mRNA_H-elongata_contig14135.2870.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig14135.2870.1
Unique NamemRNA_H-elongata_contig14135.2870.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig14135.2870.1 vs. uniprot
Match: Q2TUJ1_FUCVE (NADH dehydrogenase subunit 2 n=3 Tax=Fucus TaxID=3011 RepID=Q2TUJ1_FUCVE)

HSP 1 Score: 473 bits (1217), Expect = 6.180e-164
Identity = 234/279 (83.87%), Postives = 260/279 (93.19%), Query Frame = 1
Query:    1 LGLVCMISALLFKLGAAPYHMWIADVYEGSPTIVGLIFAVVPKIAIFTVVLRLSFTGFWSLFPGFWEDFFCLCGMLSLFIGCLCGLGETKIKRLLAFSSVGHVGFLCLGLASGSVEGIQSVLFYLFVYMLTATFLWVYVLHLDVGIKSSNSFLTFADSIGLIRSNPVFGLGIILMIFSLAGVPPLGGFFAKFNIFVSLIDASFYGVAIFIVLSSVISAFYYIRLIKIFYFEKNDNWFYFAPISQGASFTLVITALTIVFFMFSPNLFYLLSYKISLGLM 837
            LGL+C ISALLFKLGAAPYHMWIADVYEGSPTIV LIFAVVPKIA+F V+LRLSF  FWS FP FWEDFFCLCG+LSLFIGCLCGLGETKIKRLLAFSSVGHVGFLC+GLASGS+EG+Q VLFYLF+YMLTA FLW+YVLHL++G+ ++ SFLTFADSIGL+RSNPVFGLG++LMIFSLAGVPPLGGFFAK NIF+SL+DASFY VAIF VL+SVISAFYYIRLIKIFYFEKNDNWFYFAPIS+GAS  LV+TA+ ++FFM SPNLFYLL+YKI LGLM
Sbjct:  217 LGLICTISALLFKLGAAPYHMWIADVYEGSPTIVSLIFAVVPKIAVFIVILRLSFLSFWSFFPVFWEDFFCLCGLLSLFIGCLCGLGETKIKRLLAFSSVGHVGFLCIGLASGSIEGVQGVLFYLFMYMLTAAFLWIYVLHLELGLTTTTSFLTFADSIGLVRSNPVFGLGVVLMIFSLAGVPPLGGFFAKLNIFISLVDASFYLVAIFAVLTSVISAFYYIRLIKIFYFEKNDNWFYFAPISKGASLVLVLTAIIVIFFMLSPNLFYLLTYKIGLGLM 495          
BLAST of mRNA_H-elongata_contig14135.2870.1 vs. uniprot
Match: E6ZES5_ECTSI (NADH dehydrogenase subunit 2 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=E6ZES5_ECTSI)

HSP 1 Score: 441 bits (1134), Expect = 2.270e-151
Identity = 217/279 (77.78%), Postives = 253/279 (90.68%), Query Frame = 1
Query:    4 GLVCMISALLFKLGAAPYHMWIADVYEGSPTIVGLIFAVVPKIAIFTVVLRLSFTGFWSLFPGFWEDFFCLCGMLSLFIGCLCGLGETKIKRLLAFSSVGHVGFLCLGLASGSVEGIQSVLFYLFVYMLTATFLWVYVLHLDVGIKSSNSFLTFADSIGLIRSNPVFGLGIILMIFSLAGVPPLGGFFAKFNIFVSLIDASFYGVAIFIVLSSVISAFYYIRLIKIFYFEKNDNWFYFAPISQGASFTLVITALTIVFFMFSPNLFYLLSYKISLGLMF 840
            GLVC++SALLFKLGAAPYHMWIADVYEG+PT+V LIFA+VPK+A F VVLR++FT FWSLFP  WEDFFC+CG+LSLFIGCLCGLGETKIKR+LAFSSVGHVGFLCLGLASGS+EGIQ+VLFYL  YMLTA+FLWVYVLHLD+   S++S LTFAD+IGLIRSNP  G G++LMIFSLAG+PP GGFFAK NIF+ LID+SF+ VA+F VL+SVISAFYYIRLIKIFYFEKN+NWF+FAP+++GAS  LV++ L I+FF+FSPNLFYLLSYK+ LGL F
