prot_H-elongata_contig141455.2879.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig141455.2879.1
Unique Nameprot_H-elongata_contig141455.2879.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length61
Homology
BLAST of mRNA_H-elongata_contig141455.2879.1 vs. uniprot
Match: D7FQI2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQI2_ECTSI)

HSP 1 Score: 95.9 bits (237), Expect = 7.240e-22
Identity = 41/61 (67.21%), Postives = 51/61 (83.61%), Query Frame = 0
Query:    1 VSVANPDRFQCPLREEERFSLPDTRNRMVERDFKEGRGFIYYQHLRKAGGTGFCEMAGRRV 61
            +++ +PDRF+CP  E +RFSLPD R+ + E+DFK G GFIYYQHLRKAGGTGFCEMAGR +
Sbjct:   90 IAMDSPDRFRCPASEADRFSLPDIRDHVREKDFKSGEGFIYYQHLRKAGGTGFCEMAGRNM 150          
BLAST of mRNA_H-elongata_contig141455.2879.1 vs. uniprot
Match: D7G8S3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8S3_ECTSI)

HSP 1 Score: 93.6 bits (231), Expect = 5.160e-21
Identity = 42/61 (68.85%), Postives = 49/61 (80.33%), Query Frame = 0
Query:    1 VSVANPDRFQCPLREEERFSLPDTRNRMVERDFKEGRGFIYYQHLRKAGGTGFCEMAGRRV 61
            ++V +PDRFQCP  E +RFSLPD R+   E+ FK G GFIYYQHLRKAGGTGFCEMAGR +
Sbjct:   94 IAVDSPDRFQCPAIEADRFSLPDIRDHHQEKYFKSGEGFIYYQHLRKAGGTGFCEMAGRNM 154          
BLAST of mRNA_H-elongata_contig141455.2879.1 vs. uniprot
Match: A0A6H5KG32_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KG32_9PHAE)

HSP 1 Score: 88.6 bits (218), Expect = 1.440e-19
Identity = 40/52 (76.92%), Postives = 43/52 (82.69%), Query Frame = 0
Query:    9 FQCPLREEERFSLPDTRNRMVERDFKEGRGFIYYQHLRKAGGTGFCEMAGRR 60
            FQCP  E +RFSLPD R+   E+DFK G GFIYYQHLRKAGGTGFCEMAGRR
Sbjct:   80 FQCPATEADRFSLPDIRDHEREKDFKSGEGFIYYQHLRKAGGTGFCEMAGRR 131          
BLAST of mRNA_H-elongata_contig141455.2879.1 vs. uniprot
Match: A0A6H5L1N0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1N0_9PHAE)

HSP 1 Score: 87.4 bits (215), Expect = 1.140e-18
Identity = 40/61 (65.57%), Postives = 48/61 (78.69%), Query Frame = 0
Query:    1 VSVANPDRFQCPLREEERFSLPDTRNRMVERDFKEGRGFIYYQHLRKAGGTGFCEMAGRRV 61
            V+V +PD+F+CP RE +RFS PD R+   E  FK GRGFIYYQHLRKAGGT FC+MA R+V
Sbjct:  607 VAVDSPDKFECPDREADRFSSPDIRDHDDEEAFKAGRGFIYYQHLRKAGGTAFCDMASRQV 667          
BLAST of mRNA_H-elongata_contig141455.2879.1 vs. uniprot
Match: D7FK39_ECTSI (WSC domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK39_ECTSI)

HSP 1 Score: 85.9 bits (211), Expect = 3.980e-18
Identity = 38/61 (62.30%), Postives = 48/61 (78.69%), Query Frame = 0
Query:    1 VSVANPDRFQCPLREEERFSLPDTRNRMVERDFKEGRGFIYYQHLRKAGGTGFCEMAGRRV 61
            V+V +PD+F+CP RE +RFSLPD R+   E  FK G+GF+YYQHLRKAGGT FC+MA R +
Sbjct:  539 VAVDSPDKFECPDREADRFSLPDIRDHDNEEAFKAGQGFLYYQHLRKAGGTAFCDMASRNM 599          
BLAST of mRNA_H-elongata_contig141455.2879.1 vs. uniprot
Match: W7TRT1_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TRT1_9STRA)

HSP 1 Score: 66.6 bits (161), Expect = 2.350e-11
Identity = 31/61 (50.82%), Postives = 39/61 (63.93%), Query Frame = 0
Query:    1 VSVANPDRFQCPLREEERFSLPDTRNRMVERDFKEGRGFIYYQHLRKAGGTGFCEMAGRRV 61
            V+V  P  F CP    ER + PD R   V   F+ G GF+++QHLRKAGGTGFC+MA R +
Sbjct:  279 VNVGGPTNFTCPP-PSERLTQPDLRRIEVATQFRGGHGFVFFQHLRKAGGTGFCDMASRNM 338          
BLAST of mRNA_H-elongata_contig141455.2879.1 vs. uniprot
Match: A0A7S1YI37_9STRA (Hypothetical protein (Fragment) n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1YI37_9STRA)

