prot_H-elongata_contig142609.2947.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig142609.2947.1
Unique Name	prot_H-elongata_contig142609.2947.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	58

Homology

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BLAST of mRNA_H-elongata_contig142609.2947.1 vs. uniprot
Match: D7FW40_ECTSI (GMC_OxRdtase_N domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FW40_ECTSI)

HSP 1 Score: 90.9 bits (224), Expect = 6.010e-20
Identity = 39/43 (90.70%), Postives = 41/43 (95.35%), Query Frame = 0

Query:   13 QVLGGSSCTNVMLYHRGEKADYDAWGVKGWAGKDVLPYFKKAE 55
            +VLGGSSCTNVMLYHRGE+ADYDAWGV GW GKDVLPYFKKAE
Sbjct:  139 KVLGGSSCTNVMLYHRGEEADYDAWGVDGWKGKDVLPYFKKAE 181

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BLAST of mRNA_H-elongata_contig142609.2947.1 vs. uniprot
Match: A0A7S2Z4L9_9CHLO (Hypothetical protein n=1 Tax=Chloropicon laureae TaxID=464258 RepID=A0A7S2Z4L9_9CHLO)

HSP 1 Score: 73.2 bits (178), Expect = 1.030e-13
Identity = 31/45 (68.89%), Postives = 36/45 (80.00%), Query Frame = 0

Query:   13 QVLGGSSCTNVMLYHRGEKADYDAWGVKGWAGKDVLPYFKKAEVS 57
            +VLGGSSCTNV+LY+RG   D+D W V GWA KDVL YFKKAE +
Sbjct:   92 KVLGGSSCTNVLLYNRGSAGDFDKWKVPGWASKDVLEYFKKAETN 136

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BLAST of mRNA_H-elongata_contig142609.2947.1 vs. uniprot
Match: A0A699YBT2_HAELA (GMC_OxRdtase_N domain-containing protein (Fragment) n=1 Tax=Haematococcus lacustris TaxID=44745 RepID=A0A699YBT2_HAELA)

HSP 1 Score: 65.5 bits (158), Expect = 6.300e-13
Identity = 25/43 (58.14%), Postives = 33/43 (76.74%), Query Frame = 0

Query:   13 QVLGGSSCTNVMLYHRGEKADYDAWGVKGWAGKDVLPYFKKAE 55
            + LGGSSCTN  LYHRG  ADYD+WG++GW  +D++ +F  AE
Sbjct:    7 KALGGSSCTNATLYHRGSPADYDSWGLEGWKARDLVDWFISAE 49

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BLAST of mRNA_H-elongata_contig142609.2947.1 vs. uniprot
Match: A0A5B8MG93_9CHLO (Glucose-methanol-choline oxidoreductase n=1 Tax=Chloropicon primus TaxID=1764295 RepID=A0A5B8MG93_9CHLO)

HSP 1 Score: 70.9 bits (172), Expect = 6.680e-13
Identity = 29/43 (67.44%), Postives = 35/43 (81.40%), Query Frame = 0

Query:   13 QVLGGSSCTNVMLYHRGEKADYDAWGVKGWAGKDVLPYFKKAE 55
            +VLGGSSCTNV+LY+RG   DYD W V GW+ +DVL YFKK+E
Sbjct:  130 KVLGGSSCTNVLLYNRGSARDYDGWKVPGWSSRDVLQYFKKSE 172

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BLAST of mRNA_H-elongata_contig142609.2947.1 vs. uniprot
Match: A0A7S2KXY0_9STRA (Hypothetical protein n=2 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KXY0_9STRA)

HSP 1 Score: 70.1 bits (170), Expect = 1.250e-12
Identity = 30/43 (69.77%), Postives = 34/43 (79.07%), Query Frame = 0

Query:   13 QVLGGSSCTNVMLYHRGEKADYDAWGVKGWAGKDVLPYFKKAE 55
            +VLGGSSCTNVML+HRG   DYD W V GWA  DVLP+FK +E
Sbjct:  103 KVLGGSSCTNVMLHHRGTAKDYDDWCVPGWAAADVLPWFKASE 145

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BLAST of mRNA_H-elongata_contig142609.2947.1 vs. uniprot
Match: A0A7Y6PXK7_9DELT (Uncharacterized protein n=1 Tax=Kofleriaceae bacterium TaxID=2212474 RepID=A0A7Y6PXK7_9DELT)

HSP 1 Score: 69.7 bits (169), Expect = 1.700e-12
Identity = 28/43 (65.12%), Postives = 36/43 (83.72%), Query Frame = 0

Query:   13 QVLGGSSCTNVMLYHRGEKADYDAWGVKGWAGKDVLPYFKKAE 55
            +VLGG+SC N M+Y RG +A+YDAWG+ GWA  DVLPYFK++E
Sbjct:   83 KVLGGTSCLNAMVYIRGNRANYDAWGMPGWAYADVLPYFKRSE 125

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BLAST of mRNA_H-elongata_contig142609.2947.1 vs. uniprot
Match: A0A7S4EP26_9STRA (Hypothetical protein n=2 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4EP26_9STRA)

HSP 1 Score: 69.3 bits (168), Expect = 2.330e-12
Identity = 27/43 (62.79%), Postives = 33/43 (76.74%), Query Frame = 0

