prot_H-elongata_contig142766.2957.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig142766.2957.1
Unique Nameprot_H-elongata_contig142766.2957.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length183
Homology
BLAST of mRNA_H-elongata_contig142766.2957.1 vs. uniprot
Match: D8LMX2_ECTSI (Plectin isoform 1 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LMX2_ECTSI)

HSP 1 Score: 231 bits (589), Expect = 6.330e-67
Identity = 130/167 (77.84%), Postives = 147/167 (88.02%), Query Frame = 0
Query:   17 LGDLTMARRREESLKAELTQATIRLEESGTELGKAQSRADDLAQARAADTESSADRAAREALVRRLDNERQYLKSQLESEITCKDELREALTTATRQLGEIKADWADEQTARTETFQRELQTKAETLSDINAEKVATETELVAATRQLSLLKVGYSKARDNLRAEQS 183
            LGDL+MARRREE+LKAE+     +LE+ GTEL KAQSRADDLA+ARAADTESSADRAAREA+VRRLDNERQYLKSQL++EITCKDELREAL  ATRQLG+IK DWADEQ +RT+ FQ+ELQ K + +SD+NAEKVA E ELVA TRQ+ LLK GYSKARDNLRAEQS
Sbjct: 1137 LGDLSMARRREEALKAEVAVMATKLEDRGTELAKAQSRADDLAEARAADTESSADRAAREAVVRRLDNERQYLKSQLQTEITCKDELREALAKATRQLGDIKVDWADEQASRTDEFQQELQAKTKAMSDLNAEKVAMEAELVAITRQVGLLKEGYSKARDNLRAEQS 1303          
BLAST of mRNA_H-elongata_contig142766.2957.1 vs. uniprot
Match: A0A835YVZ6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVZ6_9STRA)

HSP 1 Score: 128 bits (321), Expect = 6.380e-31
Identity = 83/179 (46.37%), Postives = 111/179 (62.01%), Query Frame = 0
Query:    5 KIQTLQDQLSDTLGDLTMARRREESLKAELTQATIRLEESGTELGKAQSRADDLAQARAADTESSADRAAREALVRRLDNERQYLKSQLESEITCKDELREALTTATRQLGEIKADWADEQTARTETFQRELQTKAETLSDINAEKVATETELVAATRQLSLLKVGYSKARDNLRAEQS 183
            +I TLQ+QLSD LG + +A+R+EE+ + ++  A  RLEE   ++ +A +RA+    A        A +AA EAL+RRLDNERQYL+SQLE+E+TCK EL+EAL  A RQL E+KA W  EQ    +     L       +D+ A   A   E   A  Q+ LLK GY+KARD LRAEQ+
Sbjct:   12 QITTLQEQLSDALGSVAVAKRKEEAARTDVAAAEQRLEEQAGDVARAVARAEAAEAAAXXXXXXXAGQAASEALLRRLDNERQYLRSQLETELTCKSELQEALDRAARQLAELKATWQREQDKAAQESGDALAALQRERADLAAANAALAAEASTAAHQVELLKSGYAKARDQLRAEQA 190          
BLAST of mRNA_H-elongata_contig142766.2957.1 vs. uniprot
Match: A0A7S2FJA7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FJA7_9STRA)

HSP 1 Score: 63.9 bits (154), Expect = 3.660e-10
Identity = 48/104 (46.15%), Postives = 66/104 (63.46%), Query Frame = 0
Query:   67 ESSADRAAREALVRRLDNERQYLKSQLESEITCKDELREALTTATRQLGEIKADWADEQTARTETFQREL------QTKAETLSDINAEKVATETELVAATRQL 164
            E+ A +AA EA++RRLDNER YL+SQL SE+T K+EL+  L  ATR LG++KA  + E+    E F+R+L      + K ET   +    +A ETE+   TRQL
Sbjct:    2 EARAAKAAAEAMLRRLDNERSYLRSQLTSEVTLKNELQVTLDQATRGLGDLKAQASRER----EEFERKLHGDGTERDKIETA--LRNSNLALETEVAEKTRQL 99          
BLAST of mRNA_H-elongata_contig142766.2957.1 vs. uniprot
Match: A0A7S3ZZB9_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZZB9_9STRA)

