mRNA_H-elongata_contig142156.2917.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig142156.2917.1 vs. uniprot
Match: A0A2S1PRW8_FUCSE (Putative argonaute n=1 Tax=Fucus serratus TaxID=87148 RepID=A0A2S1PRW8_FUCSE) HSP 1 Score: 283 bits (724), Expect = 2.040e-87 Identity = 127/140 (90.71%), Postives = 137/140 (97.86%), Query Frame = 1
Query: 10 QVRAIEQACSSLQNGYRPTITFIVVQKRHHTRLFQPRKEDQDRSGNVFPGTVVETGICHPMEWDFYLMSHGGLQGTSRPAKYHVLWDENAFDSDSLQMLCYHLCFMYCRCTRSVSIPPAVYYAHLVAFRAQFFVNVSIDT 429
+VRAIEQAC+SL++GYRP+ITFIVVQKRHHTRLFQPR+EDQD+SGNVFPGTVVETGICHPMEWDFYLMSHGGLQGTSRPAKYHVLWDEN FDSDSLQ+LCYHLCFMYCRCTRSVSIPPAVYYAHLVAFRAQFFVNV ++
Sbjct: 798 EVRAIEQACASLESGYRPSITFIVVQKRHHTRLFQPRREDQDKSGNVFPGTVVETGICHPMEWDFYLMSHGGLQGTSRPAKYHVLWDENKFDSDSLQLLCYHLCFMYCRCTRSVSIPPAVYYAHLVAFRAQFFVNVGDES 937
BLAST of mRNA_H-elongata_contig142156.2917.1 vs. uniprot
Match: D7FQK3_ECTSI (Argonaute 1 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQK3_ECTSI) HSP 1 Score: 282 bits (722), Expect = 3.510e-87 Identity = 127/140 (90.71%), Postives = 136/140 (97.14%), Query Frame = 1
Query: 10 QVRAIEQACSSLQNGYRPTITFIVVQKRHHTRLFQPRKEDQDRSGNVFPGTVVETGICHPMEWDFYLMSHGGLQGTSRPAKYHVLWDENAFDSDSLQMLCYHLCFMYCRCTRSVSIPPAVYYAHLVAFRAQFFVNVSIDT 429
+VRAIEQAC++L+ GYRPTITFIVVQKRHHTRLFQP ++DQD+SGNVFPGTVVETGICHPMEWDFYLMSHGGLQGTSRPAKYHVLWDENAFDSDSLQ+LCYHLCFMYCRCTRSVSIPPAVYYAHLVAFRAQFFVNV D+
Sbjct: 789 EVRAIEQACAALEVGYRPTITFIVVQKRHHTRLFQPNRDDQDKSGNVFPGTVVETGICHPMEWDFYLMSHGGLQGTSRPAKYHVLWDENAFDSDSLQLLCYHLCFMYCRCTRSVSIPPAVYYAHLVAFRAQFFVNVGDDS 928
BLAST of mRNA_H-elongata_contig142156.2917.1 vs. uniprot
Match: A0A2K3PG38_TRIPR (Argonaute protein n=1 Tax=Trifolium pratense TaxID=57577 RepID=A0A2K3PG38_TRIPR) HSP 1 Score: 204 bits (520), Expect = 9.220e-62 Identity = 91/143 (63.64%), Postives = 115/143 (80.42%), Query Frame = 1
Query: 1 LFEQVRAIEQACSSLQNGYRPTITFIVVQKRHHTRLFQPRKEDQDRSGNVFPGTVVETGICHPMEWDFYLMSHGGLQGTSRPAKYHVLWDENAFDSDSLQMLCYHLCFMYCRCTRSVSIPPAVYYAHLVAFRAQFFVNVSIDT 429
L +V AI +AC+S++NGY P ITF+VVQKRHHTRLF R+E+ D+SGN+ PGTVV+T ICHP E+DFYL SH G+QGTSRPA YHVL+DEN F +D LQ L +LC+ Y RCTRSVSI P YYAHL+AFRA+++++ + DT
Sbjct: 260 LLYEVDAIRKACASIENGYLPPITFVVVQKRHHTRLFPVRREETDKSGNIMPGTVVDTNICHPREFDFYLNSHAGIQGTSRPAHYHVLFDENRFSADHLQSLTNNLCYTYARCTRSVSIVPPAYYAHLLAFRARYYLSDAADT 402
BLAST of mRNA_H-elongata_contig142156.2917.1 vs. uniprot
Match: A0A4P9VYH5_9FUNG (Piwi domain-containing protein (Fragment) n=2 Tax=Blyttiomyces helicus TaxID=388810 RepID=A0A4P9VYH5_9FUNG) HSP 1 Score: 197 bits (502), Expect = 1.560e-61 Identity = 91/133 (68.42%), Postives = 105/133 (78.95%), Query Frame = 1
Query: 7 EQVRAIEQACSSLQNGYRPTITFIVVQKRHHTRLFQPRKEDQDRSGNVFPGTVVETGICHPMEWDFYLMSHGGLQGTSRPAKYHVLWDENAFDSDSLQMLCYHLCFMYCRCTRSVSIPPAVYYAHLVAFRAQF 405
E+V AI +AC+ L+ GY PT TF++VQKRHH R F RKED DRSGNV PGTVVETGI HP E+DFYL SH GLQGTS+P YHVL+DEN F SD+LQ L Y LC++YCR TRSVS+ P YYAHLVA RA+F
