTGAGATGACCAAT
TGCTCGTTTTTGGAGAACGAATCGGACTTTAACGGCGGACCAGCTATTTA
CGTTATGATCGGCTCCGTATCAAAAATGGACAAATGCTCCTTCTCCGAAA
ATGTTTTCAATTGTGAAAATGGGACGTATTTTAGCTATAACGGGGAGGGA
AACATAGACGATATTATATGCAACGGATGTACCTGCGAGGGATGCATCCT
GTGCAATACTTGTCACTACGGTGAAGATAAAAATATCCCGACGTGTGAGC
CAGCCAAGGAGCATTCTGAGAGCTATGGTGGCACAATCGAAGACCTCGTG
ATCGATGAGGGGTATTGGCGGCCGACCAACGACAGTACCGACATTTTAGA
GTGCTACTACGCGAAAGCCTGTAATGGCGGGGTGACGGGCGCTGACGAGT
ATTGCGCACAAGGCTACGAAGGCGCATGAGGGAAACATAGACGATATTAT
ATGCAACGGATGTACCTGCGAGGGATGCATCCTGTGCAATACTTGTCACT
ACGGTGAAGATAAAAATATCCCGACGTGTGAGCCAGCCAAGGAGCATTCT
GAGAGCTATGGTGGCACAATCGAAGACCTCGTGATCGATGAGGGGTATTG
GCGGCCGACCAACGACAGTACCGACATTTTAGAGTGCTACTACGCGAAAG
CCTGTAATGGCGGGGTGACGGGCGCTGACGAGTATTGCGCACAAGGCTAC
GAAGGCGCATATTGCTCGGTTTGCTCGGAAAACTATGGTCCCGGTTTGGG
AAATACCTGCTCAAAATGCTCCGGCAGCACGGGTGGTATCGTGCTCGCCG
TTTTTCTCGGCACATTGGGTACAGCGATGGGAGTAATCCTTGCACTTCAC
CTAGTATCGGGAGCGGAGGGGGGACGAGGGCATAACCTTGTGTATCTTGC
CATGCGCATCATACCTATGCACACTTTAAAGATCATCATCGTTTGCTGGC
AGATTTTAACACAGATTGCTCGGTTTGCTCGGAAAACTATGGTCCCGGTT
TGGGAAATACCTGCTCAAAATGCTCCGGCAGCACGGGTGGTATCGTGCTC
GCCGTTTTTCTCGGCACATTGGGTACAGCGATGGGAGTAATCCTTGCACT
TCACCTAGTATCGGGAGCGGAGGGGGGACGAGGGCATAACCTTGTGTATC
TTGCCATGCGCATCATACCTATGCACACTTTAAAGATCATCATCGTTTGC
TGGCAGATTTTAACACAGTTTTCTGATGTGGCATACGTGACCTACCCAGA
ACTGTACCAGCGCTTCCTCGACGTGGTTGACGTGGTCAACTTCGATCTCA
GCTGGGCTGTCGCTGTTGAGTGTATCGTAGACGTCGATTTTCACAGCACA
TTGCTTGTCTCGACGTTGGCGCCTCTGTTTATATTGGGATTTCTGGCCTT
TACGTACTACGTCGCAGTGAGAAGGCACCGCCATCGGTCGGCAGTGGCTC
TTCGAAGTATCTGGCAAAAGCACCTATCAGTTGTGCTCTTTTTGACGTTT
TTGGTGTACTCGAGTGTTAGTTCTGTAATTTTTCAGATGTTTAATTGCGA
GAAACTTGACGACAGTAAAAACTATCTTCGGGCAGACTACAGCATCGAGT
GCGACTCTACGAAACATAGAGTTATGATGGTATATTCTGCCTGCATGATG
CTGCTGTATCCTGTAGGCATACCAGCCCTTTATGCATACCTGCTGTTTCA
CAAACGTGCTATTTTGGCCGATGGAGCTCGTCGGGAGACCGATGAGAGCG
TGCAGTTGACCATGGATTTGTGGAAACCATACAGGCCGGCTCGATTCTAC
TACGAGGTGATAGAATGCGGTCGAAGGCTGCTGCTAACAGGTGGAGTACT
TCTAGTTGAGGACGATACGTCAGCGCAGGTGGCTGCGATTTTGATGGTTG
CGGTAAGCTTTGCGATCCTACTAGAGATACTTGCCCCGTATGAATCACGC
ATTGACATCTGGGTTAGCCGCACAGGACACGCAGTAGTCTACGGAAGCAT
GTACTTCGCTCTTCTTCAGAAAACCGAAATCTCCAATGATACGCAAGCCA
GTCAAAAGGTTTTCGAGTGGGTACTTCTCACTACCCAAGTTTTGATGGTA
GCAGTCGTGGCAATTAACGCTGCCGTCTTGGCCTATTCATCAGTTGTTGA
AAAACGGATGGTCGATCGAGAAAGGGTAGCTCCCTTAGATGACTTTTCTG
ACCTAGAAGGATCGATTTGGCATGTTCGAACCCAACCGCGGGCTTGTTTG
AACCCTCGGCGGCAAGCTCGTATGGATGACCCTTCGTGATTTTCTGATGT
GGCATACGTGACCTACCCAGAACTGTACCAGCGCTTCCTCGACGTGGTTG
ACGTGGTCAACTTCGATCTCAGCTGGGCTGTCGCTGTTGAGTGTATCGTA
GACGTCGATTTTCACAGCACATTGCTTGTCTCGACGTTGGCGCCTCTGTT
TATATTGGGATTTCTGGCCTTTACGTACTACGTCGCAGTGAGAAGGCACC
GCCATCGGTCGGCAGTGGCTCTTCGAAGTATCTGGCAAAAGCACCTATCA
GTTGTGCTCTTTTTGACGTTTTTGGTGTACTCGAGTGTTAGTTCTGTAAT
TTTTCAGATGTTTAATTGCGAGAAACTTGACGACAGTAAAAACTATCTTC
GGGCAGACTACAGCATCGAGTGCGACTCTACGAAACATAGAGTTATGATG
GTATATTCTGCCTGCATGATGCTGCTGTATCCTGTAGGCATACCAGCCCT
TTATGCATACCTGCTGTTTCACAAACGTGCTATTTTGGCCGATGGAGCTC
GTCGGGAGACCGATGAGAGCGTGCAGTTGACCATGGATTTGTGGAAACCA
TACAGGCCGGCTCGATTCTACTACGAGGTGATAGAATGCGGTCGAAGGCT
GCTGCTAACAGGTGGAGTACTTCTAGTTGAGGACGATACGTCAGCGCAGG
TGGCTGCGATTTTGATGGTTGCGGTAAGCTTTGCGATCCTACTAGAGATA
CTTGCCCCGTATGAATCACGCATTGACATCTGGGTTAGCCGCACAGGACA
CGCAGTAGTCTACGGAAGCATGTACTTCGCTCTTCTTCAGAAAACCGAAA
TCTCCAATGATACGCAAGCCAGTCAAAAGGTTTTCGAGTGGGTACTTCTC
ACTACCCAAGTTTTGATGGTAGCAGTCGTGGCAATTAACGCTGCCGTCTT
GGCCTATTCATCAGTTGTTGAAAAACGGATGGTCGATCGAGAAAGGGTAG
CTCCCTTAGATGACTTTTCTGACCTAGAAGGATCGATTTGGCATGTTCGA
ACCCAACCGCGGGCTTGTTTGAACCCTCGGCGGCAAGCTCGTATGGATGA
CCCTTCGTGA
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