mRNA_H-elongata_contig14225.2924.1 (mRNA) Himanthalia elongata Himel1 dioecious

BLAST of mRNA_H-elongata_contig14225.2924.1 vs. uniprot
Match: D7FPX0_ECTSI (RNA polymerase sigma factor n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FPX0_ECTSI)

HSP 1 Score: 342 bits (877), Expect = 2.020e-105
Identity = 227/491 (46.23%), Postives = 293/491 (59.67%), Query Frame = 2

Query:  221 CP-LKKALGAACFAGATALSSAFVA-TGAGGELYGFRPTHG-------TERVRHVINQNE------------RRNSFAMASTLTEPTPSMPSI----------KRKNENSRRKPPLTIEEERALLVNIEEAKALRRLQKRLAMA--------EKGGL-------------VRPEAWAREAGLEVDELRRILLEGLNAKQTLVVRNLPMVMQLVEEQYRWRLRGGYVSTADLLQEGAYALGLAADRFDASMPNRFLTYAMFLVRDKLDTAVASGSMALSVPATALKELHRARRDLAAELGRKPTEAEVASFFVNGMVML-EGVPFFAGG---------------------------------RAEKVDL----QPRIRKRRLELLTAVQKVSSIDTLIRDGTGNT-IPLVDTLVGHSVSPLHMPGNSDISELIPKVLTRREAEVVIMTCGLRKGRPMSIAECAQKLSLSIAKTKAMFEISLGKLKTAATAEN 1420
            CP L +ALG AC AGAT+LS+ FV   G  G  YG             T R R  +  ++            RRN  AM S   EP  +  +           +R    +RR P LT EEERALL  I+ A+ LR +Q+ L  A        EKG L             V   AWAREAG+EV++L R+L EG+ AKQTLV RN+PMV+++VE QYRWRLRGG VS ADLLQEGAYALG+AA+RFD +MPNRFLTYA++ VRDKLD A+A G+ A+SVPATALKE+HRARR+L   LGR P+EAE+A+FF NG+V++ +  P  + G                                 +A   D     Q R R+RRL LL+AVQKV+SID LIR   G+T +PLVDTLVG            DI+EL+P+VLT R+A +V M CGL  G+PM++AEC+++LSLS+A+TK++F+ SL KL+ AA A++
Sbjct:   18 CPFLTRALGVACLAGATSLSAGFVTPAGCRGGFYGINSAAXXXXXXATTVRQRGSVGGSKNPVGGRDGPIRLRRNHLAMVSATAEPPAATATDADAWAGATRGRRARGGARRTPALTTEEERALLAKIKNARTLRDIQRGLEAAAATAAGRGEKGALGDGRSADGGAGTAVTMGAWAREAGVEVEDLPRVLQEGIEAKQTLVERNMPMVIRMVEGQYRWRLRGGQVSFADLLQEGAYALGVAAERFDPTMPNRFLTYALYTVRDKLDVALARGNSAISVPATALKEVHRARRELTGRLGRTPSEAELANFFANGVVVVGDAEPAASAGDGGIRRGGADXXXXXXXXXXXXXXAVTDGEFAVKAASSDREARQQARTRRRRLNLLSAVQKVTSIDRLIRASDGSTMVPLVDTLVGDLEDGQPRSAGGDIAELLPRVLTPRQASLVRMACGLSDGKPMTMAECSKELSLSVARTKSLFDSSLQKLRAAAEADD 508          

BLAST of mRNA_H-elongata_contig14225.2924.1 vs. uniprot
Match: A0A1E7F5Q4_9STRA (Sigma2 domain of RNA polymerase sigma factor (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7F5Q4_9STRA)

HSP 1 Score: 103 bits (257), Expect = 1.810e-20
Identity = 88/330 (26.67%), Postives = 160/330 (48.48%), Query Frame = 2

