mRNA_H-elongata_contig142060.2909.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig142060.2909.1
Unique NamemRNA_H-elongata_contig142060.2909.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig142060.2909.1 vs. uniprot
Match: D7FVC8_ECTSI (DNA replication licensing factor MCM3 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FVC8_ECTSI)

HSP 1 Score: 343 bits (880), Expect = 6.670e-111
Identity = 167/182 (91.76%), Postives = 176/182 (96.70%), Query Frame = 1
Query:    1 RDRINALKGKSHARLIVDLNHLRSDGRGDLAGRIMRRPAPYMYALREAARDVALAMDPAFNKTLKDRNIHIGFEGSFGHQHISPRGLLASYLRTLVCVEGIVTKCTSVRPKLVKSVHFNPSNQTFTTREYRDSTAMELGLDSGGRGNLPTTTLYPTKDADGNPLETEYGLCRFKDHQTVTIQ 546
            RDRINALKG  H RL+VDLNHLRSDGRGDLAGRIMRRPAPYMYALREAARDVALAMDPAF KTLKDR+I IGFEGSFGHQH+SPRGLLASYLRTLVCVEGIVTKCTSVRPKLVKSVHFNPSNQ+FT+REYRDSTA+ELGLD+GGR NLPTTTLYPTKDA+G+PLETEYGLCRFKDHQTVTIQ
Sbjct:   41 RDRINALKGAKHLRLVVDLNHLRSDGRGDLAGRIMRRPAPYMYALREAARDVALAMDPAFIKTLKDRDILIGFEGSFGHQHVSPRGLLASYLRTLVCVEGIVTKCTSVRPKLVKSVHFNPSNQSFTSREYRDSTAVELGLDAGGRENLPTTTLYPTKDAEGHPLETEYGLCRFKDHQTVTIQ 222          
BLAST of mRNA_H-elongata_contig142060.2909.1 vs. uniprot
Match: A0A835Z466_9STRA (DNA replication licensing factor MCM3 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z466_9STRA)

HSP 1 Score: 202 bits (513), Expect = 2.200e-57
Identity = 101/177 (57.06%), Postives = 130/177 (73.45%), Query Frame = 1
Query:    4 DRINALKGK-SHARLIVDLNHLRSDGRGDLAGRIMRRPAPYMYALREAARDVALAMDPAFNKTLKDRNIHIGFEGSFGHQHISPRGLLASYLRTLVCVEGIVTKCTSVRPKLVKSVHFNPSNQTFTTREYRDSTAMELGLDSGGRGNLPTTTLYPTKDADGNPLETEYGLCRFKDHQ 531
            DRI  L       RL++ LNHLR +   D+A R+MRRP PYM+A REAA+++AL  DP+F K L+DR I  GFEG+FGHQH+SPR L++ +L+ LVCVEGIVTKC++VRPKL+KSVH+ P+    T REYRD T++ELGL+ GG   + T    PTKD + N LE EYGLC++KDHQ
Sbjct:   50 DRIGKLMATPKKLRLLISLNHLRKNQSLDVA-RLMRRPLPYMWAFREAAKEIALREDPSFAKVLRDREI--GFEGAFGHQHVSPRSLISHFLKMLVCVEGIVTKCSNVRPKLMKSVHYCPATGEHTQREYRDGTSLELGLEIGGTMQMVTQGGQPTKDPENNTLEVEYGLCQYKDHQ 223          
BLAST of mRNA_H-elongata_contig142060.2909.1 vs. uniprot
Match: K8Z007_NANGC (Dna replication licensing factor mcm3 (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8Z007_NANGC)

