prot_H-elongata_contig14145.2878.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig14145.2878.1
Unique Nameprot_H-elongata_contig14145.2878.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length275
Homology
BLAST of mRNA_H-elongata_contig14145.2878.1 vs. uniprot
Match: A0A6H5KKK8_9PHAE (ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKK8_9PHAE)

HSP 1 Score: 426 bits (1095), Expect = 3.410e-134
Identity = 198/274 (72.26%), Postives = 236/274 (86.13%), Query Frame = 0
Query:    1 KQLTATWQNRREILTAVGRHVFVGIFYGTLWWRLGLGKVYERIGVIFFSLVFVMIGNQQNIPRIFFDRLLFYREKGAGVYGAVEYWWSIGLAQLPLAVLNTCIYGSLLYFLAGFHNDTWKPFAYFMLVIILCNLIGLAFCQMLAAATRTQDTAVSLFPISLFFFIAFAGFIVRLPTLPDYLASWAPTISFARWAMEGLVINEFRGNEEAIFPVPEGIPITPEQIYGAFLEAYGFGKVGDGGEILGWVLWILLGNLVLFRLLGLLCLKYVTFERR 274
            ++L  TWQ++  I  ++GRH FVG FYG LWWRLG+G+VYER+GVIFFSLVFVM+GNQQNIPRIF DRLLFYREKGAGVYGAVEYWWSI +AQ+PLAVL T  YG  +YF++G +++ W+PF YF+LVI+LCNL+ L+FCQMLAAATR QDTAVSLFP+ LFFFIAF G IVRLPTLP YL +WAPTISF RWAMEGLVINEF GNE+ IFP PEG+PITPEQIY +FLEAYGFG+ G+  ++LG VLWIL+ +LV+FRLL L+ LKY++FERR
Sbjct: 1533 RELVTTWQDKARIFQSLGRHAFVGAFYGALWWRLGVGRVYERVGVIFFSLVFVMLGNQQNIPRIFQDRLLFYREKGAGVYGAVEYWWSIVIAQIPLAVLTTATYGGFVYFMSGLNHNGWEPFGYFLLVIVLCNLVALSFCQMLAAATRLQDTAVSLFPVFLFFFIAFGGMIVRLPTLPSYLHAWAPTISFVRWAMEGLVINEFEGNEDYIFPAPEGVPITPEQIYESFLEAYGFGQRGNHSDVLGQVLWILVASLVMFRLLTLIGLKYISFERR 1806          
BLAST of mRNA_H-elongata_contig14145.2878.1 vs. uniprot
Match: D8LSM1_ECTSI (ABC transporter domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSM1_ECTSI)

HSP 1 Score: 420 bits (1080), Expect = 7.050e-134
Identity = 196/274 (71.53%), Postives = 232/274 (84.67%), Query Frame = 0
Query:    1 KQLTATWQNRREILTAVGRHVFVGIFYGTLWWRLGLGKVYERIGVIFFSLVFVMIGNQQNIPRIFFDRLLFYREKGAGVYGAVEYWWSIGLAQLPLAVLNTCIYGSLLYFLAGFHNDTWKPFAYFMLVIILCNLIGLAFCQMLAAATRTQDTAVSLFPISLFFFIAFAGFIVRLPTLPDYLASWAPTISFARWAMEGLVINEFRGNEEAIFPVPEGIPITPEQIYGAFLEAYGFGKVGDGGEILGWVLWILLGNLVLFRLLGLLCLKYVTFERR 274
            ++L  TWQ++  I  ++GRH FVG FYG LWWRLG+G+VYER+GVIFFSLVFVM+GNQQNIPRIF DRLLFYREKGAGVYGAVEYWWSI +AQ+PLAVL T  YG  +YF++G +++ W+PF YF+LVI+LCNL+ L+FCQMLAA TR QDTAVSLFP+ LFFFIAF G IVRLPTLP YL +WAPTISF RWAMEGLVINEF GNE  IFP PEG PI+PE IY +FLEAYGFG+ G+  ++LG VLWIL+ +LV+FRLL L+ LKY+TFERR
Sbjct: 1141 RELVTTWQDKARIFQSLGRHAFVGAFYGALWWRLGVGRVYERVGVIFFSLVFVMLGNQQNIPRIFQDRLLFYREKGAGVYGAVEYWWSIVIAQIPLAVLTTATYGGFVYFMSGLNHNGWEPFGYFLLVIVLCNLVALSFCQMLAAGTRLQDTAVSLFPVFLFFFIAFGGMIVRLPTLPSYLHAWAPTISFVRWAMEGLVINEFEGNENYIFPAPEGTPISPEDIYESFLEAYGFGQRGNHSDVLGQVLWILVASLVMFRLLTLIGLKYITFERR 1414          
BLAST of mRNA_H-elongata_contig14145.2878.1 vs. uniprot
Match: W7TLH8_9STRA (Abc transporter g family member 29 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TLH8_9STRA)

