mRNA_H-elongata_contig142577.2945.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig142577.2945.1 vs. uniprot
Match: A0A6H5JC99_9PHAE (SET domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JC99_9PHAE) HSP 1 Score: 205 bits (521), Expect = 4.600e-59 Identity = 99/159 (62.26%), Postives = 122/159 (76.73%), Query Frame = 1
Query: 10 EQNFTDWLRENGAEFSSVGWPSRQTTSGLRGAVAQRDITTGEYMVVIPHHLMLSEFHARADPDTGHVYKEKARLLKSDNGLAVYIMQEMIKGKSSFYWPYLRMLPVPSNLRHWSEPDLLELQEPRLSRRAVSRARQLRALYRETMEVLSSTYPRLFPVS 486
EQ F WLR +GA V WPS +T SG+RGAVA+RDI G++MV+IPH LM+SEFHA+ADP GHV++ RLL SDNGLA+YIMQE++K + SFYWPYLRMLP P NLR+W+ LL LQ+ +L RR +R RQL ALYRET+E LSS+YP L+ VS
Sbjct: 20 EQEFLRWLRSHGAVIDCVEWPSSETESGVRGAVARRDIAPGDHMVIIPHALMMSEFHAKADPKYGHVHRLNTRLLGSDNGLALYIMQEILKEERSFYWPYLRMLPTPCNLRNWNRESLLLLQDHKLVRRTAARGRQLLALYRETIEFLSSSYPDLYTVS 178
BLAST of mRNA_H-elongata_contig142577.2945.1 vs. uniprot
Match: D7G8K1_ECTSI (SET domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8K1_ECTSI) HSP 1 Score: 204 bits (518), Expect = 8.760e-59 Identity = 97/156 (62.18%), Postives = 121/156 (77.56%), Query Frame = 1
Query: 10 EQNFTDWLRENGAEFSSVGWPSRQTTSGLRGAVAQRDITTGEYMVVIPHHLMLSEFHARADPDTGHVYKEKARLLKSDNGLAVYIMQEMIKGKSSFYWPYLRMLPVPSNLRHWSEPDLLELQEPRLSRRAVSRARQLRALYRETMEVLSSTYPRLF 477
EQ F WLR +GA V WPS +T SG+RGAVA+RDI G++MV+IPH LM+SEFHA+ADP GHV++ RLL SDNGLA+YIMQE++K + SFYWPYLRMLP P NLR+W+ LL LQ+ +L RR +R+RQL ALYRET+E LSS+YP L+
Sbjct: 20 EQEFLRWLRSHGAAIDCVEWPSSETESGVRGAVARRDIAPGDHMVIIPHALMMSEFHAKADPKYGHVHRLNTRLLGSDNGLALYIMQEILKEERSFYWPYLRMLPTPCNLRNWNRESLLLLQDHKLVRRTAARSRQLLALYRETIEFLSSSYPELY 175
BLAST of mRNA_H-elongata_contig142577.2945.1 vs. uniprot
Match: A0A836CPE3_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CPE3_9STRA) HSP 1 Score: 128 bits (321), Expect = 1.990e-33 Identity = 65/155 (41.94%), Postives = 92/155 (59.35%), Query Frame = 1
Query: 19 FTDWLRENGAEFSSVGWPSRQTTSGLRGAVAQRDITTGEYMVVIPHHLMLSEFHARADPDTGHVYKEKAR-LLKSDNGLAVYIMQEMIKGKSSFYWPYLRMLPVPSNLRHWSEPDLLELQEPRLSRRAVSRARQLRALYRETMEVLSSTYPRLFP 480
F WLRENGA + + WPS T SG RGA+A DI GE + +P ML+ A+ P G V+ +A LL+ D LA+Y+M E+++G +SFY PYL +LP P W + LQ+ RL+ A +R+RQL + TM L+++YP +FP
Sbjct: 2 FLQWLRENGATWDKLEWPSYATASGSRGAIATADIAPGEPFLCVPERCMLTPPQAQRLPCVGPVFAAEAEGLLRGDAALALYVMHELLRGDASFYAPYLAVLPAPHTAEDWDATAVAVLQDERLAASADARSRQLTRAWERTMSALAASYPGMFP 156
BLAST of mRNA_H-elongata_contig142577.2945.1 vs. uniprot
Match: A0A225UT02_9STRA (SET domain-containing protein (Fragment) n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225UT02_9STRA) HSP 1 Score: 118 bits (296), Expect = 5.340e-30 Identity = 62/159 (38.99%), Postives = 90/159 (56.60%), Query Frame = 1
Query: 7 VEQNFTDWLRENGAEFSSVGWPSRQTTSGLRGAVAQRDITTGEYMVVIPHHLMLSEFHARADPDTGHVYKEKARLLKSDNG-LAVYIMQEMIKGKSSFYWPYLRMLPVPSNLRHWSEPDLLELQEPRLSRRAVSRARQLRALYRETMEVLSSTYPRLFP 480
EQ F WLR+NGA F + WP+ T +GLRGAVA DI T E M+ +P L++SE DP VY++ + D+ L ++IM+E++ G+ SF+ PYL +LP P +++ W +L EL + RL A R+ ++ Y M L YP FP
