prot_H-elongata_contig142432.2936.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig142432.2936.1
Unique Nameprot_H-elongata_contig142432.2936.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length46
Homology
BLAST of mRNA_H-elongata_contig142432.2936.1 vs. uniprot
Match: A0A6H5JBD2_9PHAE (Superoxide dismutase [Fe] n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBD2_9PHAE)

HSP 1 Score: 82.4 bits (202), Expect = 9.910e-18
Identity = 34/46 (73.91%), Postives = 40/46 (86.96%), Query Frame = 0
Query:    1 WAFLYYDSEEKNLDVVVTENDDTPAMNPKTTPVLVLDLWEHSYYLD 46
            W FLY++ EEK LDVVV E +DTPAMNP TTP+L+LDLWEH+YYLD
Sbjct:  174 WVFLYFNHEEKTLDVVVLEYEDTPAMNPNTTPILLLDLWEHAYYLD 219          
BLAST of mRNA_H-elongata_contig142432.2936.1 vs. uniprot
Match: A0A836CJJ6_9STRA (Superoxide dismutase [Fe] n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJJ6_9STRA)

HSP 1 Score: 61.6 bits (148), Expect = 5.020e-10
Identity = 22/45 (48.89%), Postives = 34/45 (75.56%), Query Frame = 0
Query:    1 WAFLYYDSEEKNLDVVVTENDDTPAMNPKTTPVLVLDLWEHSYYL 45
            W FLY++ + + L++  T   DTPAM+P+  P+L+LD+WEH+YYL
Sbjct:  165 WTFLYFNKKARTLEITNTAGHDTPAMDPEKAPLLLLDMWEHAYYL 209          
BLAST of mRNA_H-elongata_contig142432.2936.1 vs. uniprot
Match: A0A2P8R3N0_9PROT (Superoxide dismutase n=1 Tax=Campylobacter blaseri TaxID=2042961 RepID=A0A2P8R3N0_9PROT)

HSP 1 Score: 57.4 bits (137), Expect = 1.170e-8
Identity = 24/46 (52.17%), Postives = 32/46 (69.57%), Query Frame = 0
Query:    1 WAFLYYDSEEKNLDVVVTENDDTPAMNPKTTPVLVLDLWEHSYYLD 46
            W +L YD E K L+++ T N DTP    K  P+LV+D+WEH+YYLD
Sbjct:  116 WCWLTYDPETKKLEIIQTSNADTPVTQNKV-PLLVVDVWEHAYYLD 160          
BLAST of mRNA_H-elongata_contig142432.2936.1 vs. uniprot
Match: A0A268TZC1_9HELI (Superoxide dismutase n=1 Tax=Helicobacter sp. 13S00401-1 TaxID=1905758 RepID=A0A268TZC1_9HELI)

HSP 1 Score: 54.3 bits (129), Expect = 1.750e-7
Identity = 23/46 (50.00%), Postives = 32/46 (69.57%), Query Frame = 0
Query:    1 WAFLYYDSEEKNLDVVVTENDDTPAMNPKTTPVLVLDLWEHSYYLD 46
            W +L Y+ E K+L++V T N  TP    K  P+LV+D+WEHSYY+D
Sbjct:  130 WTWLVYNLESKSLEIVQTSNAQTPIKEHKV-PLLVVDVWEHSYYID 174          
BLAST of mRNA_H-elongata_contig142432.2936.1 vs. uniprot
Match: A0A650EM98_9HELI (Superoxide dismutase n=2 Tax=Helicobacter TaxID=209 RepID=A0A650EM98_9HELI)

HSP 1 Score: 53.9 bits (128), Expect = 2.110e-7
Identity = 23/46 (50.00%), Postives = 32/46 (69.57%), Query Frame = 0
Query:    1 WAFLYYDSEEKNLDVVVTENDDTPAMNPKTTPVLVLDLWEHSYYLD 46
            W +L YD + K L++V T N  TPA   K  P+LV+D+WEH+YY+D
Sbjct:  121 WNWLVYDVKNKKLEIVQTSNAATPATESKV-PLLVVDVWEHAYYID 165          
BLAST of mRNA_H-elongata_contig142432.2936.1 vs. uniprot
Match: I7GZ20_9HELI (Superoxide dismutase n=10 Tax=Helicobacter TaxID=209 RepID=I7GZ20_9HELI)

HSP 1 Score: 53.9 bits (128), Expect = 2.230e-7
Identity = 22/46 (47.83%), Postives = 34/46 (73.91%), Query Frame = 0
Query:    1 WAFLYYDSEEKNLDVVVTENDDTPAMNPKTTPVLVLDLWEHSYYLD 46
            W +L Y+++ K L++V T N  TPA + K  P+LV+D+WEH+YY+D
Sbjct:  121 WNWLVYNTQNKKLEIVQTSNAATPATDSKV-PLLVVDVWEHAYYID 165          
BLAST of mRNA_H-elongata_contig142432.2936.1 vs. uniprot
Match: A0A6L5WGD3_9PROT (Superoxide dismutase n=1 Tax=Campylobacter portucalensis TaxID=2608384 RepID=A0A6L5WGD3_9PROT)