HSP 1 Score: 184 bits (467), Expect = 1.520e-55
Identity = 91/183 (49.73%), Postives = 126/183 (68.85%), Query Frame = 1
Query:    1 RDRINALKGKSHARLIVDLNHLRSDGRGDLAGRIMRRPAPYMYALREAARDVALAMDPAFNKTLKDRN-IHIGFEGSFGHQHISPRGLLASYLRTLVCVEGIVTKCTSVRPKLVKSVHFNPSNQTFTTREYRDSTAMELGLDSGGRGNLPTTTLYPTKDADGNPLETEYGLCRFKDHQTVTIQ 546
            +D I     K   R++V+LN LR     +LA R++  P  Y+ AL  A ++VA  +DP+F K L   + + +GF+G+FG  H+SPRGL +  L  LVCVEGIVTKC+ VRPK+V+SVH+ P+ Q    R+YRD+T++ +GL++GGR  LPT   YP KD DG+PLETE+GL  +KDHQ+VTIQ
Sbjct:   45 KDSIAHTLSKKGRRVVVNLNDLREFD-VELARRVITSPLEYLLALETAVKEVAQRLDPSFGKLLSQHDQLKVGFDGAFGRNHVSPRGLTSRRLAQLVCVEGIVTKCSLVRPKVVRSVHYCPAKQEHLVRDYRDATSISIGLEAGGRPMLPTNNTYPNKDKDGHPLETEFGLSTYKDHQSVTIQ 226          
BLAST of mRNA_H-elongata_contig142060.2909.1 vs. uniprot
Match: A0A7S1XKS1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XKS1_9STRA)

HSP 1 Score: 181 bits (459), Expect = 1.770e-55
Identity = 83/142 (58.45%), Postives = 109/142 (76.76%), Query Frame = 1
Query:  121 YMYALREAARDVALAMDPAFNKTLKDRNIHIGFEGSFGHQHISPRGLLASYLRTLVCVEGIVTKCTSVRPKLVKSVHFNPSNQTFTTREYRDSTAMELGLDSGGRGNLPTTTLYPTKDADGNPLETEYGLCRFKDHQTVTIQ 546
            Y+Y L  A  D A  +DPA+ KT  D+ + +GFEGSFG  H+SPRGLL+ ++ +LVCV+GIVTKC  VRPK+V+SVH+ P+ +  TTR+YRD+TA++LGL+  GR  LPT  +YPT+D +GN LETE+GLC FKDHQ VTIQ
Sbjct:    1 YIYPLMRAITDNAKDLDPAYGKTQGDKLVQVGFEGSFGEHHVSPRGLLSRFICSLVCVDGIVTKCGVVRPKVVRSVHYCPATKEHTTRDYRDATAVDLGLEVNGRPLLPTPVVYPTRDPEGNLLETEFGLCDFKDHQVVTIQ 142          
BLAST of mRNA_H-elongata_contig142060.2909.1 vs. uniprot
Match: A0A4D9D854_9STRA (DNA replication licensing factor MCM3 n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D854_9STRA)

HSP 1 Score: 183 bits (464), Expect = 2.800e-50
Identity = 90/183 (49.18%), Postives = 126/183 (68.85%), Query Frame = 1
Query:    1 RDRINALKGKSHARLIVDLNHLRSDGRGDLAGRIMRRPAPYMYALREAARDVALAMDPAFNKTLKDRN-IHIGFEGSFGHQHISPRGLLASYLRTLVCVEGIVTKCTSVRPKLVKSVHFNPSNQTFTTREYRDSTAMELGLDSGGRGNLPTTTLYPTKDADGNPLETEYGLCRFKDHQTVTIQ 546
            +D I     K   R++V+LN LR     +LA R++  P  Y+ AL  A ++V   +DP+F K L   + + +GF+G+FG  H+SPRGL +  L  LVCVEGIVTKC+ VRPK+V+SVH+ P+ Q    R+YRD+T++ +GL++GGR  LPT   YP+KD DG+PLETE+GL  +KDHQ+VTIQ
Sbjct:   45 KDSIAHTLSKKGRRVVVNLNDLREFD-VELARRVITSPLEYLLALETAVKEVTQRLDPSFGKLLSQHDQLKVGFDGAFGRNHVSPRGLTSRRLAQLVCVEGIVTKCSLVRPKVVRSVHYCPAKQEHLVRDYRDATSISIGLEAGGRPMLPTNNTYPSKDKDGHPLETEFGLSTYKDHQSVTIQ 226          
BLAST of mRNA_H-elongata_contig142060.2909.1 vs. uniprot
Match: A0A7S3M7F8_9STRA (DNA replication licensing factor MCM3 n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M7F8_9STRA)