Sbjct:  218 GLVCLVSALLFKLGAAPYHMWIADVYEGAPTLVSLIFALVPKVAFFVVVLRIAFTSFWSLFPTLWEDFFCICGLLSLFIGCLCGLGETKIKRILAFSSVGHVGFLCLGLASGSIEGIQAVLFYLVFYMLTASFLWVYVLHLDL--TSNSSLLTFADAIGLIRSNPFLGFGVVLMIFSLAGIPPFGGFFAKLNIFIGLIDSSFFIVAVFAVLTSVISAFYYIRLIKIFYFEKNNNWFFFAPLTKGASIVLVLSGLIIIFFLFSPNLFYLLSYKVGLGLFF 494          
BLAST of mRNA_H-elongata_contig14135.2870.1 vs. uniprot
Match: F8UWM7_9PHAE (NADH dehydrogenase subunit 2 n=61 Tax=Laminariales TaxID=2886 RepID=F8UWM7_9PHAE)

HSP 1 Score: 439 bits (1128), Expect = 1.970e-150
Identity = 209/280 (74.64%), Postives = 250/280 (89.29%), Query Frame = 1
Query:    1 LGLVCMISALLFKLGAAPYHMWIADVYEGSPTIVGLIFAVVPKIAIFTVVLRLSFTGFWSLFPGFWEDFFCLCGMLSLFIGCLCGLGETKIKRLLAFSSVGHVGFLCLGLASGSVEGIQSVLFYLFVYMLTATFLWVYVLHLDVGIKSSNSFLTFADSIGLIRSNPVFGLGIILMIFSLAGVPPLGGFFAKFNIFVSLIDASFYGVAIFIVLSSVISAFYYIRLIKIFYFEKNDNWFYFAPISQGASFTLVITALTIVFFMFSPNLFYLLSYKISLGLMF 840
            LGL+C++SALLFK+GAAPYHMWIADVYEG+PT+VG IFAV+PK A F V+LRLSFT FWS FP  WE+FFC+CG+LSLFIGC+CGLGETKIKRLLAFSSVGHVGFLCLGLASG++EGIQ+VLFYL +YMLTA FLWVY++HLD+   S ++ LTF+DSIGL+RSNP+ G G+ LMIFSLAG+PP GGFFAK NIFVSL+D+S Y V+IF+V++SVISAFYYIRLIKIFYFEKN NWF+F P+S+GAS  LV++  TI+FFM SPN+FYLL+YK+ LGLMF
Sbjct:  217 LGLICVVSALLFKIGAAPYHMWIADVYEGAPTLVGFIFAVIPKFAFFVVILRLSFTSFWSFFPSLWENFFCICGLLSLFIGCICGLGETKIKRLLAFSSVGHVGFLCLGLASGNIEGIQAVLFYLSIYMLTAAFLWVYIVHLDLSSTSGSTLLTFSDSIGLVRSNPLMGFGVALMIFSLAGIPPFGGFFAKLNIFVSLVDSSLYIVSIFVVITSVISAFYYIRLIKIFYFEKNKNWFFFTPLSKGASMVLVLSGFTIIFFMLSPNIFYLLTYKVGLGLMF 496          
BLAST of mRNA_H-elongata_contig14135.2870.1 vs. uniprot
Match: Q2TUE9_9PHAE (NADH dehydrogenase subunit 2 n=2 Tax=Desmarestia TaxID=31339 RepID=Q2TUE9_9PHAE)

HSP 1 Score: 438 bits (1127), Expect = 2.800e-150
Identity = 214/279 (76.70%), Postives = 250/279 (89.61%), Query Frame = 1
Query:    1 LGLVCMISALLFKLGAAPYHMWIADVYEGSPTIVGLIFAVVPKIAIFTVVLRLSFTGFWSLFPGFWEDFFCLCGMLSLFIGCLCGLGETKIKRLLAFSSVGHVGFLCLGLASGSVEGIQSVLFYLFVYMLTATFLWVYVLHLDVGIKSSNSFLTFADSIGLIRSNPVFGLGIILMIFSLAGVPPLGGFFAKFNIFVSLIDASFYGVAIFIVLSSVISAFYYIRLIKIFYFEKNDNWFYFAPISQGASFTLVITALTIVFFMFSPNLFYLLSYKISLGLM 837
            LGL+C++SALLFKLGAAPYHMWIADVYEGSPT+V  IFAVVPK +IF V+ RL FT FWS FP  WEDFFC+CG+LSL IGCLCGLGETKIKRLLAFSSVGHVGFLCLGLASGS+EG+Q+VLFYL +YMLTA FLW+YVLHLD+   S+ S +TFAD+IGL RSNP+ GL ++LMIFSLAG+PPLGGFFAK NIF+SL+DASFY +A+F VL+SVISAFYYIRLIKIFYFEKN+NWF+FAP+S+G++  LV+TALTI FF+ SPNLFYLL+YKI LGL+
