prot_H-elongata_contig141831.2895.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig141831.2895.1
Unique Nameprot_H-elongata_contig141831.2895.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length150
Homology
BLAST of mRNA_H-elongata_contig141831.2895.1 vs. uniprot
Match: D7G1U3_ECTSI (Aminomethyltransferase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G1U3_ECTSI)

HSP 1 Score: 265 bits (677), Expect = 1.800e-85
Identity = 127/149 (85.23%), Postives = 136/149 (91.28%), Query Frame = 0
Query:    1 MVVNGACKHGDMEHFKAQMADFKGDVHMEYMETQQLLALQGKGAPAALQTLVSSGVDVTKMPFMTGVDTPVAGIEGCRVTRCGYTGEDGYEISVPYDSAVVLAEAMLKIEGVAVSGLGARDALRLEAGLCLYGNDIDGSTNPIEAALAW 149
            MVVNGACKHGDM HFK QMADFKGDVHM+YMETQQLLALQGKGAPAALQ+L+  GVDVTKM FMTGVDT VAGIEGCRVTRCGYTGEDGYE+SVPYDSAV LAE+ L I GV V+GLGARDALRLEAGLCLYGNDID +TNP+E +LAW
Sbjct:  153 MVVNGACKHGDMAHFKEQMADFKGDVHMDYMETQQLLALQGKGAPAALQSLMPDGVDVTKMLFMTGVDTTVAGIEGCRVTRCGYTGEDGYEVSVPYDSAVALAESFLGISGVEVAGLGARDALRLEAGLCLYGNDIDATTNPVEGSLAW 301          
BLAST of mRNA_H-elongata_contig141831.2895.1 vs. uniprot
Match: A0A836CJF5_9STRA (Aminomethyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJF5_9STRA)

HSP 1 Score: 227 bits (579), Expect = 9.640e-71
Identity = 108/149 (72.48%), Postives = 125/149 (83.89%), Query Frame = 0
Query:    1 MVVNGACKHGDMEHFKAQMADFKGDVHMEYMETQQLLALQGKGAPAALQTLVSSGVDVTKMPFMTGVDTPVAGIEGCRVTRCGYTGEDGYEISVPYDSAVVLAEAMLKIEGVAVSGLGARDALRLEAGLCLYGNDIDGSTNPIEAALAW 149
            MV+NGACKH DM+HF+ +MA F GDVHMEY+  QQLLALQG GA AAL  L+ S +D+  MPFMTGVD  VAGIEGCRVTRCGYTGEDG+EISVP+  AV LA+++LK +GV  +GLGARDALRLEAGLCLYGNDID +TNP+EA LAW
Sbjct:  148 MVINGACKHSDMDHFRREMASFNGDVHMEYLAEQQLLALQGPGAAAALAPLLPSSIDLAVMPFMTGVDCKVAGIEGCRVTRCGYTGEDGFEISVPFAQAVNLAQSLLKHKGVMPTGLGARDALRLEAGLCLYGNDIDLTTNPVEAGLAW 296          
BLAST of mRNA_H-elongata_contig141831.2895.1 vs. uniprot
Match: A0A7S2XY17_9STRA (Aminomethyltransferase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XY17_9STRA)

HSP 1 Score: 212 bits (540), Expect = 6.080e-65
Identity = 107/149 (71.81%), Postives = 119/149 (79.87%), Query Frame = 0
Query:    1 MVVNGACKHGDMEHFKAQMADFKGDVHMEYMETQQLLALQGKGAPAALQTLVSSGVDVTKMPFMTGVDTPVAGIEGCRVTRCGYTGEDGYEISVPYDSAVVLAEAMLKIEGVAVSGLGARDALRLEAGLCLYGNDIDGSTNPIEAALAW 149
            MVVNGACK GDMEHF   +ADF GD  M YME  QLLALQG GA   L  LVS  +D+ KM FMTGVDT +AGIEGCRVTRCGYTGEDG+E+SVP  SAV LA+ +L+   V  +GLGARD+LRLEAGLCLYGNDIDGSTNP+EAALAW
Sbjct:  145 MVVNGACKVGDMEHFNKHLADFSGDCTMTYMEDLQLLALQGTGAAEVLAPLVS--LDLAKMNFMTGVDTTIAGIEGCRVTRCGYTGEDGFELSVPSASAVSLAQTLLQNSAVNPTGLGARDSLRLEAGLCLYGNDIDGSTNPVEAALAW 291          
BLAST of mRNA_H-elongata_contig141831.2895.1 vs. uniprot
Match: A0A7S2C7X8_9STRA (Aminomethyltransferase n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2C7X8_9STRA)

