prot_H-elongata_contig14230.2928.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig14230.2928.1
Unique Nameprot_H-elongata_contig14230.2928.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length198
Homology
BLAST of mRNA_H-elongata_contig14230.2928.1 vs. uniprot
Match: D7G127_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G127_ECTSI)

HSP 1 Score: 242 bits (618), Expect = 8.530e-79
Identity = 131/197 (66.50%), Postives = 159/197 (80.71%), Query Frame = 0
Query:    1 MGVLMCMGIICLSVVTGLGVEAFSWYLVYRKPDYQRLKRHIEKLAKELEKKKAEPVGIDNEKKREKSQRAVSRLEKDLQEATKEIHALSMTSKMITAVVVMVIMIGVNKSLSGMVVAKLPFVPFSLVQKITHRGLAGDDPTDCSVAFLFALCQAGVKGNIAKLVGVGQPKGMKENNPLADLSAQYEDPGKDTHAKTQ 197
            MGVLMC+ I+ LS +  L  EA+SWY VYRKP+YQRLKRHIE L K++EKKKAEPVG   E+K  K+ +A+SRLEKDL EATK++ AL+M++K++ AV +MV+MI +NKS +G+VVAKLPFVP SLVQKI+HR L G+DPTDCSVAF+FALCQAGVKGNI KLVGVG PKGMKE NP A+L A  E+     HAK Q
Sbjct:    1 MGVLMCVVIMALSALIALLTEAYSWYTVYRKPEYQRLKRHIENLVKDVEKKKAEPVGGSVERK-VKNLKALSRLEKDLAEATKDLQALTMSNKLVVAVTLMVVMIAINKSFAGIVVAKLPFVPISLVQKISHRALEGEDPTDCSVAFIFALCQAGVKGNIVKLVGVGHPKGMKEANPFAELGAPVEE----DHAKVQ 192          
BLAST of mRNA_H-elongata_contig14230.2928.1 vs. uniprot
Match: A0A2U1LDT4_ARTAN (Calcium load-activated calcium channel n=1 Tax=Artemisia annua TaxID=35608 RepID=A0A2U1LDT4_ARTAN)

HSP 1 Score: 119 bits (297), Expect = 3.000e-30
Identity = 64/163 (39.26%), Postives = 100/163 (61.35%), Query Frame = 0
Query:    9 IICLSVVTGLGVEAFSWYLVYRKPDYQRLKRHIEKLAKELEKKKAEPVGIDNEKKREKSQRAVSRLEKDLQEATKEIHALSMTSKMITAVVVMVIMIGVNKSLSGMVVAKLPFVPFSLVQKITHRGLAGDDPTDCSVAFLFALCQAGVKGNIAKLVGVGQPKG 171
            I+  S +T +  EA SW L+YR+  Y+ LK  I+K +K+LE      +  DN   ++   + + R+E  L+E+T+++      S  + A+V+ ++   +N    G VVAKLPFVPF +VQK++HRGL GDD TDCS+AFL+ LC   ++ N+ K +G   P+G
Sbjct:   17 IVATSFLTAVVCEAISWLLIYRRTSYKSLKTAIDKASKKLE-----TMKTDNMVSKKNKAKKIDRVETTLKESTRDLSLFKFKSGTVVALVLFIVFGLMNSLYEGRVVAKLPFVPFKIVQKMSHRGLRGDDYTDCSMAFLYFLCSISIRTNLQKFLGFSPPRG 174          
BLAST of mRNA_H-elongata_contig14230.2928.1 vs. uniprot
Match: W9SNZ3_9ROSA (Calcium load-activated calcium channel n=7 Tax=fabids TaxID=91835 RepID=W9SNZ3_9ROSA)

HSP 1 Score: 118 bits (296), Expect = 4.350e-30
Identity = 65/163 (39.88%), Postives = 100/163 (61.35%), Query Frame = 0
Query:    9 IICLSVVTGLGVEAFSWYLVYRKPDYQRLKRHIEKLAKELEKKKAEPVGIDNEKKREKSQRAVSRLEKDLQEATKEIHALSMTSKMITAVVVMVIMIGVNKSLSGMVVAKLPFVPFSLVQKITHRGLAGDDPTDCSVAFLFALCQAGVKGNIAKLVGVGQPKG 171
            ++ +S+ T +  EA SW L+YR   Y+ L+  I+K AK+LE  K E   I  +K + K    + R+E  L+E+++++      S  + A+V+ V+   +N    G VVAKLPF PF LV K++HRGL G+DPTDCS+AFL+ LC   ++ N+ K +G   P+G
Sbjct:   18 VVGISICTAVVCEAISWLLIYRTNSYKSLRSSIDKAAKKLETMKTESAKIAAKKSKTKK---IDRVETSLKESSRDLSLFKFKSGAVVALVLFVVFGLLNSLFEGKVVAKLPFKPFGLVMKMSHRGLQGNDPTDCSMAFLYFLCSISIRTNLQKFLGFSPPRG 177          
BLAST of mRNA_H-elongata_contig14230.2928.1 vs. uniprot
Match: A0A0A0LGX0_CUCSA (Calcium load-activated calcium channel n=7 Tax=fabids TaxID=91835 RepID=A0A0A0LGX0_CUCSA)