Query:  473 LTIEEERALLVNIEEAKALRRLQKRLAMAEKGGLVRPEAWAREAGLEVDELRRILLEGLNAKQTLVVRNLPMVMQLVEEQYRWRLR--------GGYVSTADLLQEGAYALGLAADRFDASMPNRFLTYAMFLVRDKLDTAVASGSMALSVPA---TALKELHRARRDLAAELGRKPTEAEVASFFVNGMVMLEGVPFFAGGRAEKVDLQPRIRKRRLELLTAVQKVSSIDTLIRDGTGNTIPLVDTLVGHSVSP---------LHMPGNSDISELIPKVLTRREAEVVIMTCGLRKGRPMSIAECAQKLSLSIAKTKAMFEISLGKLKT 1402
            LT +EER +  +I +     +++  L   E       E WA+  GLEV  LRRI+ +G  A+  LV  N  +V  + +  Y    +        G  ++  D++QEG + L  AA+RF+     RF TYA + +R ++  +++  S  + +PA     L++L+RAR+++AAE+GR P++ E+A +                    K+ +  ++RK    +    + V S+++ +R GT +   +    +G  ++           H     DI  +I + L  RE EV+I+  GL  G  MS ++ A +L ++I + + +   +L KL++
Sbjct:    2 LTHDEEREITYSIRDLHKAVKIRDEL---EDDEFPTEEDWAKACGLEVMVLRRIMSKGQEARTVLVSANAGLVTSIAKRHYHALKQATDAMGGVGTILTLQDMIQEGNFGLMKAAERFEPERGWRFSTYATYWIRQRILRSISDSSRVIRLPAHVTATLQKLNRARKEMAAEIGRVPSDPELAHYM-------------------KISVD-KLRK----INDKARSVVSLESPLRQGTNHKAEMDQRTIGDFIASDAPTPEDDFQHRSLQRDIRAVINE-LAEREREVLILRFGLDNGESMSTSQTAMRLGITIDRVRYVEARALNKLRS 303          

BLAST of mRNA_H-elongata_contig14225.2924.1 vs. uniprot
Match: A0A8K2A7G1_9CYAN (RNA polymerase sigma factor, RpoD/SigA family n=2 Tax=Petrachloros TaxID=2918834 RepID=A0A8K2A7G1_9CYAN)

HSP 1 Score: 94.7 bits (234), Expect = 2.280e-17
Identity = 79/262 (30.15%), Postives = 128/262 (48.85%), Query Frame = 2

Query:  590 WAREAGLEVDELRRILLEGLNAKQTLVVRNLPMVMQLVEEQYRWRLRGGYVSTADLLQEGAYALGLAADRFDASMPNRFLTYAMFLVRDKLDTAVASGSMALSVP---ATALKELHRARRDLAAELGRKPTEAEVASFFVNGMVMLEGVPFFAGGRAEKVDLQP-RIRKRRLELLTAVQKVSSIDTLIRDGTGNTIPLVDTLVGHSVSPLHMPGNS----DISELIPKVLTRREAEVVIMTCGLRKGRPMSIAECAQKLSLS 1351
            WA+ A L   EL R L  G  AKQ ++  NL +V+ + ++  +  L        DL+QEG   L    ++FD +   +F TYA + +R  +  A+A  +  + +P      L ++ +A+R+LA +LGR  T AE+A                     E ++L+P +IR    E LT  ++  S+D  +R G      L D L   S SP           DI++L+ + LT ++ EV+ +  GL  G+ +S+A+  Q+LSLS
Sbjct:   73 WAKAAKLSEPELERQLQSGQRAKQKMIEANLRLVVSVAKKYQKRNLE-----LLDLIQEGTLGLERGVEKFDPTRGYKFSTYAYWWIRQAITRAIAQQARTIRLPIHITEKLNKIKKAQRELAQQLGRSATPAEIA---------------------EALELEPAQIR----EYLTIARQPISLD--LRVGDNQDTELRDLLEDDSQSPEQFTTGEALRDDINQLLEE-LTPQQREVLTLRFGLNNGKELSLAKVGQQLSLS 301          

BLAST of mRNA_H-elongata_contig14225.2924.1 vs. uniprot
Match: A0A0C1R336_9CYAN (RNA polymerase sigma factor n=3 Tax=Nostocales TaxID=1161 RepID=A0A0C1R336_9CYAN)

HSP 1 Score: 94.4 bits (233), Expect = 8.890e-17
Identity = 78/277 (28.16%), Postives = 139/277 (50.18%), Query Frame = 2

Query:  590 WAREAGLEVDELRRILLEGLNAKQTLVVRNLPMVMQLVEEQYRWRLRGGYVSTADLLQEGAYALGLAADRFDASMPNRFLTYAMFLVRDKLDTAVASGSMALSVPA---TALKELHRARRDLAAELGRKPTEAEVASFFVNGMVMLEGVPFFAGGRAEKVDLQP-RIRKRRLELLTAVQKVSSIDTLIRDGTGNTIPLVDTLVGHSVSPLHMPGNSDISELIPKVL---TRREAEVVIMTCGLRKGRPMSIAECAQKLSLSIAKTKAMFEISLGKLK 1399
            WA  A + V+EL +I L+GL AK+ ++  NL +V+ + +   +++ RG  +   DL+QEG   L  A ++FD +   RF TYA + +R  +  A+A+ S  + +P      L ++ +A+R +A E GR PT  ++A                     +++++ P ++R    E+L  V +  S++T +  G      L + L    V+P  M     + + +  +L   T RE +V++M  GL  G P S+AE  + L LS  + + +   +L KL+
Sbjct:  156 WAEVAKITVEELEQIQLQGLQAKEHMIKANLRLVVSVAK---KYQNRG--LELLDLVQEGTLGLERAVEKFDPTKGYRFSTYAYWWIRQGITRAIATSSRTIRLPVHITEKLNKIKKAQRKIAQEKGRTPTLEDLA---------------------QELEMTPTQVR----EVLLRVPRSVSLETKV--GKDKDTELGELLETDGVTPEQMLMRESLQKDLQHLLADLTSRERDVILMRFGLSDGHPYSLAEIGRALDLSRERVRQIESKALQKLR 400          