Sbjct:  217 LGLICVVSALLFKLGAAPYHMWIADVYEGSPTLVSFIFAVVPKFSIFVVISRLIFTSFWSFFPSLWEDFFCICGLLSLSIGCLCGLGETKIKRLLAFSSVGHVGFLCLGLASGSIEGLQAVLFYLLIYMLTAAFLWIYVLHLDIDSTSNKSLVTFADAIGLARSNPLLGLVVVLMIFSLAGIPPLGGFFAKLNIFISLVDASFYLIAVFTVLTSVISAFYYIRLIKIFYFEKNENWFFFAPLSKGSAIVLVLTALTICFFICSPNLFYLLTYKIGLGLL 495          
BLAST of mRNA_H-elongata_contig14135.2870.1 vs. uniprot
Match: A0A3G5FPS0_9PHAE (NADH dehydrogenase subunit 2 n=1 Tax=Cladosiphon okamuranus TaxID=309737 RepID=A0A3G5FPS0_9PHAE)

HSP 1 Score: 434 bits (1117), Expect = 8.610e-149
Identity = 212/279 (75.99%), Postives = 251/279 (89.96%), Query Frame = 1
Query:    4 GLVCMISALLFKLGAAPYHMWIADVYEGSPTIVGLIFAVVPKIAIFTVVLRLSFTGFWSLFPGFWEDFFCLCGMLSLFIGCLCGLGETKIKRLLAFSSVGHVGFLCLGLASGSVEGIQSVLFYLFVYMLTATFLWVYVLHLDVGIKSSNSFLTFADSIGLIRSNPVFGLGIILMIFSLAGVPPLGGFFAKFNIFVSLIDASFYGVAIFIVLSSVISAFYYIRLIKIFYFEKNDNWFYFAPISQGASFTLVITALTIVFFMFSPNLFYLLSYKISLGLMF 840
            GL+ M+SALLFKLGAAPYHMWIADVYEG+PT V LIFAVVPK+A F VVLRL+FT FWSLFP FWEDFFCLCG+LSLFIGC+CGLGETKIKRLLAFSS+GHVGFLCLGLASGS+EG+Q+VLFYL +YMLTA+FLWVYVLHLD+   S++S LTFAD+IGL+RSNP  G G++LMIFSLAG+PP GGFFAK NIF+ L+D+SFY +A+F V++SVISAFYYIRLIKIFYFEKN NWF+FAP+++GAS  LV++ L+I+FF+ SPN FYL+SYK+ L LMF
Sbjct:  218 GLIFMVSALLFKLGAAPYHMWIADVYEGAPTFVSLIFAVVPKVAFFVVVLRLAFTSFWSLFPMFWEDFFCLCGLLSLFIGCICGLGETKIKRLLAFSSIGHVGFLCLGLASGSLEGLQAVLFYLVIYMLTASFLWVYVLHLDL--TSTSSLLTFADAIGLVRSNPFLGFGVVLMIFSLAGIPPFGGFFAKLNIFIGLVDSSFYILAVFAVITSVISAFYYIRLIKIFYFEKNQNWFFFAPLTKGASIVLVLSGLSIIFFILSPNFFYLVSYKVGLSLMF 494          
BLAST of mRNA_H-elongata_contig14135.2870.1 vs. uniprot
Match: A0A516ICJ6_9PHAE (NADH dehydrogenase subunit 2 n=3 Tax=Lessonia TaxID=105411 RepID=A0A516ICJ6_9PHAE)

HSP 1 Score: 430 bits (1105), Expect = 6.070e-147
Identity = 205/280 (73.21%), Postives = 249/280 (88.93%), Query Frame = 1
Query:    1 LGLVCMISALLFKLGAAPYHMWIADVYEGSPTIVGLIFAVVPKIAIFTVVLRLSFTGFWSLFPGFWEDFFCLCGMLSLFIGCLCGLGETKIKRLLAFSSVGHVGFLCLGLASGSVEGIQSVLFYLFVYMLTATFLWVYVLHLDVGIKSSNSFLTFADSIGLIRSNPVFGLGIILMIFSLAGVPPLGGFFAKFNIFVSLIDASFYGVAIFIVLSSVISAFYYIRLIKIFYFEKNDNWFYFAPISQGASFTLVITALTIVFFMFSPNLFYLLSYKISLGLMF 840
            LGL+C++SALLFK+GA+PYHMWIADVYEG+PT+V  IFAV+PK A F ++LRLSF  FWS FP FWE+FFC+CG+ SLFIGC+CGLGETKIKRLLAFSSVGHVGFLCLGLASG++EGIQSVLFYL VYM T  FLWVY+L LD+   S ++ LTF+DSIGLIRSNP+ G G+ LM+FSLAG+PP GGFFAK NIF+SL+++SFY V+IF+V++SVISAFYYIRLIKIFYFEKN NWF+FAP+S+GA+  LV+++LTI+FF+ SPN+FYLL+YKISL LMF