HSP 1 Score: 53.9 bits (128), Expect = 2.310e-7
Identity = 22/46 (47.83%), Postives = 33/46 (71.74%), Query Frame = 0
Query:    1 WAFLYYDSEEKNLDVVVTENDDTPAMNPKTTPVLVLDLWEHSYYLD 46
            W +L Y+ + KNL+++ T N  TP  + K  P+LV+D+WEH+YYLD
Sbjct:  116 WCWLVYNPKNKNLEIIQTSNAATPVTDNKI-PLLVVDVWEHAYYLD 160          
BLAST of mRNA_H-elongata_contig142432.2936.1 vs. uniprot
Match: A0A6G5QIY2_9PROT (Superoxide dismutase n=5 Tax=Campylobacter mucosalis TaxID=202 RepID=A0A6G5QIY2_9PROT)

HSP 1 Score: 53.9 bits (128), Expect = 2.310e-7
Identity = 23/46 (50.00%), Postives = 32/46 (69.57%), Query Frame = 0
Query:    1 WAFLYYDSEEKNLDVVVTENDDTPAMNPKTTPVLVLDLWEHSYYLD 46
            WA+L YD   K L++V T N  TP  + K  P+LV+D+WEH+YY+D
Sbjct:  116 WAWLVYDPSAKKLEIVQTSNAATPVNDGKV-PLLVVDVWEHAYYID 160          
BLAST of mRNA_H-elongata_contig142432.2936.1 vs. uniprot
Match: UPI001BA13580 (superoxide dismutase n=1 Tax=Campylobacter anatolicus TaxID=2829105 RepID=UPI001BA13580)

HSP 1 Score: 53.9 bits (128), Expect = 2.310e-7
Identity = 22/46 (47.83%), Postives = 32/46 (69.57%), Query Frame = 0
Query:    1 WAFLYYDSEEKNLDVVVTENDDTPAMNPKTTPVLVLDLWEHSYYLD 46
            W +L +D + K L++V T N  TP  N K  P+LV+D+WEH+YY+D
Sbjct:  116 WCWLVFDPDSKKLEIVQTSNAVTPVTNGKV-PLLVVDVWEHAYYID 160          
BLAST of mRNA_H-elongata_contig142432.2936.1 vs. uniprot
Match: A0A7S2Y0M5_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y0M5_9STRA)

HSP 1 Score: 52.0 bits (123), Expect = 3.540e-7
Identity = 18/45 (40.00%), Postives = 30/45 (66.67%), Query Frame = 0
Query:    1 WAFLYYDSEEKNLDVVVTENDDTPAMNPKTTPVLVLDLWEHSYYL 45
            W +L Y++   + ++V T N D+P M     P++V+D+WEH+YYL
Sbjct:   40 WTWLVYNTSHNSFEIVSTPNQDSPLMEAGKVPLVVVDMWEHAYYL 84          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig142432.2936.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JBD2_9PHAE9.910e-1873.91Superoxide dismutase [Fe] n=1 Tax=Ectocarpus sp. C... [more]
A0A836CJJ6_9STRA5.020e-1048.89Superoxide dismutase [Fe] n=1 Tax=Tribonema minus ... [more]
A0A2P8R3N0_9PROT1.170e-852.17Superoxide dismutase n=1 Tax=Campylobacter blaseri... [more]
A0A268TZC1_9HELI1.750e-750.00Superoxide dismutase n=1 Tax=Helicobacter sp. 13S0... [more]
A0A650EM98_9HELI2.110e-750.00Superoxide dismutase n=2 Tax=Helicobacter TaxID=20... [more]
I7GZ20_9HELI2.230e-747.83Superoxide dismutase n=10 Tax=Helicobacter TaxID=2... [more]
A0A6L5WGD3_9PROT2.310e-747.83Superoxide dismutase n=1 Tax=Campylobacter portuca... [more]
A0A6G5QIY2_9PROT2.310e-750.00Superoxide dismutase n=5 Tax=Campylobacter mucosal... [more]
UPI001BA135802.310e-747.83superoxide dismutase n=1 Tax=Campylobacter anatoli... [more]
A0A7S2Y0M5_9STRA3.540e-740.00Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036314Manganese/iron superoxide dismutase, C-terminal domain superfamilyGENE3D2.40.500.20coord: 1..46
e-value: 9.7E-13
score: 49.7
IPR036314Manganese/iron superoxide dismutase, C-terminal domain superfamilySUPERFAMILY54719Fe,Mn superoxide dismutase (SOD), C-terminal domaincoord: 1..46
IPR019832Manganese/iron superoxide dismutase, C-terminalPFAMPF02777Sod_Fe_Ccoord: 1..46
e-value: 2.7E-11
score: 43.5
NoneNo IPR availablePANTHERPTHR43595:SF237S RIBOSOMAL PROTEIN S26, MITOCHONDRIALcoord: 1..46
NoneNo IPR availablePANTHERPTHR43595FAMILY NOT NAMEDcoord: 1..46
IPR019833Manganese/iron superoxide dismutase, binding sitePROSITEPS00088SOD_MNcoord: 37..44

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig142432contigH-elongata_contig142432:1459..1596 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig142432.2936.1mRNA_H-elongata_contig142432.2936.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig142432 1459..1596 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig142432.2936.1 ID=prot_H-elongata_contig142432.2936.1|Name=mRNA_H-elongata_contig142432.2936.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=46bp
WAFLYYDSEEKNLDVVVTENDDTPAMNPKTTPVLVLDLWEHSYYLD
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036314SOD_C_sf
IPR019832Mn/Fe_SOD_C
IPR019833Mn/Fe_SOD_BS