HSP 1 Score: 221 bits (563), Expect = 5.280e-62
Identity = 116/274 (42.34%), Postives = 170/274 (62.04%), Query Frame = 0
Query:    1 KQLTATWQNRREILTAVGRHVFVGIFYGTLWWRLGLGKVYERIGVIFFSLVFVMIGNQQNIPRIFFDRLLFYREKGAGVYGAVEYWWSIGLAQLPLAVLNTCIYGSLLYFLAGFHNDTWKPFAYFMLVIILCNLIGLAFCQMLAAATRTQDTAVSLFPISLFFFIAFAGFIVRLPTLPDYLASWAPTISFARWAMEGLVINEFRGNEEAIFPVPEGIPITPEQIYGAFLEAYGFGKVGDGGEILGWVLWILLGNLVLFRLLGLLCLKYVTFERR 274
            +Q     +NRR ++  + RHV V +FYG+L+W++    +  R+ ++FF+++FVM+GNQQ+IP ++ DRLL+YREKGA VYG   YW +   + +P  +LNT +Y  ++Y +AG H++ +  F YF LV +LC+L  L FCQ+L+       TAV++FP SLF F+ FAGFIVRLP+LP ++ +W P  SFARWA +GLVINE  GN    +     +  +P   Y   +   GF      G    + + ILL N+VLFR L  L L ++  E R
Sbjct: 1005 RQFLKMRRNRRLVVVGLIRHVLVALFYGSLYWQVAPTAIQSRLSLLFFAIMFVMLGNQQSIPAVYEDRLLYYREKGAHVYGPYSYWMTCAASFIPQIILNTLLYSGIMYPMAGLHSN-FACFGYFYLVTMLCSLCALFFCQLLSITLPNPQTAVAVFPASLFIFVLFAGFIVRLPSLPSWIGAWCPDASFARWAFQGLVINELDGNARVSYKDLPAVYYSPNP-YQTMMSNLGF-----QGYSKWFTVPILLLNMVLFRGLTYLSLIFINHESR 1271          
BLAST of mRNA_H-elongata_contig14145.2878.1 vs. uniprot
Match: A0A482RNU1_9ARCH (ABC2_membrane domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RNU1_9ARCH)

HSP 1 Score: 180 bits (456), Expect = 6.260e-52
Identity = 98/271 (36.16%), Postives = 161/271 (59.41%), Query Frame = 0
Query:    8 QNRREILTAVGRHVFVGIFYGTLWWRLGLGKVYE----RIGVIFFSLVFVMIGNQQNIPRIFFDRLLFYREKGAGVYGAVEYWWSIGLAQLPLAVLNTCIYGSLLYFLAGFHNDTWKPFAYFMLVIILCNLIGLAFCQMLAAATRTQDTAVSLFPISLFFFIAFAGFIVRLPTLPDYLASWAPTISFARWAMEGLVINEFRGNEEAIFPVPEGIPITPEQIYGAFLEAYGFGKVGDGGEILGWVLWILLGNLVLFRLLGLLCLKYVTFERR 274
            ++R+  + A  RHV VG+FYG+++++L  G        R G+ FFSL+F++IG+QQ IP    +RL+FYRE+GA  YGA  YW S  L Q+PL V N   Y  + Y++ G  +++ K F YF +++++C++ GL     ++A + +   A+S FP+ +FF ++FAGF++ LP  P +L +WAP IS+ R+AM+GL +NEF+ N++        +P+    I+   L      KV     ++ ++L        L+ L+ L  LK++ FE R
Sbjct:   28 RDRKATVVATFRHVLVGLFYGSIYYQLSGGSTSSAYSNRSGIFFFSLLFMIIGHQQAIPTFLEERLVFYRERGAKAYGAFPYWISTWLLQIPLIVFNVFWYSLICYYMVGLKDES-KAFGYFFVIMMMCSITGLFNAGFVSAISASTQIALSFFPVVMFFAVSFAGFLIYLPQFPPWLGNWAPYISYMRYAMQGLTVNEFQSNDD--------LPLGESYIHE--LGYQHLNKVQCATIMIPFIL--------LYALMFLAALKFIDFEER 279          
BLAST of mRNA_H-elongata_contig14145.2878.1 vs. uniprot
Match: A0A482S1F1_9ARCH (ABC2_membrane domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S1F1_9ARCH)