Sbjct:  217 LGLICVVSALLFKIGASPYHMWIADVYEGAPTLVSFIFAVIPKFAFFVIILRLSFISFWSFFPSFWENFFCICGIFSLFIGCVCGLGETKIKRLLAFSSVGHVGFLCLGLASGNIEGIQSVLFYLSVYMFTVAFLWVYILQLDLSSTSGSTLLTFSDSIGLIRSNPLMGFGVALMVFSLAGIPPFGGFFAKLNIFISLVESSFYIVSIFVVITSVISAFYYIRLIKIFYFEKNKNWFFFAPVSKGAAVVLVLSSLTIIFFILSPNIFYLLTYKISLSLMF 496          
BLAST of mRNA_H-elongata_contig14135.2870.1 vs. uniprot
Match: A0A8F0K0C6_9PHAE (NADH dehydrogenase subunit 2 n=2 Tax=Ecklonia TaxID=105406 RepID=A0A8F0K0C6_9PHAE)

HSP 1 Score: 419 bits (1077), Expect = 1.060e-142
Identity = 201/280 (71.79%), Postives = 243/280 (86.79%), Query Frame = 1
Query:    1 LGLVCMISALLFKLGAAPYHMWIADVYEGSPTIVGLIFAVVPKIAIFTVVLRLSFTGFWSLFPGFWEDFFCLCGMLSLFIGCLCGLGETKIKRLLAFSSVGHVGFLCLGLASGSVEGIQSVLFYLFVYMLTATFLWVYVLHLDVGIKSSNSFLTFADSIGLIRSNPVFGLGIILMIFSLAGVPPLGGFFAKFNIFVSLIDASFYGVAIFIVLSSVISAFYYIRLIKIFYFEKNDNWFYFAPISQGASFTLVITALTIVFFMFSPNLFYLLSYKISLGLMF 840
            LGLVCM+SALLFK+GAAPYHMWIADVYEG+PT+VG IFAV+PK + F ++LRLSF  FWS FP  WE+FFC CG+LSLFIGC+CGLGETKIKRLLAFSSVGHVGFLCLGLASG++EG+Q+VLFYL +YM T  FLWVY+L+LD+   S ++ LTF+DSIGLIRSNP+ G G+ LMIFSLAG+PP GGFFAK NIFVSL+++SFY V++F+V+SSVISAFYYIRLIKIFYFE     F+FAP+ +GA+  LV++ LTI+FFMFSPN+FYLL+YK+ L  MF
Sbjct:  217 LGLVCMVSALLFKIGAAPYHMWIADVYEGAPTLVGFIFAVIPKFSFFVIILRLSFISFWSFFPSLWENFFCSCGLLSLFIGCICGLGETKIKRLLAFSSVGHVGFLCLGLASGNIEGLQAVLFYLLIYMFTVAFLWVYLLYLDLSSTSGSALLTFSDSIGLIRSNPLIGFGVTLMIFSLAGIPPFGGFFAKLNIFVSLVESSFYIVSVFVVISSVISAFYYIRLIKIFYFENXXXXFFFAPLDKGAAMVLVLSGLTIIFFMFSPNIFYLLTYKVGLSFMF 496          
BLAST of mRNA_H-elongata_contig14135.2870.1 vs. uniprot
Match: A0A8F0FCX9_9PHAE (NADH dehydrogenase subunit 2 n=3 Tax=Laminariales TaxID=2886 RepID=A0A8F0FCX9_9PHAE)

HSP 1 Score: 416 bits (1070), Expect = 1.220e-141
Identity = 199/279 (71.33%), Postives = 239/279 (85.66%), Query Frame = 1
Query:    4 GLVCMISALLFKLGAAPYHMWIADVYEGSPTIVGLIFAVVPKIAIFTVVLRLSFTGFWSLFPGFWEDFFCLCGMLSLFIGCLCGLGETKIKRLLAFSSVGHVGFLCLGLASGSVEGIQSVLFYLFVYMLTATFLWVYVLHLDVGIKSSNSFLTFADSIGLIRSNPVFGLGIILMIFSLAGVPPLGGFFAKFNIFVSLIDASFYGVAIFIVLSSVISAFYYIRLIKIFYFEKNDNWFYFAPISQGASFTLVITALTIVFFMFSPNLFYLLSYKISLGLMF 840
            GL+C++SAL+FK+GAAPYHMWIADVYEG+P +V  +FAVVPK A F V+LR+ FT FWS FP  WEDFFC+CG+LSL IGCLCGLGETKIKRLLAFSS+GHVGFLCLGLASGS+EG+Q+VLFYL +YMLTA FLWVYV+HLD+    S + LTFAD IGL RSNP+  LG++LMIFSLAG+PP GGFFAK NIFV L+D+SFY +A+F V +SVISAFYY+RLIKIFYFEKN+NWF+F  +S+GA   LV++ L+I+FFM SPNLFYL++YK  L LMF
