mRNA_H-elongata_contig141815.2892.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig141815.2892.1 vs. uniprot
Match: D7FZF2_ECTSI (Autophagy-related protein 9 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZF2_ECTSI) HSP 1 Score: 140 bits (354), Expect = 4.090e-37 Identity = 70/79 (88.61%), Postives = 74/79 (93.67%), Query Frame = 1
Query: 1 FRAEQSYLGPREWSPLARWTFREFNELQHFFEQRMSGSYVHANAFLMRFPRPVLASLMRVTRFFSGAVVAVLLVMTVLE 237
+ + +SYLGPREWSPLARWTFREFNELQHFFEQRMSGSYVHAN FLMRFPRPVLASLMRVTRF SG+VVAVLLVMT LE
Sbjct: 305 WHSSKSYLGPREWSPLARWTFREFNELQHFFEQRMSGSYVHANTFLMRFPRPVLASLMRVTRFVSGSVVAVLLVMTFLE 383
BLAST of mRNA_H-elongata_contig141815.2892.1 vs. uniprot
Match: A0A6H5K9U8_9PHAE (Autophagy-related protein 9 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9U8_9PHAE) HSP 1 Score: 139 bits (351), Expect = 1.000e-36 Identity = 69/79 (87.34%), Postives = 74/79 (93.67%), Query Frame = 1
Query: 1 FRAEQSYLGPREWSPLARWTFREFNELQHFFEQRMSGSYVHANAFLMRFPRPVLASLMRVTRFFSGAVVAVLLVMTVLE 237
+ + +SYLGPREWSPLARWTFREFNELQHFFEQRMSGSYVHAN FLMRFPRPVLAS+MRVTRF SG+VVAVLLVMT LE
Sbjct: 296 WHSSKSYLGPREWSPLARWTFREFNELQHFFEQRMSGSYVHANTFLMRFPRPVLASVMRVTRFVSGSVVAVLLVMTFLE 374
BLAST of mRNA_H-elongata_contig141815.2892.1 vs. uniprot
Match: A0A836CNL2_9STRA (Autophagy protein Apg9-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CNL2_9STRA) HSP 1 Score: 108 bits (271), Expect = 6.610e-26 Identity = 52/79 (65.82%), Postives = 61/79 (77.22%), Query Frame = 1
Query: 1 FRAEQSYLGPREWSPLARWTFREFNELQHFFEQRMSGSYVHANAFLMRFPRPVLASLMRVTRFFSGAVVAVLLVMTVLE 237
+ A + YLGPREWSPLA WTFREFNELQH +++RM+GSY HANA+L FP P+ S MR RF SGA VAVLLV T +E
Sbjct: 482 WHASKDYLGPREWSPLANWTFREFNELQHIYDRRMAGSYRHANAYLSAFPAPIWGSAMRTLRFISGAFVAVLLVATAME 560
BLAST of mRNA_H-elongata_contig141815.2892.1 vs. uniprot
Match: A0A7S3XNV8_HETAK (Autophagy-related protein 9 (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XNV8_HETAK) HSP 1 Score: 92.8 bits (229), Expect = 2.890e-20 Identity = 45/79 (56.96%), Postives = 59/79 (74.68%), Query Frame = 1
Query: 1 FRAEQSYLGPREWSPLARWTFREFNELQHFFEQRMSGSYVHANAFLMRFPRPVLASLMRVTRFFSGAVVAVLLVMTVLE 237
+ AE SYLGPREWS ARW FREFNEL HFFE+RM+GSY +AN +L +F P+ R RF SGA++ VLL++T+++
Sbjct: 439 WHAEGSYLGPREWSNYARWAFREFNELPHFFERRMAGSYKYANLYLAQFSSPLAQLAARGVRFVSGALLTVLLLLTLID 517
BLAST of mRNA_H-elongata_contig141815.2892.1 vs. uniprot
Match: F0YN89_AURAN (Autophagy-related protein 9 n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YN89_AURAN) HSP 1 Score: 86.7 bits (213), Expect = 4.470e-18 Identity = 42/70 (60.00%), Postives = 54/70 (77.14%), Query Frame = 1
Query: 10 EQSYLGPREWSPLARWTFREFNELQHFFEQRMSGSYVHANAFLMRFPRPVLASLMRVTRFFSGAVVAVLL 219
++ YLGPREWSP+A+W+FRE NEL H FE R++ S ANA++ FPRPV+A+L R F SGA+VAVLL
Sbjct: 285 KKHYLGPREWSPVAQWSFRELNELPHVFETRLAASRKPANAYVSLFPRPVVATLARCVAFVSGALVAVLL 354
BLAST of mRNA_H-elongata_contig141815.2892.1 vs. uniprot
Match: I2CRC3_NANGC (Autophagy-related protein 9 (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CRC3_NANGC) HSP 1 Score: 81.6 bits (200), Expect = 4.920e-17 Identity = 38/79 (48.10%), Postives = 58/79 (73.42%), Query Frame = 1
Query: 1 FRAEQSYLGPREWSPLARWTFREFNELQHFFEQRMSGSYVHANAFLMRFPRPVLASLMRVTRFFSGAVVAVLLVMTVLE 237
++ +++YLGPR+WSPLA+W FRE+NEL H FE+R+ S+ A + + PRPVL L R + +G+VVAVLL+ T+++
Sbjct: 53 WQQKKNYLGPRQWSPLAQWRFREYNELPHLFERRLRASHPFAALYTRQTPRPVLGVLARCLAYMTGSVVAVLLLFTLVD 131