Sbjct: 97 EEVAAIRRACAILEAGYNPTTTFVIVQKRHHARFFPLRKEDADRSGNVLPGTVVETGITHPSEFDFYLASHPGLQGTSKPTHYHVLYDENRFTSDALQELTYRLCYLYCRATRSVSVCPPAYYAHLVAARARF 229
BLAST of mRNA_H-elongata_contig142156.2917.1 vs. uniprot
Match: A0A2H5QNJ6_CITUN (Piwi domain-containing protein n=1 Tax=Citrus unshiu TaxID=55188 RepID=A0A2H5QNJ6_CITUN) HSP 1 Score: 192 bits (489), Expect = 6.720e-60 Identity = 87/141 (61.70%), Postives = 108/141 (76.60%), Query Frame = 1
Query: 1 LFEQVRAIEQACSSLQNGYRPTITFIVVQKRHHTRLFQP---RKEDQDRSGNVFPGTVVETGICHPMEWDFYLMSHGGLQGTSRPAKYHVLWDENAFDSDSLQMLCYHLCFMYCRCTRSVSIPPAVYYAHLVAFRAQFFVN 414
L ++ AI QAC+SL+ GY P +TF+VVQKRHHTRLF R++ DRSGN+ PGTVV+T ICHP E+DFYL SH G+QGTSRP YHVL+DEN F +D LQ+L +LC+ Y RCTRSVSI P YYAHL AFRA++++
Sbjct: 26 LLHEMNAIRQACASLEEGYAPPVTFVVVQKRHHTRLFPADHNRRDLTDRSGNILPGTVVDTQICHPTEFDFYLNSHAGIQGTSRPTHYHVLYDENRFTADGLQVLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARYYIE 166
BLAST of mRNA_H-elongata_contig142156.2917.1 vs. uniprot
Match: A0A1J3GMK6_NOCCA (Protein argonaute 5 (Fragment) n=2 Tax=Noccaea caerulescens TaxID=107243 RepID=A0A1J3GMK6_NOCCA) HSP 1 Score: 190 bits (482), Expect = 1.110e-59 Identity = 87/142 (61.27%), Postives = 108/142 (76.06%), Query Frame = 1
Query: 10 QVRAIEQACSSLQNGYRPTITFIVVQKRHHTRLFQPR---KEDQDRSGNVFPGTVVETGICHPMEWDFYLMSHGGLQGTSRPAKYHVLWDENAFDSDSLQMLCYHLCFMYCRCTRSVSIPPAVYYAHLVAFRAQFFVNVSID 426
+V AI +AC SLQ GY+P ITF++VQKRHHTR F + +E D+SGN+ PGTVV+T ICHP E+DFYL SH G+QGTSRPA YHVL DENAF +D+LQML LC+ + RCTRSVSI P YYAHL AFRA++++ +
Sbjct: 1 EVLAIRKACHSLQEGYQPRITFVIVQKRHHTRFFPAQHGHRETTDKSGNILPGTVVDTKICHPNEFDFYLNSHAGIQGTSRPAHYHVLLDENAFSADALQMLTNSLCYTFARCTRSVSIVPPAYYAHLAAFRARYYMESEMS 142
BLAST of mRNA_H-elongata_contig142156.2917.1 vs. uniprot
Match: A0A446MKS1_TRITD (Piwi domain-containing protein n=2 Tax=Triticum turgidum subsp. durum TaxID=4567 RepID=A0A446MKS1_TRITD) HSP 1 Score: 192 bits (489), Expect = 1.380e-59 Identity = 88/141 (62.41%), Postives = 107/141 (75.89%), Query Frame = 1
Query: 1 LFEQVRAIEQACSSLQNGYRPTITFIVVQKRHHTRLFQPRKEDQ---DRSGNVFPGTVVETGICHPMEWDFYLMSHGGLQGTSRPAKYHVLWDENAFDSDSLQMLCYHLCFMYCRCTRSVSIPPAVYYAHLVAFRAQFFVN 414
L ++ AI +AC+SL+ Y+P +TF+VVQKRHHTRLF DQ DRSGN+ PGTVV++ ICHP E+DFYL SH G+QGTSRPA YHVLWDEN F +D LQ L +LC+ Y RCTRSVSI P YYAHL AFRA+F++
Sbjct: 40 LLYELDAIRKACASLEPNYQPPVTFVVVQKRHHTRLFANNHNDQRTVDRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFTADELQTLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYME 180
BLAST of mRNA_H-elongata_contig142156.2917.1 vs. uniprot
Match: A0A446LC47_TRITD (Piwi domain-containing protein n=5 Tax=Triticum turgidum subsp. durum TaxID=4567 RepID=A0A446LC47_TRITD) HSP 1 Score: 192 bits (489), Expect = 1.990e-59 Identity = 88/141 (62.41%), Postives = 107/141 (75.89%), Query Frame = 1
Query: 1 LFEQVRAIEQACSSLQNGYRPTITFIVVQKRHHTRLFQPRKEDQ---DRSGNVFPGTVVETGICHPMEWDFYLMSHGGLQGTSRPAKYHVLWDENAFDSDSLQMLCYHLCFMYCRCTRSVSIPPAVYYAHLVAFRAQFFVN 414