HSP 1 Score: 118 bits (295), Expect = 6.140e-30
Identity = 65/165 (39.39%), Postives = 101/165 (61.21%), Query Frame = 0
Query:    7 MGIICLSVVTGLGVEAFSWYLVYRKPDYQRLKRHIEKLAKELEKKKAEPVGIDNEKKREKSQRAVSRLEKDLQEATKEIHALSMTSKMITAVVVMVIMIGVNKSLSGMVVAKLPFVPFSLVQKITHRGLAGDDPTDCSVAFLFALCQAGVKGNIAKLVGVGQPKG 171
            + ++ +SV T +  EA SW L+YR   Y+ L+  I+K AK+LE  K +   I  +K + K    + R+E  L+E+++++      S  + A+V+ V+   +N    G VVAKLPF PF LV K++HRGL GDDPTDC++AFL+ LC   ++ N+ K +G   P+G
Sbjct:   16 LSVVGISVCTAVICEAISWVLIYRTNSYKTLRSSIDKAAKKLETMKTDSSKITVKKSKTKK---IDRIETSLKESSRDLSLFKFKSGAVVALVLFVVFGLLNSLFEGKVVAKLPFKPFGLVMKMSHRGLQGDDPTDCAMAFLYFLCSISIRTNLQKFLGFSPPRG 177          
BLAST of mRNA_H-elongata_contig14230.2928.1 vs. uniprot
Match: A0A2P5C5L7_TREOI (Calcium load-activated calcium channel n=1 Tax=Trema orientale TaxID=63057 RepID=A0A2P5C5L7_TREOI)

HSP 1 Score: 117 bits (293), Expect = 1.260e-29
Identity = 65/163 (39.88%), Postives = 99/163 (60.74%), Query Frame = 0
Query:    9 IICLSVVTGLGVEAFSWYLVYRKPDYQRLKRHIEKLAKELEKKKAEPVGIDNEKKREKSQRAVSRLEKDLQEATKEIHALSMTSKMITAVVVMVIMIGVNKSLSGMVVAKLPFVPFSLVQKITHRGLAGDDPTDCSVAFLFALCQAGVKGNIAKLVGVGQPKG 171
            ++ +S+ T +  EA SW L+YR   Y+ L+  I+K AK+LE  K E       KK +   + + R+E  L+E+++++      S  + A+V+ V+   +N    G VVAKLPF PF LV K++HRGL GDDPTDCS+AFL+ LC   ++ N+ K +G   P+G
Sbjct:   18 VVGISICTAVVCEAISWILIYRTNSYKSLRSSIDKAAKKLENMKTETSAKIAAKKSK--TKKIDRVESSLKESSRDLSLFKFKSGAVVALVLFVVFGLLNSLFEGKVVAKLPFKPFGLVMKMSHRGLQGDDPTDCSMAFLYFLCSISIRTNLQKFLGFAPPRG 178          
BLAST of mRNA_H-elongata_contig14230.2928.1 vs. uniprot
Match: A0A2J6LTV4_LACSA (Calcium load-activated calcium channel n=2 Tax=Lactuca sativa TaxID=4236 RepID=A0A2J6LTV4_LACSA)

HSP 1 Score: 117 bits (292), Expect = 1.550e-29
Identity = 62/160 (38.75%), Postives = 99/160 (61.88%), Query Frame = 0
Query:   12 LSVVTGLGVEAFSWYLVYRKPDYQRLKRHIEKLAKELEKKKAEPVGIDNEKKREKSQRAVSRLEKDLQEATKEIHALSMTSKMITAVVVMVIMIGVNKSLSGMVVAKLPFVPFSLVQKITHRGLAGDDPTDCSVAFLFALCQAGVKGNIAKLVGVGQPKG 171
            +S+ T +  EA SW L+YR+  Y+ LK  I++ +K+LE  K  P  +   K ++     +SR+E  L+++++++      S  + A+V+ V+   +N    G  V KLPFVP S+VQK++HRGL GDDPTDCS+AFL+ LC   ++ N+ K +G   P+G
Sbjct:   16 ISLFTAIVCEAISWLLIYRRTSYKSLKSTIDQASKKLETMKTTPTTLKKSKAKK-----ISRVETSLKDSSRDLSLSKFKSGAVVALVLAVVFGVMNSLYEGKAVGKLPFVPVSIVQKMSHRGLRGDDPTDCSMAFLYFLCSMSIRTNLQKFLGFSPPRG 170          
BLAST of mRNA_H-elongata_contig14230.2928.1 vs. uniprot
Match: A0A164X6L5_DAUCS (Calcium load-activated calcium channel n=2 Tax=asterids TaxID=71274 RepID=A0A164X6L5_DAUCS)