Sbjct:  218 GLICLVSALVFKIGAAPYHMWIADVYEGAPALVSFLFAVVPKFAFFVVILRIVFTSFWSFFPTLWEDFFCICGLLSLLIGCLCGLGETKIKRLLAFSSIGHVGFLCLGLASGSIEGVQAVLFYLLIYMLTAAFLWVYVVHLDLASTPSGTLLTFADGIGLARSNPLLALGVVLMIFSLAGIPPFGGFFAKLNIFVGLVDSSFYILALFTVFTSVISAFYYLRLIKIFYFEKNNNWFFFPSLSKGAGMVLVLSCLSILFFMLSPNLFYLITYKAGLALMF 496          
BLAST of mRNA_H-elongata_contig14135.2870.1 vs. uniprot
Match: A0A8F0K0T6_9PHAE (NADH dehydrogenase subunit 2 n=1 Tax=Analipus japonicus TaxID=31333 RepID=A0A8F0K0T6_9PHAE)

HSP 1 Score: 415 bits (1066), Expect = 5.110e-141
Identity = 201/279 (72.04%), Postives = 246/279 (88.17%), Query Frame = 1
Query:    4 GLVCMISALLFKLGAAPYHMWIADVYEGSPTIVGLIFAVVPKIAIFTVVLRLSFTGFWSLFPGFWEDFFCLCGMLSLFIGCLCGLGETKIKRLLAFSSVGHVGFLCLGLASGSVEGIQSVLFYLFVYMLTATFLWVYVLHLDV-GIKSSNSFLTFADSIGLIRSNPVFGLGIILMIFSLAGVPPLGGFFAKFNIFVSLIDASFYGVAIFIVLSSVISAFYYIRLIKIFYFEKNDNWFYFAPISQGASFTLVITALTIVFFMFSPNLFYLLSYKISLGLM 837
            GL+CMISALLFKLGAAPYHMWIADVYEG+PTIV  IFAVVPK A+F V+LRLSFT FWS FP FWEDFFC+CG+LSLFIGC CGLGETKIKRLLAFSSVGHVGFLCLGL+ G++EG+Q VLFYL +YMLT++FLW YV++L++   + ++SF +F D+IGL++SNP+ G G++L++FSLAG+PPLGGFFAK NIFV L+DASFY V +F VL+SVISAFYYIRLIKIFYFEKN +WF+FAP+S+GAS  LV+T+  ++FFM +PN +YLL++KI LGLM
Sbjct:  218 GLICMISALLFKLGAAPYHMWIADVYEGAPTIVSFIFAVVPKFAVFVVILRLSFTSFWSFFPIFWEDFFCVCGLLSLFIGCFCGLGETKIKRLLAFSSVGHVGFLCLGLSCGNLEGVQGVLFYLLIYMLTSSFLWGYVVYLNLDATRHNSSFTSFTDAIGLVKSNPLLGFGVVLILFSLAGIPPLGGFFAKLNIFVGLVDASFYIVGVFAVLTSVISAFYYIRLIKIFYFEKNKDWFFFAPLSKGASTLLVLTSFALIFFMCTPNFYYLLTHKIGLGLM 496          
BLAST of mRNA_H-elongata_contig14135.2870.1 vs. uniprot
Match: A0A089N305_PETFA (NADH dehydrogenase subunit 2 n=6 Tax=Ectocarpales TaxID=2877 RepID=A0A089N305_PETFA)

HSP 1 Score: 413 bits (1061), Expect = 2.650e-140
Identity = 208/279 (74.55%), Postives = 236/279 (84.59%), Query Frame = 1
Query:    4 GLVCMISALLFKLGAAPYHMWIADVYEGSPTIVGLIFAVVPKIAIFTVVLRLSFTGFWSLFPGFWEDFFCLCGMLSLFIGCLCGLGETKIKRLLAFSSVGHVGFLCLGLASGSVEGIQSVLFYLFVYMLTATFLWVYVLHLDVGIKSSNSFLTFADSIGLIRSNPVFGLGIILMIFSLAGVPPLGGFFAKFNIFVSLIDASFYGVAIFIVLSSVISAFYYIRLIKIFYFEKNDNWFYFAPISQGASFTLVITALTIVFFMFSPNLFYLLSYKISLGLMF 840
            GL+C++SALLFKLGAAPYHMWIADVYEG+PT+V LIFAVVPK+A F VVLRLSFT FWSLFP FWEDFFC+CG++SLFIGCLCGLGETKIKRLLAFSSVGHVGFLCLGLASGS+EG+Q+VLFYL +YMLTA FLW+YVLHLD+   S +S LTFAD+IGL+RSNP  G G++LMIFSLAG+PP GGFFAKFNIF+ L+D+SFY VAIF V +SVISAFYYIRLIKIFYFEKN                  +  L I FFM SPNLFYLL+YK+SLGLMF