L ++ AI +AC+SL+ Y+P +TF+VVQKRHHTRLF DQ DRSGN+ PGTVV++ ICHP E+DFYL SH G+QGTSRPA YHVLWDEN F +D LQ L +LC+ Y RCTRSVSI P YYAHL AFRA+F++
Sbjct: 52 LLYELDAIRKACASLEPNYQPPVTFVVVQKRHHTRLFANNHNDQRTVDRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFTADELQTLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYME 192
BLAST of mRNA_H-elongata_contig142156.2917.1 vs. uniprot
Match: A0A6M2EQP3_9ROSI (Piwi domain-containing protein n=1 Tax=Populus davidiana TaxID=266767 RepID=A0A6M2EQP3_9ROSI) HSP 1 Score: 190 bits (482), Expect = 2.640e-59 Identity = 85/137 (62.04%), Postives = 105/137 (76.64%), Query Frame = 1
Query: 13 VRAIEQACSSLQNGYRPTITFIVVQKRHHTRLF---QPRKEDQDRSGNVFPGTVVETGICHPMEWDFYLMSHGGLQGTSRPAKYHVLWDENAFDSDSLQMLCYHLCFMYCRCTRSVSIPPAVYYAHLVAFRAQFFVN 414
++AI QAC SL++GY P +TF+VVQKRHHTR F R++ D+SGN+ PGTVV+T ICHP E+DFYL SH G+QGTSRP YHVL+DEN F SD LQ L +LC+ Y RCTRSVSI P YYAHL AFRA++++
Sbjct: 1 MQAIRQACGSLEDGYGPRVTFVVVQKRHHTRFFPADHSRRDQTDKSGNILPGTVVDTAICHPTEFDFYLNSHAGIQGTSRPTHYHVLFDENNFSSDGLQTLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARYYIE 137
BLAST of mRNA_H-elongata_contig142156.2917.1 vs. uniprot
Match: D5ACK3_PICSI (Piwi domain-containing protein n=1 Tax=Picea sitchensis TaxID=3332 RepID=D5ACK3_PICSI) HSP 1 Score: 192 bits (487), Expect = 2.860e-59 Identity = 87/141 (61.70%), Postives = 108/141 (76.60%), Query Frame = 1
Query: 1 LFEQVRAIEQACSSLQNGYRPTITFIVVQKRHHTRLFQPRKEDQ---DRSGNVFPGTVVETGICHPMEWDFYLMSHGGLQGTSRPAKYHVLWDENAFDSDSLQMLCYHLCFMYCRCTRSVSIPPAVYYAHLVAFRAQFFVN 414
L ++ AI +AC+SL+ Y+P +TF+VVQKRHHTRLF +D+ DRSGN+ PGTVV++ ICHP E+DFYL SH G+QGTSRPA YHVLWDEN F +D LQ L +LC+ Y RCTRSVSI P YYAHL AFRA+F++
Sbjct: 36 LLYELDAIRKACASLEPNYQPPVTFVVVQKRHHTRLFANNHQDRNATDRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFTADGLQSLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYME 176 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig142156.2917.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig142156.2917.1 >prot_H-elongata_contig142156.2917.1 ID=prot_H-elongata_contig142156.2917.1|Name=mRNA_H-elongata_contig142156.2917.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=145bp LFEQVRAIEQACSSLQNGYRPTITFIVVQKRHHTRLFQPRKEDQDRSGNVback to top mRNA from alignment at H-elongata_contig142156:41..1342+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig142156.2917.1 ID=mRNA_H-elongata_contig142156.2917.1|Name=mRNA_H-elongata_contig142156.2917.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1302bp|location=Sequence derived from alignment at H-elongata_contig142156:41..1342+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig142156:41..1342+ >mRNA_H-elongata_contig142156.2917.1 ID=mRNA_H-elongata_contig142156.2917.1|Name=mRNA_H-elongata_contig142156.2917.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=870bp|location=Sequence derived from alignment at H-elongata_contig142156:41..1342+ (Himanthalia elongata Himel1 dioecious)back to top |