prot_H-elongata_contig142205.2921.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig142205.2921.1
Unique Name	prot_H-elongata_contig142205.2921.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	140

Homology

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BLAST of mRNA_H-elongata_contig142205.2921.1 vs. uniprot
Match: D8LSE6_ECTSI (NUOE homolog, NADH dehydrogenase (Ubiquinone) subunit n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSE6_ECTSI)

HSP 1 Score: 230 bits (586), Expect = 1.030e-73
Identity = 113/140 (80.71%), Postives = 119/140 (85.00%), Query Frame = 0

Query:    1 MFSQHKDSPDNNETTFFDFTDENYVRVKNILSKYPANYRQAAIIPLLDLAQRQARNEGRNRTPCERHGGWLPLAAMEKVAKIVGQENMKVYEVATFYTMFNREKRGKYFIQLCGTTPCMVCGSEDIKKTITDELGIKNGG 140
               QHKD+PDNNETTFFDFTDENY RV+ I++KYPANYRQA+IIPLLDLAQRQ             HGGWLPLAAMEKVAKIVGQ  MKVYEVATFYTMFNREKRGK+FIQLCGTTPCMVCGSEDIKKTI DELGIKNGG
Sbjct:   45 QLGQHKDTPDNNETTFFDFTDENYARVEKIMAKYPANYRQASIIPLLDLAQRQ-------------HGGWLPLAAMEKVAKIVGQHEMKVYEVATFYTMFNREKRGKHFIQLCGTTPCMVCGSEDIKKTIMDELGIKNGG 171

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BLAST of mRNA_H-elongata_contig142205.2921.1 vs. uniprot
Match: A0A7S1VGY5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1VGY5_9STRA)

HSP 1 Score: 196 bits (498), Expect = 1.850e-60
Identity = 97/137 (70.80%), Postives = 109/137 (79.56%), Query Frame = 0

Query:    3 SQHKDSPDNNETTFFDFTDENYVRVKNILSKYPANYRQAAIIPLLDLAQRQARNEGRNRTPCERHGGWLPLAAMEKVAKIVGQENMKVYEVATFYTMFNREKRGKYFIQLCGTTPCMVCGSEDIKKTITDELGIKNG 139
            S H D+PDNNE TFFDFTDENY RV  IL KYP NY+Q+A+IPLLDLAQRQ             HGGWLPLAA+EKVAK+VG   ++VYEVA+FYTMFNR K GKYF+QLCGTTPCM+CGSEDIK+TI  ELGIKNG
Sbjct:   61 SFHIDTPDNNEETFFDFTDENYKRVDMILGKYPDNYKQSAVIPLLDLAQRQ-------------HGGWLPLAAVEKVAKVVGIAPIRVYEVASFYTMFNRTKVGKYFLQLCGTTPCMICGSEDIKQTIEQELGIKNG 184

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BLAST of mRNA_H-elongata_contig142205.2921.1 vs. uniprot
Match: A0A835YYT9_9STRA (NADH dehydrogenase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYT9_9STRA)

HSP 1 Score: 192 bits (487), Expect = 7.610e-59
Identity = 93/139 (66.91%), Postives = 110/139 (79.14%), Query Frame = 0

Query:    1 MFSQHKDSPDNNETTFFDFTDENYVRVKNILSKYPANYRQAAIIPLLDLAQRQARNEGRNRTPCERHGGWLPLAAMEKVAKIVGQENMKVYEVATFYTMFNREKRGKYFIQLCGTTPCMVCGSEDIKKTITDELGIKNG 139
            +  +HKD+P N   T F+F+DEN+  V+ IL+KYPANYRQAA IPLLDLAQRQ             +GGWLPLAAM KVA ++G + M++YEVATFYTMFNREKRG+YFIQLCGTTPCMVCGS DIKKTIT+ELGIK+G
Sbjct:   35 VLGKHKDAPGNTTDTHFEFSDENFELVEKILAKYPANYRQAAAIPLLDLAQRQ-------------NGGWLPLAAMNKVAAVIGVQPMRIYEVATFYTMFNREKRGQYFIQLCGTTPCMVCGSNDIKKTITEELGIKDG 160