HSP 1 Score: 143 bits (361), Expect = 4.090e-38
Identity = 73/194 (37.63%), Postives = 120/194 (61.86%), Query Frame = 0
Query:   19 RHVFVGIFYGTLWWRLGLGKVY----ERIGVIFFSLVFVMIGNQQNIPRIFFDRLLFYREKGAGVYGAVEYWWSIGLAQLPLAVLNTCIYGSLLYFLAGFHNDTWKPFAYFMLVIILCNLIGLAFCQMLAAATRTQDTAVSLFPISLFFFIAFAGFIVRLPTLPDYLASWAPTISFARWAMEGLVINEFRGNEE 208
            RHV  G+F+GT++++   G  +     R+ V+FFSL+FV++ +  +I  +  DR  +YRE+   VY A+ YW S+ L Q+P  V+N  +Y S +Y+L G   +  + F +F+ ++++ + +G+  CQ+LA+ + +   AVSLFP+SLFF  AF GFIV +P  P +L  W    S+ R+  + LV+NEF  N +
Sbjct:   11 RHVITGLFFGTVFYQQSGGVDFTAYNNRLSVLFFSLLFVLMSHLIDIANMLQDRPYYYRERS--VYDALAYWLSVTLVQIPFNVINVALYSSTVYYLVGLRAEA-QYFCFFLYILLMADFVGMMVCQILASVSSSAQVAVSLFPVSLFFCTAFEGFIVYIPAFPPWLG-WLSFASYLRYGFQALVLNEFDDNND 200          
BLAST of mRNA_H-elongata_contig14145.2878.1 vs. uniprot
Match: A0A482SY90_9ARCH (ABC2_membrane domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SY90_9ARCH)

HSP 1 Score: 127 bits (320), Expect = 4.510e-32
Identity = 85/269 (31.60%), Postives = 139/269 (51.67%), Query Frame = 0
Query:   14 LTAVGRHVFVGIFYGTLWWRLGLG---KVYE-RIGVIFFSLVFVMIGNQQNIPRIFFDRLLFYREKGAGVYGAVEYWWSIGLAQLPLAVLNTCIYGSLLYFLAGFHNDTWKPFAYFMLVIILCNLIGLAFCQMLAAATRTQDTAVSLFPISLFFFIAFAGFIVRLPTLPDYLASWAPTISFARWAMEGLVINEFRGNEEAIFPVPEGIPITPEQIYGAFLEAYGFGKVGDGGEILGW----VLWILLGNLVLFRLLGLLCLKYVTFERR 274
            L  V RH  +G+FYGT++++   G     Y  R+ ++FFSL+FV++ +Q++I  I  DR  FYRE+   VY    YW +  L Q+P  + N  +Y  L+YF+ GF  D    F +F  ++++ ++IG+  CQ+++  +     A+SLFP+SLFF  AF GFIV +P+               R++ + LV+NE   N +        +P+        ++E  GF  +        W    VLWI +   ++    G   L++V FE+R
Sbjct:    3 LLFVIRHTLIGLFYGTVYYQQPNGTDTSAYNNRLSMLFFSLLFVLMSHQEDIANIIEDRAFFYRERS--VYSPFAYWLANLLVQIPFNIFNVTVYSLLVYFMVGFRPDVMH-FLFFWYIMLMTDVIGMMVCQVVSNCSSNAQVAMSLFPVSLFFSTAFEGFIVFIPSXXXXXXXXXXXXXX-RYSFQALVLNELGHNSK--------LPLAS-----TYIEQLGFDSLSK------WQCADVLWIFVATALVS---GYSVLRFVNFEKR 245          
BLAST of mRNA_H-elongata_contig14145.2878.1 vs. uniprot
Match: A0A225UUJ8_9STRA (ABC transporter (Fragment) n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225UUJ8_9STRA)