HSP 1 Score: 117 bits (292), Expect = 1.820e-29
Identity = 63/163 (38.65%), Postives = 101/163 (61.96%), Query Frame = 0
Query:    9 IICLSVVTGLGVEAFSWYLVYRKPDYQRLKRHIEKLAKELEKKKAEPVGIDNEKKREKSQRAVSRLEKDLQEATKEIHALSMTSKMITAVVVMVIMIGVNKSLSGMVVAKLPFVPFSLVQKITHRGLAGDDPTDCSVAFLFALCQAGVKGNIAKLVGVGQPKG 171
            ++ +S+ T +  EA SW L+YR   Y+ LK  I+K +K+LE  K +P       K+ K+++ + R+E  L+E+++++      S  + A+V+ V+   +N    G  VAKLPFVP  LVQK++HRGL G+D TDCS+AFL+ LC   ++ N+ K +G   P+G
Sbjct:   17 VVGISICTAIVCEAISWLLIYRTSSYKSLKSTIDKASKKLETMKTDPTAPKISAKKSKTKK-IDRVETSLKESSRDLSLFKFKSGAVVALVLFVVFGFLNNLFEGKAVAKLPFVPIKLVQKMSHRGLQGEDFTDCSMAFLYFLCSISIRTNLQKFLGFSPPRG 178          
BLAST of mRNA_H-elongata_contig14230.2928.1 vs. uniprot
Match: A0A118JTC9_CYNCS (Calcium load-activated calcium channel n=1 Tax=Cynara cardunculus var. scolymus TaxID=59895 RepID=A0A118JTC9_CYNCS)

HSP 1 Score: 116 bits (291), Expect = 2.370e-29
Identity = 60/167 (35.93%), Postives = 97/167 (58.08%), Query Frame = 0
Query:   12 LSVVTGLGVEAFSWYLVYRKPDYQRLKRHIEKLAKELEKKKAEPVGIDNEKKREKSQRAVSRLEKDLQEATKEIHALSMTSKMITAVVVMVIMIGVNKSLSGMVVAKLPFVPFSLVQKITHRGLAGDDPTDCSVAFLFALCQAGVKGNIAKLVGVGQPKGMKENNPL 178
            +S  T +  EA SW L+YR+  Y+ LK  I+K +K+LE  K +   +     R+   + + R+E  L+E+++++      S  + A+++  +   +N    G  VAKLPF+P  +VQK++HRGL GDDPTDCS+AFL+ LC   ++ N+ K +G   P+G     P 
Sbjct:   20 ISFFTAIVCEAISWLLIYRRTSYKSLKSTIDKASKKLETMKTDSTAL-----RKSKTKKIDRVETSLKESSRDLSLFKFKSGAVVALILFAVFGFLNSLYEGKAVAKLPFIPLRIVQKMSHRGLQGDDPTDCSMAFLYFLCSISIRTNLQKFLGFSPPRGAAGAGPF 181          
BLAST of mRNA_H-elongata_contig14230.2928.1 vs. uniprot
Match: A0A2R6S218_ACTCC (Calcium load-activated calcium channel n=5 Tax=asterids TaxID=71274 RepID=A0A2R6S218_ACTCC)

HSP 1 Score: 115 bits (289), Expect = 4.980e-29
Identity = 65/163 (39.88%), Postives = 101/163 (61.96%), Query Frame = 0
Query:    9 IICLSVVTGLGVEAFSWYLVYRKPDYQRLKRHIEKLAKELEKKKAEPVGIDNEKKREKSQRAVSRLEKDLQEATKEIHALSMTSKMITAVVVMVIMIGVNKSLSGMVVAKLPFVPFSLVQKITHRGLAGDDPTDCSVAFLFALCQAGVKGNIAKLVGVGQPKG 171
            ++ +SV T +  EA SW L+YR   Y+ LK  I+K +K+LE  K +   I+N+ K +   + + R+E  L+E+ +++      S  + A+V+ V+   +N    G  VAKLPFVP  +VQK++HRGL GDDPTDCS+AFL+ LC   ++ N+ K +G   P+G
Sbjct:   18 VVGISVCTAIVCEAISWVLIYRTTSYKSLKSSIDKASKKLETMKTDS-SINNKPKSK--AKKMDRVETSLKESNRDLSLFKFKSGAVVALVLFVVFGLLNSLFEGKAVAKLPFVPVRIVQKMSHRGLQGDDPTDCSMAFLYFLCSISIRTNLQKFLGFSPPRG 177          
BLAST of mRNA_H-elongata_contig14230.2928.1 vs. uniprot
Match: A0A834HEN3_RHOSS (Calcium load-activated calcium channel n=2 Tax=Rhododendron simsii TaxID=118357 RepID=A0A834HEN3_RHOSS)