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BLAST of mRNA_H-elongata_contig142205.2921.1 vs. uniprot
Match: A0A7S2WTS6_9STRA (Hypothetical protein (Fragment) n=2 Tax=Ochrophyta TaxID=2696291 RepID=A0A7S2WTS6_9STRA)

HSP 1 Score: 190 bits (483), Expect = 1.960e-58
Identity = 95/137 (69.34%), Postives = 106/137 (77.37%), Query Frame = 0

Query:    3 SQHKDSPDNNETTFFDFTDENYVRVKNILSKYPANYRQAAIIPLLDLAQRQARNEGRNRTPCERHGGWLPLAAMEKVAKIVGQENMKVYEVATFYTMFNREKRGKYFIQLCGTTPCMVCGSEDIKKTITDELGIKNG 139
            S H ++PDN   T+FDFTDENY RV  ILSKYPANY+Q+ IIPLLDLAQRQ             HGGWLP+AAM+KVA+IVG    +VYEVA+FYTMFNR K GKYFIQLCGTTPCM+CGSEDIKKTI   LGIKNG
Sbjct:   29 SFHINTPDNTPETYFDFTDENYKRVNKILSKYPANYKQSGIIPLLDLAQRQ-------------HGGWLPVAAMDKVAEIVGAAPSRVYEVASFYTMFNRTKVGKYFIQLCGTTPCMICGSEDIKKTIEKHLGIKNG 152

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BLAST of mRNA_H-elongata_contig142205.2921.1 vs. uniprot
Match: A0A7S2FXN0_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FXN0_9STRA)

HSP 1 Score: 191 bits (485), Expect = 2.240e-58
Identity = 95/137 (69.34%), Postives = 108/137 (78.83%), Query Frame = 0

Query:    3 SQHKDSPDNNETTFFDFTDENYVRVKNILSKYPANYRQAAIIPLLDLAQRQARNEGRNRTPCERHGGWLPLAAMEKVAKIVGQENMKVYEVATFYTMFNREKRGKYFIQLCGTTPCMVCGSEDIKKTITDELGIKNG 139
            SQH+ + +NN  TFFDFT+ENY  V+N+L KYP NY+QA IIPLLDLAQRQ             +GGWLPLAAM+ VAK+V    M+VYEVATFYTMFNREKRGKYFIQLCGTTPCMVCGSEDIK+TI DELGI +G
Sbjct:   41 SQHQHTDENNSQTFFDFTEENYKLVENVLGKYPGNYKQAGIIPLLDLAQRQ-------------NGGWLPLAAMDCVAKVVEVPPMRVYEVATFYTMFNREKRGKYFIQLCGTTPCMVCGSEDIKQTIMDELGIHDG 164

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BLAST of mRNA_H-elongata_contig142205.2921.1 vs. uniprot
Match: A0A1V9ZR12_9STRA (NADH dehydrogenase flavoprotein 2, mitochondrial n=4 Tax=Saprolegniaceae TaxID=4764 RepID=A0A1V9ZR12_9STRA)

HSP 1 Score: 189 bits (480), Expect = 6.690e-58
Identity = 94/137 (68.61%), Postives = 107/137 (78.10%), Query Frame = 0

Query:    3 SQHKDSPDNNETTFFDFTDENYVRVKNILSKYPANYRQAAIIPLLDLAQRQARNEGRNRTPCERHGGWLPLAAMEKVAKIVGQENMKVYEVATFYTMFNREKRGKYFIQLCGTTPCMVCGSEDIKKTITDELGIKNG 139
            SQH+D+PDN + T FDFT ENYV+V  ILS+YP NY+ +AIIPLLDLAQRQ             HGGWLPLAAM KVA+I   + ++VYEVATFYTMFNREK GKYFIQLCGTTPCM+CGSE+IKKTI D LGIK G
Sbjct:   25 SQHRDTPDNTKETAFDFTKENYVKVHAILSRYPENYKASAIIPLLDLAQRQ-------------HGGWLPLAAMNKVARITEVKPIQVYEVATFYTMFNREKVGKYFIQLCGTTPCMICGSEEIKKTIEDHLGIKEG 148

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BLAST of mRNA_H-elongata_contig142205.2921.1 vs. uniprot
Match: A0A7S2MPT9_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2MPT9_9STRA)

HSP 1 Score: 188 bits (478), Expect = 1.430e-57
Identity = 94/137 (68.61%), Postives = 106/137 (77.37%), Query Frame = 0