HSP 1 Score: 124 bits (311), Expect = 2.160e-28
Identity = 86/278 (30.94%), Postives = 148/278 (53.24%), Query Frame = 0
Query:    1 KQLTATWQNRREILTAVGRHVFVGIFYGTLWWRLGLGKVYERIGVIFFSLVFVMIGNQQNIPRIFFDRLLFYREKGAGVYGAVEYWWSIGLAQLPLAVLNTCIYGSLLYFLAGFHNDTWKPFAYFMLVIILCNLIGLAFCQMLAAATRTQDTAVSLFPISLFFFIAFAGFIVRLPTLPDYLASWAPTISFARWAMEGLVINEFRGNEEAIFPVPEGIPITPEQIYGAFLEAYGFGKVGDGGEILGWVLWILLGNL------VLFRLLGLLCLKYVTFE 272
            +QL  T++N+  I   +     +G+ + T+++     +V   +GVIF +++F+ +G    IP    +R +FY+++GA  +    Y  +  ++Q+PLA++ T I+GSL+Y+L GF ++ +K F  F L+++L NL    +   L+A  R  D A  L  +S+  F+ FAGFIV    +PDYL  WA  IS   W+++ L IN++R     +  + +G+    E  YG  +  Y  G  G   E      WI+ G +      V+F  L  L L+++ +E
Sbjct:  357 RQLMVTYRNKPFIFGRLLMIFIMGLLFCTVFYDFDPTQVSVVMGVIFATVMFLSMGQSSQIPTYMAERDVFYKQRGANFFRTGSYVLATSVSQIPLAIVETIIFGSLVYWLCGFVSE-FKLFVIFELILLLSNLAMGMWFFFLSAIGRNGDIATPLGMVSVLVFVIFAGFIVTKSQIPDYLI-WAHWISPMTWSLKALAINQYRSGPMDVC-LYDGVDYCTE--YGLKMGEYYLGLFGMDTE----KEWIVYGIIYTAAMYVVFMFLSYLALEFIRYE 625          
BLAST of mRNA_H-elongata_contig14145.2878.1 vs. uniprot
Match: A0A6A4E8W1_9STRA (ABC transporter G family member 34 n=1 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A4E8W1_9STRA)

HSP 1 Score: 124 bits (311), Expect = 2.490e-28
Identity = 86/275 (31.27%), Postives = 147/275 (53.45%), Query Frame = 0
Query:    1 KQLTATWQNRREILTAVGRHVFVGIFYGTLWWRLGLGKVYERIGVIFFSLVFVMIGNQQNIPRIFFDRLLFYREKGAGVYGAVEYWWSIGLAQLPLAVLNTCIYGSLLYFLAGFHNDTWKPFAYFMLVIILCNLIGLAFCQMLAAATRTQDTAVSLFPISLFFFIAFAGFIVRLPTLPDYLASWAPTISFARWAMEGLVINEFRGNEEAIFPVPEGIPITPEQIYGAFLEAYGFGKVGDGGEILGWVLWILLGNL---VLFRLLGLLCLKYVTFE 272
            +QL  T++N+  I   +     +G+ + T+++     +V   +GVIF +++F+ +G    IP    +R +FY+++GA  +    Y  +  ++Q+PLAV+   I+GSL+Y++ GF  +  K F  F L+++L NL    +   L+A  R  D A  L  +S+  F+ FAGFIV    +PDYL  WA  IS   W+++ L IN++R     +  V +G+    E  YG  +  Y  G  G   E   W+++ ++  L   V+F  L  L L+Y+ +E
Sbjct:  445 RQLMVTYRNKPFIFGRLLMIFIMGLLFCTVFYSFDPTQVSVVMGVIFATVMFLSMGQSSQIPTYMAEREVFYKQRGANFFRTASYVLATSVSQIPLAVVEKIIFGSLVYWICGFVLEA-KLFIIFELILLLSNLAMGMWFFFLSAIGRNGDIATPLGMVSVLVFVIFAGFIVTKSEIPDYLI-WAHWISPMTWSLKALAINQYRSGPMDVC-VYDGVDYCSE--YGLKMGEYYLGLFGMDTEK-EWIVYGVIYTLAMYVVFMFLSYLSLEYIRYE 713          
BLAST of mRNA_H-elongata_contig14145.2878.1 vs. uniprot
Match: A0A329R8M4_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Phytophthora cactorum TaxID=29920 RepID=A0A329R8M4_9STRA)