BLAST of mRNA_H-elongata_contig141815.2892.1 vs. uniprot
Match: W7TMH9_9STRA (Autophagy-related protein 9 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TMH9_9STRA) HSP 1 Score: 82.8 bits (203), Expect = 1.020e-16 Identity = 38/79 (48.10%), Postives = 59/79 (74.68%), Query Frame = 1
Query: 1 FRAEQSYLGPREWSPLARWTFREFNELQHFFEQRMSGSYVHANAFLMRFPRPVLASLMRVTRFFSGAVVAVLLVMTVLE 237
++ +++YLGPR+WSPLA+W FRE+NEL H FE+R+ S+ +A + + PRPVL L R + +G+VVAVLL+ T+++
Sbjct: 442 WQQKKNYLGPRQWSPLAQWRFREYNELPHLFERRLRASHPYAALYTRQTPRPVLGVLARCLAYMTGSVVAVLLLFTLVD 520
BLAST of mRNA_H-elongata_contig141815.2892.1 vs. uniprot
Match: A0A4D9D5X3_9STRA (Autophagy-related protein 9 n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D5X3_9STRA) HSP 1 Score: 82.8 bits (203), Expect = 1.030e-16 Identity = 38/79 (48.10%), Postives = 59/79 (74.68%), Query Frame = 1
Query: 1 FRAEQSYLGPREWSPLARWTFREFNELQHFFEQRMSGSYVHANAFLMRFPRPVLASLMRVTRFFSGAVVAVLLVMTVLE 237
++ +++YLGPR+WSPLA+W FRE+NEL H FE+R+ S+ +A + + PRPVL L R + +G+VVAVLL+ T+++
Sbjct: 438 WQQKKNYLGPRQWSPLAQWRFREYNELPHLFERRLRASHPYAALYTRQTPRPVLGVLARCLAYMTGSVVAVLLLFTLVD 516
BLAST of mRNA_H-elongata_contig141815.2892.1 vs. uniprot
Match: A0A6S8BVW5_9STRA (Autophagy-related protein 9 n=2 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A6S8BVW5_9STRA) HSP 1 Score: 82.0 bits (201), Expect = 1.900e-16 Identity = 38/79 (48.10%), Postives = 55/79 (69.62%), Query Frame = 1
Query: 1 FRAEQSYLGPREWSPLARWTFREFNELQHFFEQRMSGSYVHANAFLMRFPRPVLASLMRVTRFFSGAVVAVLLVMTVLE 237
F +Q+YLGPR WSP + W FREFNEL+HFFE+R S HA+A++ +FP P+ ++ F SG+ + VLL+ T+L+
Sbjct: 382 FHLKQNYLGPRGWSPHSLWQFREFNELEHFFERRTRASMKHADAYIKQFPTPIPTTIASGISFISGSFLGVLLLFTLLD 460
BLAST of mRNA_H-elongata_contig141815.2892.1 vs. uniprot
Match: A0A7S1U8L1_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U8L1_9STRA) HSP 1 Score: 82.0 bits (201), Expect = 1.930e-16 Identity = 43/79 (54.43%), Postives = 57/79 (72.15%), Query Frame = 1
Query: 1 FRAEQSYLGPREWSPLARWTFREFNELQHFFEQRMSGSYVHANAFLMRFPRPVLASLMRVTRFFSGAVVAVLLVMTVLE 237
+RA +YLGPREWSPLAR FREFNEL H FE+R++ + A + F RP+LA+ R+ F SGA+VAVLLV T+++
Sbjct: 390 WRASNNYLGPREWSPLARCMFREFNELPHVFEERLARTIGPATDYQGSFSRPLLATAGRLLSFISGALVAVLLVFTLMD 468 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig141815.2892.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig141815.2892.1 >prot_H-elongata_contig141815.2892.1 ID=prot_H-elongata_contig141815.2892.1|Name=mRNA_H-elongata_contig141815.2892.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=79bp FRAEQSYLGPREWSPLARWTFREFNELQHFFEQRMSGSYVHANAFLMRFPback to top mRNA from alignment at H-elongata_contig141815:225..1433- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig141815.2892.1 ID=mRNA_H-elongata_contig141815.2892.1|Name=mRNA_H-elongata_contig141815.2892.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1209bp|location=Sequence derived from alignment at H-elongata_contig141815:225..1433- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig141815:225..1433- >mRNA_H-elongata_contig141815.2892.1 ID=mRNA_H-elongata_contig141815.2892.1|Name=mRNA_H-elongata_contig141815.2892.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=474bp|location=Sequence derived from alignment at H-elongata_contig141815:225..1433- (Himanthalia elongata Himel1 dioecious)back to top |