Sbjct:  218 GLICLVSALLFKLGAAPYHMWIADVYEGAPTLVSLIFAVVPKVAFFAVVLRLSFTSFWSLFPVFWEDFFCVCGLISLFIGCLCGLGETKIKRLLAFSSVGHVGFLCLGLASGSIEGVQAVLFYLVIYMLTAAFLWIYVLHLDI--TSDSSLLTFADAIGLVRSNPFLGFGVVLMIFSLAGIPPFGGFFAKFNIFIGLVDSSFYIVAIFAVFTSVISAFYYIRLIKIFYFEKNXXXXXXXXXXXXXXXXXXLCGLIIFFFMLSPNLFYLLAYKVSLGLMF 494          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig14135.2870.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Q2TUJ1_FUCVE6.180e-16483.87NADH dehydrogenase subunit 2 n=3 Tax=Fucus TaxID=3... [more]
E6ZES5_ECTSI2.270e-15177.78NADH dehydrogenase subunit 2 n=1 Tax=Ectocarpus si... [more]
F8UWM7_9PHAE1.970e-15074.64NADH dehydrogenase subunit 2 n=61 Tax=Laminariales... [more]
Q2TUE9_9PHAE2.800e-15076.70NADH dehydrogenase subunit 2 n=2 Tax=Desmarestia T... [more]
A0A3G5FPS0_9PHAE8.610e-14975.99NADH dehydrogenase subunit 2 n=1 Tax=Cladosiphon o... [more]
A0A516ICJ6_9PHAE6.070e-14773.21NADH dehydrogenase subunit 2 n=3 Tax=Lessonia TaxI... [more]
A0A8F0K0C6_9PHAE1.060e-14271.79NADH dehydrogenase subunit 2 n=2 Tax=Ecklonia TaxI... [more]
A0A8F0FCX9_9PHAE1.220e-14171.33NADH dehydrogenase subunit 2 n=3 Tax=Laminariales ... [more]
A0A8F0K0T6_9PHAE5.110e-14172.04NADH dehydrogenase subunit 2 n=1 Tax=Analipus japo... [more]
A0A089N305_PETFA2.650e-14074.55NADH dehydrogenase subunit 2 n=6 Tax=Ectocarpales ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig14135contigH-elongata_contig14135:2..844 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score181.8
Seed ortholog evalue4.4e-43
Seed eggNOG ortholog466038.KI421440_gene776
Preferred namenuoN
KEGG rclassRC00061
KEGG koko:K00343
KEGG TC3.D.1
KEGG ReactionR11945
KEGG Pathwayko00190,ko01100,map00190,map01100
KEGG ModuleM00144
GOsGO:0003674,GO:0003824,GO:0003954,GO:0006091,GO:0006119,GO:0006120,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008137,GO:0008150,GO:0008152,GO:0009117,GO:0009123,GO:0009126,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009167,GO:0009199,GO:0009205,GO:0009259,GO:0009987,GO:0015980,GO:0016310,GO:0016491,GO:0016651,GO:0016655,GO:0017144,GO:0019637,GO:0019693,GO:0022900,GO:0022904,GO:0034641,GO:0042773,GO:0042775,GO:0044237,GO:0044238,GO:0044281,GO:0045333,GO:0046034,GO:0046483,GO:0050136,GO:0055086,GO:0055114,GO:0071704,GO:0072521,GO:1901135,GO:1901360,GO:1901564