Query:    3 SQHKDSPDNNETTFFDFTDENYVRVKNILSKYPANYRQAAIIPLLDLAQRQARNEGRNRTPCERHGGWLPLAAMEKVAKIVGQENMKVYEVATFYTMFNREKRGKYFIQLCGTTPCMVCGSEDIKKTITDELGIKNG 139
            S H D+PDN   T FDFT ENY RV +IL+K+PANY+QA IIPLLDLAQRQ             HGGWLP+AAM+KVA+IV     +VYEVA+FYTMFNR KRGKYF+QLCGTTPCM+CGSEDIKKTI D LGIKNG
Sbjct:   30 SYHLDTPDNTVETKFDFTIENYKRVDSILAKFPANYKQAGIIPLLDLAQRQ-------------HGGWLPVAAMDKVAQIVDTNPARVYEVASFYTMFNRTKRGKYFLQLCGTTPCMICGSEDIKKTIEDHLGIKNG 153

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BLAST of mRNA_H-elongata_contig142205.2921.1 vs. uniprot
Match: A0A6G0WXT0_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WXT0_9STRA)

HSP 1 Score: 188 bits (478), Expect = 1.860e-57
Identity = 93/137 (67.88%), Postives = 107/137 (78.10%), Query Frame = 0

Query:    3 SQHKDSPDNNETTFFDFTDENYVRVKNILSKYPANYRQAAIIPLLDLAQRQARNEGRNRTPCERHGGWLPLAAMEKVAKIVGQENMKVYEVATFYTMFNREKRGKYFIQLCGTTPCMVCGSEDIKKTITDELGIKNG 139
            SQH+D+PDN + T FDFT+ NYV+V  IL +YP NY+ +AIIPLLDLAQRQ             HGGWLPLAAM KVA+IV  + ++VYEVATFYTMFNREK GKYFIQLCGTTPCM+CGSE+IKKTI D LGIK G
Sbjct:   36 SQHRDTPDNTKETAFDFTEANYVKVHAILGRYPENYKASAIIPLLDLAQRQ-------------HGGWLPLAAMNKVARIVDVKPIQVYEVATFYTMFNREKVGKYFIQLCGTTPCMICGSEEIKKTIEDHLGIKEG 159

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BLAST of mRNA_H-elongata_contig142205.2921.1 vs. uniprot
Match: A0A024UAQ9_9STRA (Uncharacterized protein n=8 Tax=Aphanomyces TaxID=100860 RepID=A0A024UAQ9_9STRA)

HSP 1 Score: 188 bits (477), Expect = 2.080e-57
Identity = 93/137 (67.88%), Postives = 106/137 (77.37%), Query Frame = 0

Query:    3 SQHKDSPDNNETTFFDFTDENYVRVKNILSKYPANYRQAAIIPLLDLAQRQARNEGRNRTPCERHGGWLPLAAMEKVAKIVGQENMKVYEVATFYTMFNREKRGKYFIQLCGTTPCMVCGSEDIKKTITDELGIKNG 139
            SQH+D+PDN + T FDFT+ NYV+V  IL +YP NY+ +AIIPLLDLAQRQ             HGGWLPLAAM KVA+IV  + M+VYEVATFYTMFNREK GKYFIQLCGTTPCM+CGSE+IKK I D LGIK G
Sbjct:   28 SQHRDTPDNTKETSFDFTEANYVKVHAILGRYPENYKASAIIPLLDLAQRQ-------------HGGWLPLAAMNKVARIVDVKPMQVYEVATFYTMFNREKVGKYFIQLCGTTPCMICGSEEIKKVIEDHLGIKEG 151

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BLAST of mRNA_H-elongata_contig142205.2921.1 vs. uniprot
Match: A0A485LNI5_9STRA (Aste57867_23435 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LNI5_9STRA)

HSP 1 Score: 187 bits (475), Expect = 4.170e-57
Identity = 92/137 (67.15%), Postives = 107/137 (78.10%), Query Frame = 0