HSP 1 Score: 199 bits (507), Expect = 1.480e-60
Identity = 97/149 (65.10%), Postives = 116/149 (77.85%), Query Frame = 0
Query:    1 MVVNGACKHGDMEHFKAQMADFKGDVHMEYMETQQLLALQGKGAPAALQTLVSSGVDVTKMPFMTGVDTPVAGIEGCRVTRCGYTGEDGYEISVPYDSAVVLAEAMLKIEGVAVSGLGARDALRLEAGLCLYGNDIDGSTNPIEAALAW 149
            MVVNGACKH DM HF+ +MA F GDV MEY +   L+ALQG GA A +  LV S VD++K+ FMTG DT +AGIEGCR+TRCGYTGEDG+E+SVP D A +LA+A+L+   V  +GLGARD+LRLEAGLCLYGNDID +  PIEA L W
Sbjct:   96 MVVNGACKHKDMAHFEEEMAKFGGDVSMEYCDDLALVALQGPGATATVAKLVPSSVDLSKVDFMTGFDTTLAGIEGCRLTRCGYTGEDGFELSVPNDKAELLAQAILEDSSVLPTGLGARDSLRLEAGLCLYGNDIDDTITPIEANLTW 244          
BLAST of mRNA_H-elongata_contig141831.2895.1 vs. uniprot
Match: A0A7S1Y9F6_9STRA (Aminomethyltransferase n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1Y9F6_9STRA)

HSP 1 Score: 198 bits (504), Expect = 1.510e-59
Identity = 95/150 (63.33%), Postives = 118/150 (78.67%), Query Frame = 0
Query:    1 MVVNGACKHGDMEHFKAQMADFKGDVHMEYME-TQQLLALQGKGAPAALQTLVSSGVDVTKMPFMTGVDTPVAGIEGCRVTRCGYTGEDGYEISVPYDSAVVLAEAMLKIEGVAVSGLGARDALRLEAGLCLYGNDIDGSTNPIEAALAW 149
            MVVNGA K GDM+HF+AQMADF GDV MEY+E T QLLA+QG GA  A++ L+ S  D+  MPFMTG DT +AG+EGCR+TRCGYTGEDG+EI++P  +A+ +A  +L+   V  +GLGARD+LRLEAGLCLYGND+D +T PIE  L W
Sbjct:  142 MVVNGATKFGDMKHFEAQMADFDGDVTMEYLEDTMQLLAVQGPGAAEAIKKLLPSDFDLVNMPFMTGTDTTLAGVEGCRITRCGYTGEDGFEIAMPEAAAISIASQLLEDPAVNPTGLGARDSLRLEAGLCLYGNDLDETTTPIEGVLGW 291          
BLAST of mRNA_H-elongata_contig141831.2895.1 vs. uniprot
Match: A0A1Z5JTI5_FISSO (Aminomethyltransferase n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JTI5_FISSO)

HSP 1 Score: 193 bits (491), Expect = 1.150e-57
Identity = 92/150 (61.33%), Postives = 120/150 (80.00%), Query Frame = 0
Query:    1 MVVNGACKHGDMEHFKAQMADFKGDVHMEYME-TQQLLALQGKGAPAALQTLVSSGVDVTKMPFMTGVDTPVAGIEGCRVTRCGYTGEDGYEISVPYDSAVVLAEAMLKIEGVAVSGLGARDALRLEAGLCLYGNDIDGSTNPIEAALAW 149
            MVVNGA K GDMEHF+ QM +F GDV MEY+E + QLLA+QG GA AA+  ++ S VD++KMPFMTG+DT + G+ GCR+TRCGYTGEDG+EI++P + AV +A+ +L+   V  +GLGARD+LRLEAGLCLYG+D+D + NP+E  LAW
Sbjct:  139 MVVNGATKFGDMEHFQQQMKEFGGDVTMEYLEDSMQLLAIQGPGAAAAVSKVLPSTVDLSKMPFMTGLDTTLDGVSGCRITRCGYTGEDGFEIAMPAEYAVSIAQRLLEDATVKPTGLGARDSLRLEAGLCLYGHDLDETINPVEGGLAW 288          
BLAST of mRNA_H-elongata_contig141831.2895.1 vs. uniprot
Match: A0A7S2H2M8_9STRA (Aminomethyltransferase n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2H2M8_9STRA)

