prot_H-elongata_contig142056.2908.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig142056.2908.1
Unique Nameprot_H-elongata_contig142056.2908.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length86
Homology
[Close]
BLAST of mRNA_H-elongata_contig142056.2908.1 vs. uniprot
Match: A0A6H5L3Q6_9PHAE (SAP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3Q6_9PHAE)

HSP 1 Score: 72.0 bits (175), Expect = 8.440e-13
Identity = 39/76 (51.32%), Postives = 54/76 (71.05%), Query Frame = 0 
Query:    6 SAPGDKENMPKG---NSHGTRVCEAPSSSLSVLQMRRFLRAIGQSTVGLKPALTARLDTAIASGAVKSFVESSKGR 78
            +AP DKEN          G+R  + P + +SVLQ+RRFLR IGQ T GLKP L+ARL+ A+ASGAVK+FV++++ +
Sbjct:   82 AAPVDKENASAAAVAKPAGSRASKVPPTGMSVLQLRRFLRVIGQPTSGLKPVLSARLEKAVASGAVKTFVDTARAQ 157
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig142056.2908.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5L3Q6_9PHAE8.440e-1351.32SAP domain-containing protein n=1 Tax=Ectocarpus s... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig142056contigH-elongata_contig142056:41..705 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig142056.2908.1mRNA_H-elongata_contig142056.2908.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig142056 41..706 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig142056.2908.1 ID=prot_H-elongata_contig142056.2908.1|Name=mRNA_H-elongata_contig142056.2908.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=86bp
VGGGLSAPGDKENMPKGNSHGTRVCEAPSSSLSVLQMRRFLRAIGQSTVG
LKPALTARLDTAIASGAVKSFVESSKGRKADESVVC
back to top