Query:   13 QVLGGSSCTNVMLYHRGEKADYDAWGVKGWAGKDVLPYFKKAE 55
            +VLGGSSCTNV L+HRG   DYD WG+ GW   DVLP+FK ++
Sbjct:  125 KVLGGSSCTNVCLHHRGSAQDYDDWGIPGWTASDVLPFFKASQ 167

[Close]

BLAST of mRNA_H-elongata_contig142609.2947.1 vs. uniprot
Match: A0A1E7FBP9_9STRA (Glucose-methanol-choline oxidoreductase (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FBP9_9STRA)

HSP 1 Score: 68.9 bits (167), Expect = 3.180e-12
Identity = 28/43 (65.12%), Postives = 33/43 (76.74%), Query Frame = 0

Query:   13 QVLGGSSCTNVMLYHRGEKADYDAWGVKGWAGKDVLPYFKKAE 55
            +VLGGSSCTNV L+HRG   DYD WGV GW   DVLP+FK ++
Sbjct:   79 KVLGGSSCTNVCLHHRGSAQDYDDWGVPGWKAADVLPFFKASQ 121

[Close]

BLAST of mRNA_H-elongata_contig142609.2947.1 vs. uniprot
Match: A0A448ZTH3_9STRA (GMC_OxRdtase_N domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZTH3_9STRA)

HSP 1 Score: 68.9 bits (167), Expect = 3.180e-12
Identity = 27/43 (62.79%), Postives = 33/43 (76.74%), Query Frame = 0

Query:   13 QVLGGSSCTNVMLYHRGEKADYDAWGVKGWAGKDVLPYFKKAE 55
            +VLGGSSCTNV L+HRG   DYD WG+ GW   DVLP+FK ++
Sbjct:  125 KVLGGSSCTNVCLHHRGSAQDYDDWGIPGWKASDVLPFFKASQ 167

[Close]

BLAST of mRNA_H-elongata_contig142609.2947.1 vs. uniprot
Match: R1FBM9_EMIHU (Choline dehydrogenase n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1FBM9_EMIHU)

HSP 1 Score: 68.6 bits (166), Expect = 4.350e-12
Identity = 30/46 (65.22%), Postives = 34/46 (73.91%), Query Frame = 0

Query:   13 QVLGGSSCTNVMLYHRGEKADYDAW---GVKGWAGKDVLPYFKKAE 55
            + LGGSS TNVMLYHRG  ADYDAW   G +GW  KDVLPY+ + E
Sbjct:  131 KALGGSSVTNVMLYHRGSPADYDAWEEAGARGWGAKDVLPYYLRVE 176

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig142609.2947.1 vs. uniprot

BLAST of mRNA_H-elongata_contig142609.2947.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7FW40_ECTSI	6.010e-20	90.70	GMC_OxRdtase_N domain-containing protein n=1 Tax=E...	[more]
A0A7S2Z4L9_9CHLO	1.030e-13	68.89	Hypothetical protein n=1 Tax=Chloropicon laureae T...	[more]
A0A699YBT2_HAELA	6.300e-13	58.14	GMC_OxRdtase_N domain-containing protein (Fragment...	[more]
A0A5B8MG93_9CHLO	6.680e-13	67.44	Glucose-methanol-choline oxidoreductase n=1 Tax=Ch...	[more]
A0A7S2KXY0_9STRA	1.250e-12	69.77	Hypothetical protein n=2 Tax=Leptocylindrus danicu...	[more]
A0A7Y6PXK7_9DELT	1.700e-12	65.12	Uncharacterized protein n=1 Tax=Kofleriaceae bacte...	[more]
A0A7S4EP26_9STRA	2.330e-12	62.79	Hypothetical protein n=2 Tax=Pseudo-nitzschia aust...	[more]
A0A1E7FBP9_9STRA	3.180e-12	65.12	Glucose-methanol-choline oxidoreductase (Fragment)...	[more]
A0A448ZTH3_9STRA	3.180e-12	62.79	GMC_OxRdtase_N domain-containing protein n=1 Tax=P...	[more]
R1FBM9_EMIHU	4.350e-12	65.22	Choline dehydrogenase n=1 Tax=Emiliania huxleyi Ta...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036188	FAD/NAD(P)-binding domain superfamily	GENE3D	3.50.50.60		coord: 1..58 e-value: 1.5E-14 score: 55.8
IPR036188	FAD/NAD(P)-binding domain superfamily	SUPERFAMILY	51905	FAD/NAD(P)-binding domain	coord: 10..55
IPR000172	Glucose-methanol-choline oxidoreductase, N-terminal	PFAM	PF00732	GMC_oxred_N	coord: 13..55 e-value: 9.1E-10 score: 38.4
None	No IPR available	PANTHER	PTHR11552	GLUCOSE-METHANOL-CHOLINE GMC OXIDOREDUCTASE	coord: 10..55
None	No IPR available	PANTHER	PTHR11552:SF198		coord: 10..55

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig142609	contig	H-elongata_contig142609:1282..1455 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig142609.2947.1	mRNA_H-elongata_contig142609.2947.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig142609 1282..1455 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig142609.2947.1 ID=prot_H-elongata_contig142609.2947.1|Name=mRNA_H-elongata_contig142609.2947.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=58bp
NRSTYSVLSSQKQVLGGSSCTNVMLYHRGEKADYDAWGVKGWAGKDVLPY
FKKAEVSP

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR036188	FAD/NAD-bd_sf
IPR000172	GMC_OxRdtase_N