HSP 1 Score: 181 bits (460), Expect = 6.800e-50
Identity = 89/171 (52.05%), Postives = 130/171 (76.02%), Query Frame = 1
Query:   40 RLIVDLNHLRSDGRGDLAGRIMRRPAPYMYALREAARDVALAMDPAFNKTLKDRNIHIGFEGSFGHQHISPRGLLASYLRTLVCVEGIVTKCTSVRPKLVKSVHFNPSNQTFTTREYRDSTAMELGLD-SGGRGN-LPTTTLYPTKDADGNPLETEYGLCRFKDHQTVTIQ 546
            R IVD+N LRS   G+LA +I+RRP  Y+ AL+EA  + +  +DP+F K LK  ++ +GFEGSFG   +SPRGL +S L +LV VEGI+TKC+SVRPKL++SV + P+ + ++ R+YRD+T++++G++ +GG G  LPT++  PT DADGNPLE E+GLC +KD+QT+ +Q
Sbjct:   42 RFIVDINELRSF-EGELANKIIRRPREYIVALQEAGVERSKKIDPSFEKVLKSADLQVGFEGSFGPNAVSPRGLNSSMLNSLVQVEGIITKCSSVRPKLMRSVQYCPATKLWSIRDYRDATSIDIGIEVTGGSGERLPTSSALPTSDADGNPLEIEHGLCMYKDYQTLVLQ 211          
BLAST of mRNA_H-elongata_contig142060.2909.1 vs. uniprot
Match: A0A314YEX0_PRUYE (DNA replication licensing factor MCM3 n=1 Tax=Prunus yedoensis var. nudiflora TaxID=2094558 RepID=A0A314YEX0_PRUYE)

HSP 1 Score: 167 bits (424), Expect = 1.990e-48
Identity = 85/181 (46.96%), Postives = 124/181 (68.51%), Query Frame = 1
Query:    4 DRINALKGKSHARLIVDLNHLRSDGRGDLAGRIMRRPAPYMYALREAARDVALAMDPAFNKTLKDRNIHIGFEGSFGHQHISPRGLLASYLRTLVCVEGIVTKCTSVRPKLVKSVHFNPSNQTFTTREYRDSTAMELGLDSGGRGNLPTTTLYPTKDADGNPLETEYGLCRFKDHQTVTIQ 546
            D I A+   +  RLIVD++HL S G  D+  RI+R P+ Y+ +  +AA ++A  +DP + K  +   + +GF+G F  + ++PR LL+ Y+ ++VCV GIVTKC+ VRPK+VKSVHF P+   FTTREYRD T+  +GL        PT ++YPT+D +GN L TEYGLC++KDHQT+++Q
Sbjct:   26 DEIRAIINHNRRRLIVDISHLHSYG-DDIGARILRNPSDYLQSFNDAATEIANRIDPRYLK--QGEQLLVGFQGPFVSRRVTPRDLLSEYIGSMVCVHGIVTKCSLVRPKVVKSVHFCPTTGNFTTREYRDITS-NMGL--------PTGSVYPTRDENGNLLVTEYGLCKYKDHQTLSMQ 194          
BLAST of mRNA_H-elongata_contig142060.2909.1 vs. uniprot
Match: A0A482RYX9_9ARCH (Minichromosome maintenance protein MCM n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RYX9_9ARCH)

HSP 1 Score: 169 bits (428), Expect = 5.330e-48
Identity = 85/183 (46.45%), Postives = 124/183 (67.76%), Query Frame = 1
Query:    4 DRINALKGKSHARLIVDLNHLRSDGRGDLAGRIMRRPAPYMYALREAARDVALAMDPAFNKTLKDRNIHIGFEGSFGHQHISPRGLLASYLRTLVCVEGIVTKCTSVRPKLVKSVHFNPSNQTFTTREYRDSTAMELGLD--SGGRGNLPTTTLYPTKDADGNPLETEYGLCRFKDHQTVTIQ 546
            D+I     +   R ++++N LRS    +LA RI+R+P  YM AL+EAA + A ++DPA+ K L  +++ +GFEGSFG   ISPRGL +  L TLV VEGI+ KC+SVRPKL++SV + P+   ++ REYRD+TA+++G+          PT+++ PTKD +GN LE E GLC +KD+Q V +Q
Sbjct:   30 DKIKESINEKKYRFVLNINELRSR-ETELASRILRQPREYMIALQEAASETARSLDPAYEKLLNTKDLQVGFEGSFGANSISPRGLNSRLLNTLVEVEGIIVKCSSVRPKLMRSVQYCPTTNQYSLREYRDATALDVGIKVRDDAPEKFPTSSIMPTKDVNGNVLELEPGLCSYKDYQVVVLQ 211          
BLAST of mRNA_H-elongata_contig142060.2909.1 vs. uniprot
Match: A0A251PHA3_PRUPE (DNA replication licensing factor MCM3 n=8 Tax=Prunus TaxID=3754 RepID=A0A251PHA3_PRUPE)