HSP 1 Score: 193 bits (491), Expect = 1.200e-57
Identity = 98/149 (65.77%), Postives = 113/149 (75.84%), Query Frame = 0
Query:    1 MVVNGACKHGDMEHFKAQMADFKGDVHMEYMETQQLLALQGKGAPAALQTLVSSGVDVTKMPFMTGVDTPVAGIEGCRVTRCGYTGEDGYEISVPYDSAVVLAEAMLKIEGVAVSGLGARDALRLEAGLCLYGNDIDGSTNPIEAALAW 149
            MVVNGACKH DM HF+  M+++  DV MEY+E QQLLALQG GA AAL  L  S +D + MPFM G +T VAGI  CRVTRCGYTGEDG+EISV Y +A  LAEA+L    V   GLGARD+LRLEAGLCLYGND+D +TNP+E AL W
Sbjct:  140 MVVNGACKHKDMAHFEKYMSEYGMDVQMEYLEDQQLLALQGPGAAAALGRLAPS-LDFSTMPFMAGTETEVAGIGACRVTRCGYTGEDGFEISVDYGNAPKLAEALLDQPEVNPCGLGARDSLRLEAGLCLYGNDLDEATNPVEGALTW 287          
BLAST of mRNA_H-elongata_contig141831.2895.1 vs. uniprot
Match: B8C809_THAPS (Aminomethyltransferase n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C809_THAPS)

HSP 1 Score: 193 bits (491), Expect = 1.570e-57
Identity = 93/150 (62.00%), Postives = 116/150 (77.33%), Query Frame = 0
Query:    1 MVVNGACKHGDMEHFKAQMADFKGDVHMEYME-TQQLLALQGKGAPAALQTLVSSGVDVTKMPFMTGVDTPVAGIEGCRVTRCGYTGEDGYEISVPYDSAVVLAEAMLKIEGVAVSGLGARDALRLEAGLCLYGNDIDGSTNPIEAALAW 149
            MVVNGA K GDM+HFK QM  F GDV+MEY+E + QLLA+QG GA  A+  L+    D+TKM FMTGVDT + G++GCR+TRCGYTGEDG+EI++P + AV +A  +L    V  +GLGARD+LRLEAGLCLYG+D+D +TNPIEA L W
Sbjct:  149 MVVNGATKFGDMKHFKEQMESFDGDVNMEYLEDSMQLLAIQGPGAAEAVSKLLPGAFDLTKMAFMTGVDTTLDGVDGCRITRCGYTGEDGFEIAMPAEHAVSIASKLLSDPSVNPTGLGARDSLRLEAGLCLYGHDLDENTNPIEATLGW 298          
BLAST of mRNA_H-elongata_contig141831.2895.1 vs. uniprot
Match: A0A7S2PM62_9STRA (Hypothetical protein (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2PM62_9STRA)

HSP 1 Score: 186 bits (473), Expect = 3.190e-57
Identity = 90/150 (60.00%), Postives = 115/150 (76.67%), Query Frame = 0
Query:    1 MVVNGACKHGDMEHFKAQMADFKGDVHMEYME-TQQLLALQGKGAPAALQTLVSSGVDVTKMPFMTGVDTPVAGIEGCRVTRCGYTGEDGYEISVPYDSAVVLAEAMLKIEGVAVSGLGARDALRLEAGLCLYGNDIDGSTNPIEAALAW 149
            MVVNGA K GDM+HF+ Q+ +F GDV MEY+E T QLLALQG GA  A+  ++ SG D+T M FMTG +  + GIEGCR+TRCGYTGEDG+EI++P D AV +A  +L+   V  +GLGARD+LRLEAGLCLYG+D++ + NP+E  LAW
Sbjct:   29 MVVNGATKFGDMKHFQQQLDEFDGDVTMEYLEDTMQLLALQGPGAADAVSKILPSGFDLTNMAFMTGTELTLDGIEGCRITRCGYTGEDGFEIAMPADHAVSIASKLLEDPSVNPTGLGARDSLRLEAGLCLYGHDLNETINPVEGTLAW 178          
BLAST of mRNA_H-elongata_contig141831.2895.1 vs. uniprot
Match: Q6U9Y5_THAWE (Aminomethyltransferase n=1 Tax=Thalassiosira weissflogii TaxID=1577725 RepID=Q6U9Y5_THAWE)