BLAST of mRNA_H-elongata_contig14225.2924.1 vs. uniprot
Match: A0A7S3ZRY1_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZRY1_9STRA)

HSP 1 Score: 93.6 bits (231), Expect = 1.090e-16
Identity = 95/323 (29.41%), Postives = 152/323 (47.06%), Query Frame = 2

Query:  473 LTIEEERALLVNIEEAKALRRLQK-RLAMAEKGGLVRPEA----WAREAGLEVDELRRILLEGLNAKQTLVVRNLPMVMQLVEEQYRWRLRGGYVSTADLLQEGAYALGLAADRFDASMPNRFLTYAMFLVRDKLDTAVASGSMALSVPATA---LKELHRARRDLAAELGRKPTEAEVASFFVNGMVMLEGVPFFAGGRAEKVDLQPRIRKRRLELLTAVQKVS-SIDTLIRDGTGNTIPLVDTLVGHSVSPLHMPGNSD----ISELIPKVLTRREAEVVIMTCGLRKGRPMSIAECAQKLSLSIAKTKAMFEISLGKLKT 1402
            LT +EE AL  +++    LRRL+  R A+A   G    +     WA+  G++ + L      G  A+ TL   NL +V+ + +   R+R  G  +   DLLQEGA+ L  A +RFD     RF TYA F +R     A+A  S  + +PA     L  L +A R L +ELGR  +  E+A                    AEKVD   R  ++  + L A ++V+    ++  +  GN     + L   + +P  +   +     +++L    LT RE +V+ MT GL    P+S  + A+ L +S  + + +   +LGKL++
Sbjct:   72 LTKDEEVALARSVQR---LRRLEDVRSALAHGTGRTEEQVPDFEWAQTLGVDFEYLSAEKQRGAAARATLTQANLRLVVSIAK---RYRFCG--LDREDLLQEGAFGLSRAVERFDPERGFRFSTYATFWIRQAALRALAEQSRVIRLPAHVHDQLASLRKASRALQSELGRDASTDELADHL--------------SASAEKVDFLRRCEQQDPQSLEAARQVNRGKGSMASNQNGNAPNFAELLADQTPAPEQVVEQAHRYERVTKLFDSALTARERDVLGMTFGLGGRAPLSKTKIAELLRVSRERVRQIEVRALGKLRS 372          

BLAST of mRNA_H-elongata_contig14225.2924.1 vs. uniprot
Match: A0A448YV05_9STRA (RNA_pol_sigma70 domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448YV05_9STRA)

HSP 1 Score: 95.1 bits (235), Expect = 1.620e-16
Identity = 76/290 (26.21%), Postives = 139/290 (47.93%), Query Frame = 2

Query:  590 WAREAGLEVDELRRILLEGLNAKQTLVVRNLPMVMQLVEEQY----RWRLRGGYVSTA----DLLQEGAYALGLAADRFDASMPNRFLTYAMFLVRDKLDTAVASGSMALSVPA---TALKELHRARRDLAAELGRKPTEAEVASFFVNGMVMLEGVPFFAGGRAEKVDLQPRIRKRRLELLTAVQKVSSIDTLIRDGTGNTIPLVDTLVGHSVSPLHMPGNSDISE--------LIPKVLTRREAEVVIMTCGLRKGRPMSIAECAQKLSLSIAKTKAMFEISLGKLKT 1402
            WAR   L+V ELR+++ EG  ++  LV  N  +V  + +  Y    +    GG V T     D++QEG   L  AA+RF+     RF TYA + +R ++  ++   S  + +PA     L++ ++ARR++AAE+GR P++AE+A +                       ++  + K R ++    + V S+++ +R G+ +   +    +G  ++        D  +         +   L  RE EV+IM  GL  G PMS ++ A +L ++  + + +   +L KL++
Sbjct:  312 WARACDLDVSELRKVMDEGQESRSLLVSANAGLVTSIAKRHYHVLKQMTNAGGGVGTILTLQDMIQEGNLGLMKAAERFEPERGWRFSTYATYWIRQRILQSITDTSRVIRLPAHVTATLQKFNKARREMAAEIGRMPSDAELAHY-----------------------MEIPVEKLR-KINEKARSVVSLESPLRVGSNHKAEVDRRTIGDFIASDAPTPEEDAQQKSLQRDIRAVVNELADREREVLIMRFGLDSGDPMSTSQTATQLGITTDRVRYIETRALNKLRS 577          