HSP 1 Score: 115 bits (289), Expect = 5.540e-29
Identity = 64/165 (38.79%), Postives = 103/165 (62.42%), Query Frame = 0
Query:    9 IICLSVVTGLGVEAFSWYLVYRKPDYQRLKRHIEKLAKELEKKKAE-PVGIDNEKKREKSQ-RAVSRLEKDLQEATKEIHALSMTSKMITAVVVMVIMIGVNKSLSGMVVAKLPFVPFSLVQKITHRGLAGDDPTDCSVAFLFALCQAGVKGNIAKLVGVGQPKG 171
            ++C+S+ T L  EA SW L+YR   Y+ LK  I+K +K+LE  K + P    ++   +KS+ + + R+E  L+E+++++      S  + A+V+ V+   +N    G  VAK+PFVP  LVQK++HRGL G+D TDCS+AFL+ LC   ++ N+ K +G   P+G
Sbjct:   17 VVCISLFTALLCEAISWLLIYRTTSYKSLKSSIDKASKKLETMKTDTPTNPSSKPLPKKSKTKKIDRVESSLKESSRDLSLFKFKSGAVVALVLFVVFGLLNSLFEGKAVAKIPFVPIRLVQKMSHRGLQGEDMTDCSMAFLYFLCSISIRTNLQKFLGFSPPRG 181          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig14230.2928.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G127_ECTSI8.530e-7966.50Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A2U1LDT4_ARTAN3.000e-3039.26Calcium load-activated calcium channel n=1 Tax=Art... [more]
W9SNZ3_9ROSA4.350e-3039.88Calcium load-activated calcium channel n=7 Tax=fab... [more]
A0A0A0LGX0_CUCSA6.140e-3039.39Calcium load-activated calcium channel n=7 Tax=fab... [more]
A0A2P5C5L7_TREOI1.260e-2939.88Calcium load-activated calcium channel n=1 Tax=Tre... [more]
A0A2J6LTV4_LACSA1.550e-2938.75Calcium load-activated calcium channel n=2 Tax=Lac... [more]
A0A164X6L5_DAUCS1.820e-2938.65Calcium load-activated calcium channel n=2 Tax=ast... [more]
A0A118JTC9_CYNCS2.370e-2935.93Calcium load-activated calcium channel n=1 Tax=Cyn... [more]
A0A2R6S218_ACTCC4.980e-2939.88Calcium load-activated calcium channel n=5 Tax=ast... [more]
A0A834HEN3_RHOSS5.540e-2938.79Calcium load-activated calcium channel n=2 Tax=Rho... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 64..91
NoneNo IPR availableCOILSCoilCoilcoord: 34..54
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 6..29
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 95..117
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..5
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 30..94
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 118..197
NoneNo IPR availableTMHMMTMhelixcoord: 95..117
NoneNo IPR availableTMHMMTMhelixcoord: 5..27
IPR002809Integral membrane protein EMC3/TMCO1-likeSMARTSM01415DUF106_2coord: 2..168
e-value: 4.4E-19
score: 79.4
IPR002809Integral membrane protein EMC3/TMCO1-likePFAMPF01956EMC3_TMCO1coord: 7..167
e-value: 6.1E-28
score: 97.7
IPR008559Calcium load-activated calcium channelPANTHERPTHR20917PNAS-RELATEDcoord: 9..174

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig14230contigH-elongata_contig14230:4499..7050 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig14230.2928.1mRNA_H-elongata_contig14230.2928.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig14230 4499..7050 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig14230.2928.1 ID=prot_H-elongata_contig14230.2928.1|Name=mRNA_H-elongata_contig14230.2928.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=198bp
MGVLMCMGIICLSVVTGLGVEAFSWYLVYRKPDYQRLKRHIEKLAKELEK
KKAEPVGIDNEKKREKSQRAVSRLEKDLQEATKEIHALSMTSKMITAVVV
MVIMIGVNKSLSGMVVAKLPFVPFSLVQKITHRGLAGDDPTDCSVAFLFA
LCQAGVKGNIAKLVGVGQPKGMKENNPLADLSAQYEDPGKDTHAKTQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002809EMC3/TMCO1
IPR008559TMCO1