HSP 1 Score: 123 bits (308), Expect = 3.390e-28
Identity = 86/279 (30.82%), Postives = 146/279 (52.33%), Query Frame = 0
Query:    1 KQLTATWQNRREILTAVGRHVFVGIFYGTLWWRLGLGKVYERIGVIFFSLVFVMIGNQQNIPRIFFDRLLFYREKGAGVYGAVEYWWSIGLAQLPLAVLNTCIYGSLLYFLAGFHNDTWKPFAYFMLVIILCNLIGLAFCQMLAAATRTQDTAVSLFPISLFFFIAFAGFIVRLPTLPDYLASWAPTISFARWAMEGLVINEFR-GNEEAIFPVPEGIPITPEQIYGAFLEAYGFGKVGDGGEILGWVLWILLGNL------VLFRLLGLLCLKYVTFE 272
            +Q   T++N+  I   +   + +G+ Y T+++     +V   +GVIF +++F+ +G    IP    +R +FY+++GA  +    Y  +   +Q+PLA++ T I+GSL+Y++ GF ++  K F  F  +++L NL    +   L+A  R  D A  L  +S+  F+ FAGFIV    +PDYL  WA  IS   W+++ L IN++R G  +  F   +G+    E  YG  +  Y  G  G   E      WI+ G +      V+F  L  L L+++ +E
Sbjct:  164 RQSMVTYRNKPFIFGRLLMIIIMGLLYSTVFYDFDPKEVSVVMGVIFATVMFLSMGQSSQIPTYMAERDVFYKQRGANFFRTASYVLATSASQIPLAIVETLIFGSLVYWMCGFVSEA-KLFLIFEFILLLSNLAMGMWFFFLSAIGRNGDIATPLGMVSVLVFVIFAGFIVTKSQIPDYLI-WAHWISPMTWSLKALAINQYRSGPMDVCFY--DGVDYCSE--YGLRMGEYYLGLFGMDTE----KEWIVYGIIYTAAMYVVFMFLSYLALEFIRYE 432          
BLAST of mRNA_H-elongata_contig14145.2878.1 vs. uniprot
Match: A0A2P4XIL0_9STRA (ABC Superfamily (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XIL0_9STRA)