BLAST of mRNA_H-elongata_contig14225.2924.1 vs. uniprot
Match: UPI0019FC53B8 (RNA polymerase sigma factor, RpoD/SigA family n=1 Tax=Synechococcales cyanobacterium T60_A2020_003 TaxID=2774349 RepID=UPI0019FC53B8)

HSP 1 Score: 91.3 bits (225), Expect = 3.280e-16
Identity = 74/262 (28.24%), Postives = 125/262 (47.71%), Query Frame = 2

Query:  590 WAREAGLEVDELRRILLEGLNAKQTLVVRNLPMVMQLVEEQYRWRLRGGYVSTADLLQEGAYALGLAADRFDASMPNRFLTYAMFLVRDKLDTAVASGSMALSVP---ATALKELHRARRDLAAELGRKPTEAEVASFFVNGMVMLEGVPFFAGGRAEKVDLQP-RIRKRRLELLTAVQKVSSIDTLIRDGTGNTIPLVDTLVGHSVSP----LHMPGNSDISELIPKVLTRREAEVVIMTCGLRKGRPMSIAECAQKLSLS 1351
            WA  A L  DEL++++  G  AKQ ++  NL +V+ + ++  +  L        DL+QEG   L    ++FD +   +F TYA + +R  +  A+A  +  + +P      L ++ R +R+LA +LGR PT AE+                      E +DL+P +IR    E L   ++  S+D  +R G      L + L     SP     H     DI  L+ + LT ++ EV+ +  GL  G  +S+A+  Q++++S
Sbjct:   72 WAEAANLSEDELKKVMRVGQRAKQKMIEANLRLVVAIAKKYQKRNLE-----FLDLIQEGTLGLERGVEKFDPTKGYKFSTYAYWWIRQAITRAIAQQARTIRLPIHITEKLNKIKRIQRELAQQLGRTPTPAEIG---------------------ESLDLEPAQIR----EYLQIARQPVSLD--MRIGDNQDTELQELLEDEKASPEQYTTHELLRQDIEGLLAE-LTPQQREVLTLRFGLTDGNELSLAKVGQRMNIS 300          

BLAST of mRNA_H-elongata_contig14225.2924.1 vs. uniprot
Match: UPI001ABA4892 (RNA polymerase sigma factor SigC n=1 Tax=Aetokthonos hydrillicola TaxID=1550245 RepID=UPI001ABA4892)

HSP 1 Score: 90.5 bits (223), Expect = 1.600e-15
Identity = 85/300 (28.33%), Postives = 141/300 (47.00%), Query Frame = 2

Query:  584 EAWAREAGLEVDELRRILLEG----------------------LNAKQTLVVRNLPMVMQLVEEQYRWRLRGGYVSTADLLQEGAYALGLAADRFDASMPNRFLTYAMFLVRDKLDTAVASGSMALSVPA---TALKELHRARRDLAAELGRKPTEAEVASFFVNGMVMLEGVPFFAGGRAEKVDLQPRIRKRRLELLTAVQKVSSIDTLIRDGTGNTIPLVDTLVGHSVSPLHMPGNSDISELIPKVL---TRREAEVVIMTCGLRKGRPMSIAECAQKLSLSIAKTKAMFEISLGKLK 1399
            E WAR AG+EV EL+RIL +G                      L AK+ ++  NL +V+ + +   +++ RG  +   DL+QEG   L  A ++FD +   RF TYA + +R  +  A+A+ S  + +P      L ++ +A+R +A E GR PT  ++A       + LE  P              ++R    E+L  V +  S++T +  G      L + L    V+P  M     + + +  +L   T RE +V++M  GL  G P S+AE  + L LS  + + +   +L KL+
Sbjct:  131 ERWARAAGVEVLELKRILSQGKRXXXXXXXXXXXXXXXXXXXXLQAKEHMIKANLRLVVSVAK---KYQNRG--LELLDLVQEGTLGLERAVEKFDPTKGYRFSTYAYWWIRQGITRAIATSSRTIRLPVHITEKLNKIKKAQRKIAQEKGRTPTLEDLA-------LELEMTP-------------AQVR----EVLLRVPRSVSLETKV--GKDKDTELGELLETDGVTPEEMLMRESLQKDLQNLLADLTSRERDVILMRFGLSDGHPYSLAEIGRALDLSRERVRQIESKALQKLR 399          