HSP 1 Score: 189 bits (481), Expect = 4.440e-56
Identity = 92/150 (61.33%), Postives = 113/150 (75.33%), Query Frame = 0
Query:    1 MVVNGACKHGDMEHFKAQMADFKGDVHMEYME-TQQLLALQGKGAPAALQTLVSSGVDVTKMPFMTGVDTPVAGIEGCRVTRCGYTGEDGYEISVPYDSAVVLAEAMLKIEGVAVSGLGARDALRLEAGLCLYGNDIDGSTNPIEAALAW 149
            MVVNGA K GDM+HFK Q+  F GDV MEY+E + QL A+QG GA  A++ L+  G D+T M FMTG DT + GIEGCR+TRCGYTGEDG+EI++P + AV +A  ++    V  +GLGARD+LRLEAGLCLYGNDID +T P EAAL W
Sbjct:  145 MVVNGATKFGDMKHFKEQLEQFDGDVSMEYLEESMQLFAVQGPGAAEAVKKLLPDGFDLTSMAFMTGTDTTLDGIEGCRITRCGYTGEDGFEIAMPAEHAVSIASKLISDPTVNPTGLGARDSLRLEAGLCLYGNDIDANTTPTEAALGW 294          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig141831.2895.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G1U3_ECTSI1.800e-8585.23Aminomethyltransferase n=2 Tax=Ectocarpus TaxID=28... [more]
A0A836CJF5_9STRA9.640e-7172.48Aminomethyltransferase n=1 Tax=Tribonema minus Tax... [more]
A0A7S2XY17_9STRA6.080e-6571.81Aminomethyltransferase n=1 Tax=Fibrocapsa japonica... [more]
A0A7S2C7X8_9STRA1.480e-6065.10Aminomethyltransferase n=1 Tax=Florenciella parvul... [more]
A0A7S1Y9F6_9STRA1.510e-5963.33Aminomethyltransferase n=1 Tax=Grammatophora ocean... [more]
A0A1Z5JTI5_FISSO1.150e-5761.33Aminomethyltransferase n=2 Tax=Fistulifera solaris... [more]
A0A7S2H2M8_9STRA1.200e-5765.77Aminomethyltransferase n=1 Tax=Dictyocha speculum ... [more]
B8C809_THAPS1.570e-5762.00Aminomethyltransferase n=1 Tax=Thalassiosira pseud... [more]
A0A7S2PM62_9STRA3.190e-5760.00Hypothetical protein (Fragment) n=1 Tax=Skeletonem... [more]
Q6U9Y5_THAWE4.440e-5661.33Aminomethyltransferase n=1 Tax=Thalassiosira weiss... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006222Aminomethyltransferase, folate-binding domainPFAMPF01571GCV_Tcoord: 1..149
e-value: 6.3E-38
score: 130.6
NoneNo IPR availableGENE3D4.10.1250.10coord: 128..149
e-value: 2.9E-9
score: 38.5
NoneNo IPR availablePANTHERPTHR43757FAMILY NOT NAMEDcoord: 1..149
NoneNo IPR availableSUPERFAMILY103025Folate-binding domaincoord: 1..149
IPR027266GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1GENE3D3.30.1360.120coord: 6..127
e-value: 3.2E-30
score: 107.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig141831contigH-elongata_contig141831:147..1357 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig141831.2895.1mRNA_H-elongata_contig141831.2895.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig141831 120..1357 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig141831.2895.1 ID=prot_H-elongata_contig141831.2895.1|Name=mRNA_H-elongata_contig141831.2895.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=150bp
MVVNGACKHGDMEHFKAQMADFKGDVHMEYMETQQLLALQGKGAPAALQT
LVSSGVDVTKMPFMTGVDTPVAGIEGCRVTRCGYTGEDGYEISVPYDSAV
VLAEAMLKIEGVAVSGLGARDALRLEAGLCLYGNDIDGSTNPIEAALAW*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006222GCV_T_N
IPR027266TrmE/GcvT_dom1