HSP 1 Score: 123 bits (309), Expect = 3.940e-28
Identity = 86/278 (30.94%), Postives = 145/278 (52.16%), Query Frame = 0
Query:    1 KQLTATWQNRREILTAVGRHVFVGIFYGTLWWRLGLGKVYERIGVIFFSLVFVMIGNQQNIPRIFFDRLLFYREKGAGVYGAVEYWWSIGLAQLPLAVLNTCIYGSLLYFLAGFHNDTWKPFAYFMLVIILCNLIGLAFCQMLAAATRTQDTAVSLFPISLFFFIAFAGFIVRLPTLPDYLASWAPTISFARWAMEGLVINEFRGNEEAIFPVPEGIPITPEQIYGAFLEAYGFGKVGDGGEILGWVLWILLGNL------VLFRLLGLLCLKYVTFE 272
            +QL  T++N+  I   +     +G+   T+++     +V   +GVIF +++F+ +G    IP    +R +FY+++GA  +    Y  +   +Q+PLAV+ T I+GSL+Y++ GF ++  K F  F L+++L NL    +   L+A  R  D A  L  +S+  F+ FAGFIV    +PDYL  WA  IS   W+++ L IN++R     +  + +G+    E  YG  +  Y  G  G   E      WI+ G +      V+F  L  L L+++ +E
Sbjct:  438 RQLMVTYRNKPFIFGRLLMIFIMGLLICTVFYDFDPTQVSVVMGVIFTTIMFLSMGQSSQIPTYMAERDVFYKQRGANFFRTASYVLATSASQIPLAVVETLIFGSLVYWICGFVSEA-KLFIIFELILLLSNLAMGMWFFFLSAIGRNGDIATPLGMVSVLVFVIFAGFIVTKSQIPDYLI-WAHWISPMTWSLKALAINQYRSGPMDVC-LSDGVDYCTE--YGLTMGEYYLGLFGMDTE----KEWIVYGIIYTAAMYVVFMFLSYLALEFIRYE 706          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig14145.2878.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KKK8_9PHAE3.410e-13472.26ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta... [more]
D8LSM1_ECTSI7.050e-13471.53ABC transporter domain-containing protein n=1 Tax=... [more]
W7TLH8_9STRA5.280e-6242.34Abc transporter g family member 29 n=2 Tax=Monodop... [more]
A0A482RNU1_9ARCH6.260e-5236.16ABC2_membrane domain-containing protein n=1 Tax=ar... [more]
A0A482S1F1_9ARCH4.090e-3837.63ABC2_membrane domain-containing protein n=1 Tax=ar... [more]
A0A482SY90_9ARCH4.510e-3231.60ABC2_membrane domain-containing protein n=1 Tax=ar... [more]
A0A225UUJ8_9STRA2.160e-2830.94ABC transporter (Fragment) n=1 Tax=Phytophthora me... [more]
A0A6A4E8W1_9STRA2.490e-2831.27ABC transporter G family member 34 n=1 Tax=Phytoph... [more]
A0A329R8M4_9STRA3.390e-2830.82Uncharacterized protein (Fragment) n=1 Tax=Phytoph... [more]
A0A2P4XIL0_9STRA3.940e-2830.94ABC Superfamily (Fragment) n=1 Tax=Phytophthora pa... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013525ABC-2 type transporterPFAMPF01061ABC2_membranecoord: 2..203
e-value: 3.1E-30
score: 105.2
NoneNo IPR availablePANTHERPTHR19241ATP-BINDING CASSETTE TRANSPORTERcoord: 10..269
NoneNo IPR availablePANTHERPTHR19241:SF450ABC TRANSPORTER G FAMILY MEMBER 1coord: 10..269
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 34..38
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 57..76
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..33
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..11
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 175..242
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 243..266
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 145..155
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 122..144
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 111..121
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 267..274
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 77..110
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 39..56
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 156..174
NoneNo IPR availableTMHMMTMhelixcoord: 13..35
NoneNo IPR availableTMHMMTMhelixcoord: 86..108
NoneNo IPR availableTMHMMTMhelixcoord: 45..66
NoneNo IPR availableTMHMMTMhelixcoord: 123..145
NoneNo IPR availableTMHMMTMhelixcoord: 243..265
NoneNo IPR availableTMHMMTMhelixcoord: 152..174

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig14145contigH-elongata_contig14145:173..4285 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig14145.2878.1mRNA_H-elongata_contig14145.2878.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig14145 173..4285 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig14145.2878.1 ID=prot_H-elongata_contig14145.2878.1|Name=mRNA_H-elongata_contig14145.2878.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=275bp
KQLTATWQNRREILTAVGRHVFVGIFYGTLWWRLGLGKVYERIGVIFFSL
VFVMIGNQQNIPRIFFDRLLFYREKGAGVYGAVEYWWSIGLAQLPLAVLN
TCIYGSLLYFLAGFHNDTWKPFAYFMLVIILCNLIGLAFCQMLAAATRTQ
DTAVSLFPISLFFFIAFAGFIVRLPTLPDYLASWAPTISFARWAMEGLVI
NEFRGNEEAIFPVPEGIPITPEQIYGAFLEAYGFGKVGDGGEILGWVLWI
LLGNLVLFRLLGLLCLKYVTFERR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013525ABC_2_trans