BLAST of mRNA_H-elongata_contig14225.2924.1 vs. uniprot
Match: A0A7S0NWD6_9EUKA (Hypothetical protein n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0NWD6_9EUKA)

HSP 1 Score: 88.2 bits (217), Expect = 2.800e-15
Identity = 78/281 (27.76%), Postives = 133/281 (47.33%), Query Frame = 2

Query:  593 AREAGLEVDELRRILLEGLNAKQTLVVRNLPMVMQLVEEQYRWRLRGGYVSTADLLQEGAYALGLAADRFDASMPNRFLTYAMFLVRDKLDTAVASGSMALSVPA---TALKELHRARRDLAAELGRKPTEAEVASFFVNGMVMLEGVPFFAGGRAEKVDLQPRIRKRRLELLTAVQKVSSIDTLIRDGTGNTIPLVDTLVGHSVSPLHMPGNS----DISELIPKVLTRREAEVVIMTCGLRKGRPMSIAECAQKLSLSIAKTKAMFEISLGKLKTAATA 1414
            A + GL + E    L    +AK  LV  NL +V+ + ++     L     +  DL+QEG+  L  AA+++DA+   R  TYA + +R  +  A+A  S  + +P      + +L + RR+L  ELGR PTE E+A      M + EG       +  ++D +          LT V   + I    R G G+TI L   +   +  P      +    DI++++   LT RE+ V+ +  GL  GRP ++ E  + LS++  + + +   +L K++  + A
Sbjct:   41 AADLGLSIGEYANELARMRSAKGLLVNANLRLVVSIAKKYMNQGL-----TLQDLIQEGSLGLIKAAEKYDAARGFRLSTYATWWIRQSITRAIADQSRTIRMPVHMHDLMNQLRKHRRELQGELGRVPTETELA----RRMGVTEG-------KLRQIDCKAS--------LTVVSMDAEIGGGKRQGEGSTISLQARIADEAPQPSSNLERTMLREDINKMLDAKLTERESHVLRLRYGLDDGRPRTLEEIGRGLSVTRERVRQIESRALQKMRAPSCA 297          

BLAST of mRNA_H-elongata_contig14225.2924.1 vs. uniprot
Match: K9SR03_9SYNE (RNA polymerase sigma factor, cyanobacterial RpoD-like family n=2 Tax=Synechococcus sp. PCC 7502 TaxID=1173263 RepID=K9SR03_9SYNE)

HSP 1 Score: 88.6 bits (218), Expect = 2.840e-15
Identity = 70/262 (26.72%), Postives = 126/262 (48.09%), Query Frame = 2

Query:  584 EAWAREAGLEVDELRRILLEGLNAKQTLVVRNLPMVMQLVEEQYRWRLRGGYVSTADLLQEGAYALGLAADRFDASMPNRFLTYAMFLVRDKLDTAVASGSMALSVPA---TALKELHRARRDLAAELGRKPTEAEVASFFVNGMVMLEGVPFFAGGRAEKVDLQPRIRKRRLELLTAVQKVSSIDTLIRDGTGNTIPLVDTLVGHSVSPLHMPGNSDISELIPKVLTR---REAEVVIMTCGLRKGRPMSIAECAQKLSLS 1351
            E WA+  GLE + L   L +G  AK+ ++  NL +V+ + ++  +  L        DL+QEG   L  A D+FD +   +F TYA + +R  +  A+A  +  + +P      L ++ +A+R LA +LGR  T AEVA                     E ++++P   ++  E L+  ++  S+D  +R G      L D L     SP     N  + + +  +L+    ++ +V+I+  GL  G+ +S+A  ++++ LS
Sbjct:   75 EEWAQAVGLEPNALNDALKQGTRAKRKMIEANLRLVVSVAKKYQKRNLE-----LLDLVQEGTLGLERAVDKFDPTKGFKFSTYAYWWIRQAITRAIAQQARTIRLPVHITEKLNKIKKAQRQLAQDLGRVATAAEVA---------------------ETLEIKP---EQVRECLSLARQPISLD--LRIGDNQDTELADLLEDQGHSPETYALNESLRDGVQSLLSELSPKQRQVMILRYGLEDGQELSLASISKRMDLS 305