HSP 1 Score: 167 bits (424), Expect = 6.170e-45
Identity = 85/181 (46.96%), Postives = 124/181 (68.51%), Query Frame = 1
Query:    4 DRINALKGKSHARLIVDLNHLRSDGRGDLAGRIMRRPAPYMYALREAARDVALAMDPAFNKTLKDRNIHIGFEGSFGHQHISPRGLLASYLRTLVCVEGIVTKCTSVRPKLVKSVHFNPSNQTFTTREYRDSTAMELGLDSGGRGNLPTTTLYPTKDADGNPLETEYGLCRFKDHQTVTIQ 546
            D I A+   +  RLIVD++HL S G  D+  RI+R P+ Y+ +  +AA ++A  +DP + K  +   + +GF+G F  + ++PR LL+ Y+ ++VCV GIVTKC+ VRPK+VKSVHF P+   FTTREYRD T+  +GL        PT ++YPT+D +GN L TEYGLC++KDHQT+++Q
Sbjct:   26 DEIRAIINHNRRRLIVDISHLHSYG-DDIGARILRNPSDYLQSFNDAATEIANRIDPRYLK--QGEQLLVGFQGPFVSRRVTPRDLLSEYIGSMVCVHGIVTKCSLVRPKVVKSVHFCPTTGNFTTREYRDITS-NMGL--------PTGSVYPTRDENGNLLVTEYGLCKYKDHQTLSMQ 194          
BLAST of mRNA_H-elongata_contig142060.2909.1 vs. uniprot
Match: D7TK30_VITVI (DNA replication licensing factor MCM3 n=4 Tax=Vitis TaxID=3603 RepID=D7TK30_VITVI)