Sbjct: 4 AEQRFLQWLRDNGATFPKLQWPTT-TPNGLRGAVALEDIATDEPMICVPRSLLISEHLCWQDPQLQCVYRDNRDVFTRDDPVLTLFIMRELVLGERSFFHPYLSILPYPESVQDWDVDELRELHDDRLVAAAARRSSEINVYYDRVMTRLQQKYPGEFP 161
BLAST of mRNA_H-elongata_contig142577.2945.1 vs. uniprot
Match: A0A225UML7_9STRA (SET domain-containing protein (Fragment) n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225UML7_9STRA) HSP 1 Score: 119 bits (297), Expect = 5.550e-29 Identity = 62/159 (38.99%), Postives = 91/159 (57.23%), Query Frame = 1
Query: 7 VEQNFTDWLRENGAEFSSVGWPSRQTTSGLRGAVAQRDITTGEYMVVIPHHLMLSEFHARADPDTGHVYKEKARLLKSDNG-LAVYIMQEMIKGKSSFYWPYLRMLPVPSNLRHWSEPDLLELQEPRLSRRAVSRARQLRALYRETMEVLSSTYPRLFP 480
EQ F WLR+NGA F + WP+ T +GLRGAVA DI T E M+ +P L++SE DP VY++ + D+ L ++IM+E++ G+ SF+ PYL +LP P +++ W+ +L EL + RL A R+ ++ Y M L YP FP
Sbjct: 11 AEQRFLQWLRDNGATFPKLQWPTT-TPNGLRGAVALEDIATDEPMICVPRSLLISEHLCWQDPQLQCVYRDNRDVFTRDDPVLTLFIMRELVLGERSFFHPYLSILPYPESVQDWNVDELRELHDDRLVAAAARRSSEINVYYDRVMTRLQQKYPGEFP 168
BLAST of mRNA_H-elongata_contig142577.2945.1 vs. uniprot
Match: W2Z914_PHYPR (SET domain-containing protein n=1 Tax=Phytophthora parasitica P10297 TaxID=1317064 RepID=W2Z914_PHYPR) HSP 1 Score: 116 bits (290), Expect = 7.000e-28 Identity = 62/159 (38.99%), Postives = 93/159 (58.49%), Query Frame = 1
Query: 7 VEQNFTDWLRENGAEFSSVGWPSRQTTSGLRGAVAQRDITTGEYMVVIPHHLMLSEFHARADPDTGHVYKEKARLLKSDNG-LAVYIMQEMIKGKSSFYWPYLRMLPVPSNLRHWSEPDLLELQEPRLSRRAVSRARQLRALYRETMEVLSSTYPRLFP 480
E F WLR+NGA F + WP T +GLRGAVA ITTGE M+ IP L++SE DP G V+++ + D+ +A++I++E++ +SSF+ PYL +LP P +++ W+ +L EL + RL A R+ ++ YR + L YP FP
Sbjct: 4 AELRFLQWLRDNGATFPKLEWPVT-TPNGLRGAVATETITTGEPMLCIPRRLLISEELCWQDPQLGPVFRDNRDVFTRDDPVMALFIVRELLLKESSFFHPYLSILPYPESVQDWTHDELHELYDERLVDAAARRSSEVSIYYRRVLTRLQEKYPGEFP 161
BLAST of mRNA_H-elongata_contig142577.2945.1 vs. uniprot
Match: A0A2R5GWH5_9STRA (Histone-lysine N-methyltransferase setd3 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GWH5_9STRA) HSP 1 Score: 116 bits (290), Expect = 2.230e-27 Identity = 67/160 (41.88%), Postives = 91/160 (56.88%), Query Frame = 1
Query: 1 DEVEQNFTDWLRENGAEFSSVGWPSRQTTSGLRGAVAQRDITTGEYMVVIPHHLMLSEFHARADPDTGHVYKEKARLLKSDNGL--AVYIMQEMIKGKSSFYWPYLRMLPVPSNLRHWSEPDLLELQEPRLSRRAVSRARQLRALYRETMEV--LSSTYP 468
+E E F WLRENGA + WPSR TTSG+RG VA +DI +GE M+ IP +++ A VY + R +SD+ L AV++M E ++GK SF++PYL +LP P + WS + LELQ+ L A R L+ LY + E LS YP
Sbjct: 24 EEREFAFLQWLRENGAMIDKLEWPSRATTSGVRGTVALQDIESGEPMLEIPQKMIIYPAVCLACEALQPVYHARWRFFQSDDDLIIAVFLMHERLQGKDSFWFPYLEVLPTPGGIGEWSHEEQLELQDRDLVAEARRRPGALKRLYSQVQEAIELSGLYP 183
BLAST of mRNA_H-elongata_contig142577.2945.1 vs. uniprot
Match: W2Q7U8_PHYPN (SET domain-containing protein n=8 Tax=Phytophthora TaxID=4783 RepID=W2Q7U8_PHYPN) HSP 1 Score: 115 bits (287), Expect = 3.050e-27 Identity = 62/159 (38.99%), Postives = 92/159 (57.86%), Query Frame = 1