HSP 1 Score: 61.6 bits (148), Expect = 2.100e-10
Identity = 27/51 (52.94%), Postives = 38/51 (74.51%), Query Frame = 0
Query:    7 DRFQCPLREEERFSLPDTRNRMVERDFKEGRGFIYYQHLRKAGGTGFCEMA 57
            D F CP   + R SLPD R+++  ++F+ G+GF+Y+QHLRKAGGT FC +A
Sbjct:   26 DIFPCPR--DARISLPDRRDKVKAQNFRNGQGFLYFQHLRKAGGTNFCTLA 74          
BLAST of mRNA_H-elongata_contig141455.2879.1 vs. uniprot
Match: A0A7S2HZR1_9EUKA (Hypothetical protein n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2HZR1_9EUKA)

HSP 1 Score: 55.5 bits (132), Expect = 1.950e-7
Identity = 25/48 (52.08%), Postives = 32/48 (66.67%), Query Frame = 0
Query:    9 FQCPLREEERFSLPDTRNRMVERDFKEGRGFIYYQHLRKAGGTGFCEM 56
            F+CP   + RF+ PD RN      FK+G G +YYQHLRKAGG+ FC +
Sbjct:   44 FRCPR--QGRFATPDQRNASRRSRFKQGDGLLYYQHLRKAGGSSFCAL 89          
BLAST of mRNA_H-elongata_contig141455.2879.1 vs. uniprot
Match: A0A7S1CUU6_9STRA (Hypothetical protein n=3 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S1CUU6_9STRA)

HSP 1 Score: 54.7 bits (130), Expect = 3.800e-7
Identity = 27/57 (47.37%), Postives = 38/57 (66.67%), Query Frame = 0
Query:    7 DRFQCPLREEERFSLPDTRNRMVERDFKEGRG--FIYYQHLRKAGGTGFCEMAGRRV 61
            D F CP R  ER +LPD R     +DF++G+   F+++QHLRKAGGT FC +A + +
Sbjct:  185 DIFPCP-RLGERITLPDARVEQKAKDFRDGKDGTFLFFQHLRKAGGTNFCSLAEKNL 240          
BLAST of mRNA_H-elongata_contig141455.2879.1 vs. uniprot
Match: A0A448ZLP9_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZLP9_9STRA)

HSP 1 Score: 53.9 bits (128), Expect = 7.100e-7
Identity = 26/51 (50.98%), Postives = 33/51 (64.71%), Query Frame = 0
Query:    9 FQCPLREEERFSLPDTRNRMVERDFKEGRG--FIYYQHLRKAGGTGFCEMA 57
            F CP  E ER +LPD RN    + F+ G    F+++QHLRKAGGT FC +A
Sbjct:  154 FPCPGNEGERITLPDQRNHDKAQAFRNGTEPYFLFFQHLRKAGGTNFCTLA 204          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig141455.2879.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 17
Match NameE-valueIdentityDescription
D7FQI2_ECTSI7.240e-2267.21Uncharacterized protein n=2 Tax=Ectocarpus silicul... [more]
D7G8S3_ECTSI5.160e-2168.85Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KG32_9PHAE1.440e-1976.92Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L1N0_9PHAE1.140e-1865.57Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FK39_ECTSI3.980e-1862.30WSC domain-containing protein n=1 Tax=Ectocarpus s... [more]
W7TRT1_9STRA2.350e-1150.82Uncharacterized protein n=2 Tax=Monodopsidaceae Ta... [more]
A0A7S1YI37_9STRA2.100e-1052.94Hypothetical protein (Fragment) n=1 Tax=Grammatoph... [more]
A0A7S2HZR1_9EUKA1.950e-752.08Hypothetical protein n=1 Tax=Haptolina brevifila T... [more]
A0A7S1CUU6_9STRA3.800e-747.37Hypothetical protein n=3 Tax=Skeletonema marinoi T... [more]
A0A448ZLP9_9STRA7.100e-750.98Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig141455contigH-elongata_contig141455:954..1136 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig141455.2879.1mRNA_H-elongata_contig141455.2879.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig141455 954..1136 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig141455.2879.1 ID=prot_H-elongata_contig141455.2879.1|Name=mRNA_H-elongata_contig141455.2879.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=61bp
VSVANPDRFQCPLREEERFSLPDTRNRMVERDFKEGRGFIYYQHLRKAGG
TGFCEMAGRRV
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