HSP 1 Score: 166 bits (421), Expect = 1.490e-44
Identity = 89/181 (49.17%), Postives = 124/181 (68.51%), Query Frame = 1
Query:    4 DRINALKGKSHARLIVDLNHLRSDGRGDLAGRIMRRPAPYMYALREAARDVALAMDPAFNKTLKDRNIHIGFEGSFGHQHISPRGLLASYLRTLVCVEGIVTKCTSVRPKLVKSVHFNPSNQTFTTREYRDSTAMELGLDSGGRGNLPTTTLYPTKDADGNPLETEYGLCRFKDHQTVTIQ 546
            D I A+      RLI++++ L  D R DLA RI++ P  YM    +AA DV+  +DP + K  +   I +GFEG F  + ++PR LL+S++ ++VCVEGIVTKC+ VRPK+VKSVHF PS+  FTTREYRD T+  +GL        PT ++YPT+D +GN L TEYGLC++KDHQT+++Q
Sbjct:   30 DEIKAMINHKRHRLILNISDLH-DYRTDLAHRILKNPGEYMQPFSDAATDVSRNLDPKYLK--EGEQILVGFEGPFVSRRVTPRDLLSSFIGSMVCVEGIVTKCSLVRPKVVKSVHFCPSSGNFTTREYRDITS-NMGL--------PTGSVYPTRDENGNLLVTEYGLCKYKDHQTLSMQ 198          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig142060.2909.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FVC8_ECTSI6.670e-11191.76DNA replication licensing factor MCM3 n=2 Tax=Ecto... [more]
A0A835Z466_9STRA2.200e-5757.06DNA replication licensing factor MCM3 n=1 Tax=Trib... [more]
K8Z007_NANGC1.520e-5549.73Dna replication licensing factor mcm3 (Fragment) n... [more]
A0A7S1XKS1_9STRA1.770e-5558.45Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
A0A4D9D854_9STRA2.800e-5049.18DNA replication licensing factor MCM3 n=1 Tax=Nann... [more]
A0A7S3M7F8_9STRA6.800e-5052.05DNA replication licensing factor MCM3 n=1 Tax=Spum... [more]
A0A314YEX0_PRUYE1.990e-4846.96DNA replication licensing factor MCM3 n=1 Tax=Prun... [more]
A0A482RYX9_9ARCH5.330e-4846.45Minichromosome maintenance protein MCM n=1 Tax=arc... [more]
A0A251PHA3_PRUPE6.170e-4546.96DNA replication licensing factor MCM3 n=8 Tax=Prun... [more]
D7TK30_VITVI1.490e-4449.17DNA replication licensing factor MCM3 n=4 Tax=Viti... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig142060contigH-elongata_contig142060:647..1658 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score345.1
Seed ortholog evalue2e-92
Seed eggNOG ortholog2880.D7FVC8
KEGG koko:K02541
KEGG Pathwayko03030,ko04110,ko04111,ko04113,map03030,map04110,map04111,map04113
KEGG ModuleM00285
EggNOG free text desc.DNA replication initiation
EggNOG OGsCOG1241@1,KOG0479@2759
EC3.6.4.12
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko03032,ko03036
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionDNA replication licensing factor Mcm3
Ec32 orthologEc-14_000620.1
Exons3
Model size561
Cds size561
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig142060.2909.1prot_H-elongata_contig142060.2909.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig142060 647..1658 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929843.838396-CDS-H-elongata_contig142060:646..8731622929843.838396-CDS-H-elongata_contig142060:646..873Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig142060 647..873 +
1691679180.2917614-CDS-H-elongata_contig142060:646..8731691679180.2917614-CDS-H-elongata_contig142060:646..873Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig142060 647..873 +
1622929843.8530412-CDS-H-elongata_contig142060:989..11961622929843.8530412-CDS-H-elongata_contig142060:989..1196Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig142060 990..1196 +
1691679180.3026931-CDS-H-elongata_contig142060:989..11961691679180.3026931-CDS-H-elongata_contig142060:989..1196Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig142060 990..1196 +
1622929843.8620343-CDS-H-elongata_contig142060:1531..16581622929843.8620343-CDS-H-elongata_contig142060:1531..1658Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig142060 1532..1658 +
1691679180.3160758-CDS-H-elongata_contig142060:1531..16581691679180.3160758-CDS-H-elongata_contig142060:1531..1658Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig142060 1532..1658 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig142060.2909.1

>prot_H-elongata_contig142060.2909.1 ID=prot_H-elongata_contig142060.2909.1|Name=mRNA_H-elongata_contig142060.2909.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=187bp
RDRINALKGKSHARLIVDLNHLRSDGRGDLAGRIMRRPAPYMYALREAAR
DVALAMDPAFNKTLKDRNIHIGFEGSFGHQHISPRGLLASYLRTLVCVEG
IVTKCTSVRPKLVKSVHFNPSNQTFTTREYRDSTAMELGLDSGGRGNLPT
TTLYPTKDADGNPLETEYGLCRFKDHQTVTIQVSTL*
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mRNA from alignment at H-elongata_contig142060:647..1658+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig142060.2909.1 ID=mRNA_H-elongata_contig142060.2909.1|Name=mRNA_H-elongata_contig142060.2909.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1012bp|location=Sequence derived from alignment at H-elongata_contig142060:647..1658+ (Himanthalia elongata Himel1 dioecious)
AGGGATCGTATCAACGCTCTCAAAGGCAAATCACATGCCAGACTAATTGT GGACCTCAACCATCTTCGATCAGATGGACGGGGTGACCTTGCTGGCCGTA TCATGCGCCGACCGGCTCCATACATGTACGCCCTTCGCGAGGCAGCTCGC GACGTTGCTCTGGCCATGGATCCTGCGTTCAACAAAACGCTTAAGGATCG AAACATCCATATAGGCTTCGAGGGCAGGTGGGTCCTGCTTACATTGTTCT GTAATCGACTCGTATCTTGTTTAATTGCGCAAAATGCGCGGCGCATGAAA TCCATATTATTTTATTTACCCATTTTATTTTCACTTACCGCAGTTTCGGT CACCAGCACATAAGCCCCAGGGGGCTACTAGCGTCTTATCTTCGCACTTT GGTATGTGTTGAGGGCATCGTGACGAAGTGCACCAGCGTCCGGCCAAAGC TGGTAAAATCGGTTCATTTCAACCCTTCCAACCAGACCTTCACGACCCGA GAATACCGGGATAGTACTGCCATGGAGCTTGGGTTGGACTCTGGCGGCAG GTGAGTACTAAATAATAGCTCTACACCCTATCTCGCTTAAGAGTTCATGA CTGTTGGTTCTGGCACTTGTATTGCTTTTGCCGCGAAGCCGTCCGGAAGC AGTACATATTTTCGTAGTCAATGCAATACCGGTACAGACCATCAAATGTT TCCGGTCATGACGTCTGCAGGCAACATAAAGTTCACGTGCGTGGCCCTAT TATAGTCAAATCGACTGTGCCACATTTTGCGTAACCGTCTCCAGAATGCT ATTGAAAGCGTCTCAACGAATATCGCGGATTGTGCTCTGAACGTTCCTAC ACCTTTGCTTCCATTCGTTAAAAACGCCAACGCAGGGGAAACCTCCCAAC GACCACCCTCTATCCTACGAAAGATGCCGATGGTAACCCCTTGGAAACGG AATACGGTTTATGCCGTTTTAAAGACCACCAGACGGTCACCATTCAGGTA AGTACTTTGTAA
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Coding sequence (CDS) from alignment at H-elongata_contig142060:647..1658+