Query: 7 VEQNFTDWLRENGAEFSSVGWPSRQTTSGLRGAVAQRDITTGEYMVVIPHHLMLSEFHARADPDTGHVYKEKARLLKSDNGLAV-YIMQEMIKGKSSFYWPYLRMLPVPSNLRHWSEPDLLELQEPRLSRRAVSRARQLRALYRETMEVLSSTYPRLFP 480
E F WLR+NGA F + WP T +GLRGAVA ITTGE M+ IP L++SE DP G V+++ + D+ + V +I++E++ +SSF+ PYL +LP P +++ W+ +L EL + RL A R+ ++ YR + L YP FP
Sbjct: 4 AELRFLQWLRDNGATFPKLEWPVT-TPNGLRGAVATETITTGEPMLCIPRRLLISEELCWQDPQLGPVFRDNRDVFTRDDPVMVLFIVRELLLKESSFFHPYLSILPYPESVQDWTHDELHELYDERLVDAAARRSSEVSIYYRRVLTRLQEKYPGEFP 161
BLAST of mRNA_H-elongata_contig142577.2945.1 vs. uniprot
Match: K3X8I1_GLOUD (SET domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X8I1_GLOUD) HSP 1 Score: 92.4 bits (228), Expect = 2.660e-19 Identity = 50/139 (35.97%), Postives = 78/139 (56.12%), Query Frame = 1
Query: 67 WPSRQTTSGLRGAVAQRDITTGEYMVVIPHHLMLSEFHARADPDTGHVYKEKARLLKSDNG-LAVYIMQEMIKGKSSFYWPYLRMLPVPSNLRHWSEPDLLELQEPRLSRRAVSRARQLRALYRETMEVLSSTYPRLFP 480
WP T +GLRG V DI T E M+ IP L++SE DP + + + D+ LA++++QEM++G SF+ PYL +LP P +++ WS+ +L EL++ RL A R ++ Y +L + YP +FP
Sbjct: 16 WPV-VTENGLRGVVTLEDIATNEPMLQIPEKLVISERRCWEDPRLKDILEANRDVFSRDDPVLALFLVQEMLRGDDSFFEPYLSILPYPESIQDWSDDELAELRDRRLVDAAKRRRSEIDTFYDRVFTLLDTKYPGVFP 153
BLAST of mRNA_H-elongata_contig142577.2945.1 vs. uniprot
Match: A0A2D4CAI0_PYTIN (SET domain-containing protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CAI0_PYTIN) HSP 1 Score: 66.6 bits (161), Expect = 2.430e-10 Identity = 37/110 (33.64%), Postives = 60/110 (54.55%), Query Frame = 1
Query: 163 MLSEFHARADPDTGHVYKEKARLLKSDNG-LAVYIMQEMIKGKSSFYWPYLRMLPVPSNLRHWSEPDLLELQEPRLSRRAVSRARQLRALYRETMEVLSSTYPRLFPVSA 489
M+S +DP+ G VY E + D+ LA+++ +E+ KG +SFY PYL +LP N++ W++ + EL++ L A R ++ Y M L + YP FP S+
Sbjct: 1 MISXETCWSDPELGPVYDENRDVFTRDDPVLALFLTRELAKGDTSFYAPYLSILPEVVNVQDWTDDERAELRDRTLEDAAERRINEVATFYERIMHRLEAKYPGRFPRSS 110 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig142577.2945.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 16
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig142577.2945.1 >prot_H-elongata_contig142577.2945.1 ID=prot_H-elongata_contig142577.2945.1|Name=mRNA_H-elongata_contig142577.2945.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=169bp DEVEQNFTDWLRENGAEFSSVGWPSRQTTSGLRGAVAQRDITTGEYMVVIback to top mRNA from alignment at H-elongata_contig142577:467..1355+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig142577.2945.1 ID=mRNA_H-elongata_contig142577.2945.1|Name=mRNA_H-elongata_contig142577.2945.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=889bp|location=Sequence derived from alignment at H-elongata_contig142577:467..1355+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig142577:467..1355+ >mRNA_H-elongata_contig142577.2945.1 ID=mRNA_H-elongata_contig142577.2945.1|Name=mRNA_H-elongata_contig142577.2945.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1014bp|location=Sequence derived from alignment at H-elongata_contig142577:467..1355+ (Himanthalia elongata Himel1 dioecious)back to top |