HSP 1 Score: 68.2 bits (165), Expect = 4.900e-10
Identity = 62/186 (33.33%), Postives = 90/186 (48.39%), Query Frame = 0
Query:    3 QSKIQTLQDQLSDTLGDLTMARRREESLKAELTQATIRLEESGTEL------GKAQSRADDLAQARAADTESSADRAAREALVRRLDNERQYLKSQLESEITCKDELREALTTATRQLGEIKADWADEQTARTETFQRELQTKAETLSDINAEKVATETELVAATRQLSLLKVGYSKARDNLRAEQ 182
            ++K+ + Q   SD + D   ARRREE +K EL     R E++  EL                             R   +AL+RRL+NE+QYL +QL+SE TCK EL+ AL  A  +L E +A          E+ ++     +    ++ A K   E + VA T+Q+ +LK  Y+K RD LR EQ
Sbjct:  654 ETKLASAQAAYSDAVHDAGAARRREEQIKGEL-----RREKAAKELRXXXXXXXXXXXXXXXXXXXXXXXXEDRQRQEEKALIRRLENEKQYLAAQLKSEATCKGELQSALDKAEERLVETEAQGHKALQNSLESVRKSADRASAAEKELRAVKTEKEAQDVALTKQIEMLKDAYTKTRDALRIEQ 834          
BLAST of mRNA_H-elongata_contig142766.2957.1 vs. uniprot
Match: A0A7S3M992_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M992_9STRA)

HSP 1 Score: 58.9 bits (141), Expect = 1.420e-7
Identity = 42/122 (34.43%), Postives = 61/122 (50.00%), Query Frame = 0
Query:   76 EALVRRLDNERQYLKSQLESEITCKDELREALTTATRQLGEIKADWADEQTARTETFQRELQTKAETLSDINAEKVAT---------------ETELVAATRQLSLLKVGYSKARDNLRAEQ 182
            +A++RRLDNERQYLKSQL SE+T K EL+ A +   +QL +++  W ++                ETL D+N +   T               ++E+     Q   LK G+ K RD +R EQ
Sbjct:   45 DAVIRRLDNERQYLKSQLASEVTHKSELQAAFSQCQQQLNDVQKQWKND---------------VETLKDLNIQATHTFADKEQKYLQLQSQLDSEVKRCQTQNRELKEGFMKMRDQVRMEQ 151          
BLAST of mRNA_H-elongata_contig142766.2957.1 vs. uniprot
Match: A0A1W0A416_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A416_9STRA)

HSP 1 Score: 57.0 bits (136), Expect = 3.380e-6
Identity = 60/187 (32.09%), Postives = 96/187 (51.34%), Query Frame = 0
Query:    3 QSKIQTLQDQLSDTLGDLTMARRREESLKA---ELTQATIRLEESGTELGKAQSRADDLAQARAADTESSADRAAR---EALVRRLDNERQYLKSQLESEITCKDELREALTTATRQLGEIKADWADEQTARTETFQRELQTKAETLSDINAEKVATETELVAATRQLSLLKVGYSKARDNLRAEQS 183
            QSK+  LQ  ++D + DL+ AR +E++ K    ++ +   RL +   EL  +     +        T+SS D A R   EA +RRL +ERQYLKSQ+E E  CKDEL+  L   T QL + + +   E +A  ++ + +  T    ++ +    V T  EL +   Q +  K+   KAR+   A+Q+
Sbjct:  783 QSKVVQLQANITDLVSDLSAARNKEDNAKLSTEKMAEENARLYKRIAELELSNEELTETING----TKSSLDDANRANLEATLRRLTHERQYLKSQMEGEARCKDELQLRLQEITAQLQDSQNNAKTELSAFKQSSKDKEITLQAQIAKLEECNVLTVGELSSVKHQWNEAKLALYKARERNDADQT 965          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig142766.2957.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D8LMX2_ECTSI6.330e-6777.84Plectin isoform 1 n=2 Tax=Ectocarpus TaxID=2879 Re... [more]
A0A835YVZ6_9STRA6.380e-3146.37Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2FJA7_9STRA3.660e-1046.15Hypothetical protein (Fragment) n=1 Tax=Florenciel... [more]
A0A7S3ZZB9_9STRA4.900e-1033.33Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7S3M992_9STRA1.420e-734.43Hypothetical protein (Fragment) n=1 Tax=Spumella e... [more]
A0A1W0A416_9STRA3.380e-632.09Uncharacterized protein n=1 Tax=Thraustotheca clav... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 100..120

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig142766contigH-elongata_contig142766:117..1437 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig142766.2957.1mRNA_H-elongata_contig142766.2957.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig142766 117..1437 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig142766.2957.1 ID=prot_H-elongata_contig142766.2957.1|Name=mRNA_H-elongata_contig142766.2957.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=183bp
RAQSKIQTLQDQLSDTLGDLTMARRREESLKAELTQATIRLEESGTELGK
AQSRADDLAQARAADTESSADRAAREALVRRLDNERQYLKSQLESEITCK
DELREALTTATRQLGEIKADWADEQTARTETFQRELQTKAETLSDINAEK
VATETELVAATRQLSLLKVGYSKARDNLRAEQS
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