>mRNA_H-elongata_contig142060.2909.1 ID=mRNA_H-elongata_contig142060.2909.1|Name=mRNA_H-elongata_contig142060.2909.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1122bp|location=Sequence derived from alignment at H-elongata_contig142060:647..1658+ (Himanthalia elongata Himel1 dioecious)
AGGGATCGTATCAACGCTCTCAAAGGCAAATCACATGCCAGACTAATTGT
GGACCTCAACCATCTTCGATCAGATGGACGGGGTGACCTTGCTGGCCGTA
TCATGCGCCGACCGGCTCCATACATGTACGCCCTTCGCGAGGCAGCTCGC
GACGTTGCTCTGGCCATGGATCCTGCGTTCAACAAAACGCTTAAGGATCG
AAACATCCATATAGGCTTCGAGGGCAGAGGGATCGTATCAACGCTCTCAA
AGGCAAATCACATGCCAGACTAATTGTGGACCTCAACCATCTTCGATCAG
ATGGACGGGGTGACCTTGCTGGCCGTATCATGCGCCGACCGGCTCCATAC
ATGTACGCCCTTCGCGAGGCAGCTCGCGACGTTGCTCTGGCCATGGATCC
TGCGTTCAACAAAACGCTTAAGGATCGAAACATCCATATAGGCTTCGAGG
GCAGTTTCGGTCACCAGCACATAAGCCCCAGGGGGCTACTAGCGTCTTAT
CTTCGCACTTTGGTATGTGTTGAGGGCATCGTGACGAAGTGCACCAGCGT
CCGGCCAAAGCTGGTAAAATCGGTTCATTTCAACCCTTCCAACCAGACCT
TCACGACCCGAGAATACCGGGATAGTACTGCCATGGAGCTTGGGTTGGAC
TCTGGCGGCAGTTTCGGTCACCAGCACATAAGCCCCAGGGGGCTACTAGC
GTCTTATCTTCGCACTTTGGTATGTGTTGAGGGCATCGTGACGAAGTGCA
CCAGCGTCCGGCCAAAGCTGGTAAAATCGGTTCATTTCAACCCTTCCAAC
CAGACCTTCACGACCCGAGAATACCGGGATAGTACTGCCATGGAGCTTGG
GTTGGACTCTGGCGGCAGGGGAAACCTCCCAACGACCACCCTCTATCCTA
CGAAAGATGCCGATGGTAACCCCTTGGAAACGGAATACGGTTTATGCCGT
TTTAAAGACCACCAGACGGTCACCATTCAGGTAAGTACTTTGTAAGGGAA
ACCTCCCAACGACCACCCTCTATCCTACGAAAGATGCCGATGGTAACCCC
TTGGAAACGGAATACGGTTTATGCCGTTTTAAAGACCACCAGACGGTCAC
CATTCAGGTAAGTACTTTGTAA
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