prot_H-elongata_contig141436.2876.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig141436.2876.1
Unique Nameprot_H-elongata_contig141436.2876.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length95
Homology
BLAST of mRNA_H-elongata_contig141436.2876.1 vs. uniprot
Match: A0A177TP70_9BASI (Uncharacterized protein n=1 Tax=Tilletia indica TaxID=43049 RepID=A0A177TP70_9BASI)

HSP 1 Score: 52.8 bits (125), Expect = 7.210e-6
Identity = 32/89 (35.96%), Postives = 50/89 (56.18%), Query Frame = 0
Query:    8 WVNDSGATEHMTQDPAGLEGYTPAPAGDRVESVGGTLLPVAGYGHLRLLVDQGNGNFTHSTRQLTLKHIAHVPN-LGQHNLLSTKRLTQ 95
            ++ D+G++ H+  DP+ L  Y  A     +E   G L+PVAGYG+LR+    G         ++ LK +AH P+ +G  NL+  KRLT+
Sbjct:  751 FILDTGSSRHIVADPSSLTDYRNAAPETGIECANGGLMPVAGYGNLRVTTQAG--------LKIELKDVAHCPSAIG--NLIGGKRLTK 829          
BLAST of mRNA_H-elongata_contig141436.2876.1 vs. uniprot
Match: A0A2P6P2V5_ROSCH (Uncharacterized protein n=1 Tax=Rosa chinensis TaxID=74649 RepID=A0A2P6P2V5_ROSCH)

HSP 1 Score: 50.4 bits (119), Expect = 1.040e-5
Identity = 31/90 (34.44%), Postives = 47/90 (52.22%), Query Frame = 0
Query:    6 EFWVNDSGATEHMTQDPAGLEGYTPAPAGDRVESVGGTLLPVAGYGHLRLLVDQGNGNFTHSTRQLTLKHIAHVPNLGQHNLLSTKRLTQ 95
            + W+ DSGAT+HMT +P+ +   TP      V +  G   P+ G G + L            T+ +TL  +  VP+L  HNLLS K++T+
Sbjct:   21 DMWIIDSGATDHMTNNPSNIHHLTPVRRSG-VTNANGDSYPITGAGSVTL------------TKSITLDTVLLVPSLS-HNLLSVKQITK 96          
BLAST of mRNA_H-elongata_contig141436.2876.1 vs. uniprot
Match: A0A2P6S473_ROSCH (Putative RNA-directed DNA polymerase n=1 Tax=Rosa chinensis TaxID=74649 RepID=A0A2P6S473_ROSCH)

HSP 1 Score: 50.4 bits (119), Expect = 4.640e-5
Identity = 31/90 (34.44%), Postives = 47/90 (52.22%), Query Frame = 0
Query:    6 EFWVNDSGATEHMTQDPAGLEGYTPAPAGDRVESVGGTLLPVAGYGHLRLLVDQGNGNFTHSTRQLTLKHIAHVPNLGQHNLLSTKRLTQ 95
            + W+ DSGAT+HMT +P+ +   TP      V +  G   P+ G G + L            T+ +TL  +  VP+L  HNLLS K++T+
Sbjct:  236 DMWIIDSGATDHMTNNPSNIHHLTPVRRSG-VTNANGDSYPITGAGSVTL------------TKSITLDTVLLVPSLS-HNLLSVKQITK 311          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig141436.2876.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A177TP70_9BASI7.210e-635.96Uncharacterized protein n=1 Tax=Tilletia indica Ta... [more]
A0A2P6P2V5_ROSCH1.040e-534.44Uncharacterized protein n=1 Tax=Rosa chinensis Tax... [more]
A0A2P6S473_ROSCH4.640e-534.44Putative RNA-directed DNA polymerase n=1 Tax=Rosa ... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig141436contigH-elongata_contig141436:974..1258 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig141436.2876.1mRNA_H-elongata_contig141436.2876.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig141436 974..1258 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig141436.2876.1 ID=prot_H-elongata_contig141436.2876.1|Name=mRNA_H-elongata_contig141436.2876.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=95bp
ERRESEFWVNDSGATEHMTQDPAGLEGYTPAPAGDRVESVGGTLLPVAGY
GHLRLLVDQGNGNFTHSTRQLTLKHIAHVPNLGQHNLLSTKRLTQ
back to top