Query:    3 SQHKDSPDNNETTFFDFTDENYVRVKNILSKYPANYRQAAIIPLLDLAQRQARNEGRNRTPCERHGGWLPLAAMEKVAKIVGQENMKVYEVATFYTMFNREKRGKYFIQLCGTTPCMVCGSEDIKKTITDELGIKNG 139
            SQH+D+PDN + T FDF++ NYV+V  IL +YP NY+ +AIIPLLDLAQRQ             HGGWLPLAAM KVA+IV  + ++VYEVATFYTMFNREK GKYFIQLCGTTPCM+CGSE+IKKTI D LGIK G
Sbjct:   28 SQHRDTPDNTKETAFDFSESNYVKVHAILGRYPENYKASAIIPLLDLAQRQ-------------HGGWLPLAAMNKVARIVDVKPIQVYEVATFYTMFNREKVGKYFIQLCGTTPCMICGSEEIKKTIEDHLGIKEG 151

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig142205.2921.1 vs. uniprot

BLAST of mRNA_H-elongata_contig142205.2921.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D8LSE6_ECTSI	1.030e-73	80.71	NUOE homolog, NADH dehydrogenase (Ubiquinone) subu...	[more]
A0A7S1VGY5_9STRA	1.850e-60	70.80	Hypothetical protein (Fragment) n=1 Tax=Grammatoph...	[more]
A0A835YYT9_9STRA	7.610e-59	66.91	NADH dehydrogenase n=1 Tax=Tribonema minus TaxID=3...	[more]
A0A7S2WTS6_9STRA	1.960e-58	69.34	Hypothetical protein (Fragment) n=2 Tax=Ochrophyta...	[more]
A0A7S2FXN0_9STRA	2.240e-58	69.34	Hypothetical protein n=1 Tax=Florenciella parvula ...	[more]
A0A1V9ZR12_9STRA	6.690e-58	68.61	NADH dehydrogenase flavoprotein 2, mitochondrial n...	[more]
A0A7S2MPT9_9STRA	1.430e-57	68.61	Hypothetical protein n=1 Tax=Helicotheca tamesis T...	[more]
A0A6G0WXT0_9STRA	1.860e-57	67.88	Uncharacterized protein n=1 Tax=Aphanomyces euteic...	[more]
A0A024UAQ9_9STRA	2.080e-57	67.88	Uncharacterized protein n=8 Tax=Aphanomyces TaxID=...	[more]
A0A485LNI5_9STRA	4.170e-57	67.15	Aste57867_23435 protein n=1 Tax=Aphanomyces stella...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PFAM	PF01257	2Fe-2S_thioredx	coord: 27..139 e-value: 3.9E-31 score: 107.9
None	No IPR available	GENE3D	3.40.30.10		coord: 105..140 e-value: 4.0E-7 score: 32.0
None	No IPR available	PANTHER	PTHR10371	NADH DEHYDROGENASE UBIQUINONE FLAVOPROTEIN 2, MITOCHONDRIAL	coord: 4..139
None	No IPR available	PANTHER	PTHR10371:SF3	NADH DEHYDROGENASE [UBIQUINONE] FLAVOPROTEIN 2, MITOCHONDRIAL	coord: 4..139
IPR041921	NADH-quinone oxidoreductase subunit E, N-terminal	GENE3D	1.10.10.1590		coord: 17..58 e-value: 1.4E-7 score: 33.5 coord: 63..103 e-value: 3.2E-12 score: 48.3
IPR002023	NADH-quinone oxidoreductase subunit E-like	PIRSF	PIRSF000216	NDH-1_E	coord: 2..140 e-value: 7.7E-40 score: 134.9
IPR036249	Thioredoxin-like superfamily	SUPERFAMILY	52833	Thioredoxin-like	coord: 19..139

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig142205	contig	H-elongata_contig142205:507..1575 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig142205.2921.1	mRNA_H-elongata_contig142205.2921.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig142205 507..1575 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig142205.2921.1 ID=prot_H-elongata_contig142205.2921.1|Name=mRNA_H-elongata_contig142205.2921.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=140bp
MFSQHKDSPDNNETTFFDFTDENYVRVKNILSKYPANYRQAAIIPLLDLA
QRQARNEGRNRTPCERHGGWLPLAAMEKVAKIVGQENMKVYEVATFYTMF
NREKRGKYFIQLCGTTPCMVCGSEDIKKTITDELGIKNGG

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR041921	NuoE_N
IPR002023	NuoE-like
IPR036249	Thioredoxin-like_sf