EggNOG free text desc.NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
EggNOG OGs1MV56@1224,2TQMX@28211,4BPBD@82117,COG1007@1,COG1007@2
EC1.6.5.3
COG Functional cat.C
Best tax levelunclassified Alphaproteobacteria
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Hectar predicted targeting categoryother localisation
Exons1
Model size843
Cds size828
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929840.7156718-UTR-H-elongata_contig14135:1..161622929840.7156718-UTR-H-elongata_contig14135:1..16Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig14135 2..16 +
1691679179.027026-UTR-H-elongata_contig14135:1..161691679179.027026-UTR-H-elongata_contig14135:1..16Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig14135 2..16 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929840.73032-CDS-H-elongata_contig14135:16..8441622929840.73032-CDS-H-elongata_contig14135:16..844Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig14135 17..844 +
1691679179.0405524-CDS-H-elongata_contig14135:16..8441691679179.0405524-CDS-H-elongata_contig14135:16..844Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig14135 17..844 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig14135.2870.1prot_H-elongata_contig14135.2870.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig14135 17..844 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig14135.2870.1

>prot_H-elongata_contig14135.2870.1 ID=prot_H-elongata_contig14135.2870.1|Name=mRNA_H-elongata_contig14135.2870.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=276bp
MISALLFKLGAAPYHMWIADVYEGSPTIVGLIFAVVPKIAIFTVVLRLSF
TGFWSLFPGFWEDFFCLCGMLSLFIGCLCGLGETKIKRLLAFSSVGHVGF
LCLGLASGSVEGIQSVLFYLFVYMLTATFLWVYVLHLDVGIKSSNSFLTF
ADSIGLIRSNPVFGLGIILMIFSLAGVPPLGGFFAKFNIFVSLIDASFYG
VAIFIVLSSVISAFYYIRLIKIFYFEKNDNWFYFAPISQGASFTLVITAL
TIVFFMFSPNLFYLLSYKISLGLMF*
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mRNA from alignment at H-elongata_contig14135:2..844+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig14135.2870.1 ID=mRNA_H-elongata_contig14135.2870.1|Name=mRNA_H-elongata_contig14135.2870.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=843bp|location=Sequence derived from alignment at H-elongata_contig14135:2..844+ (Himanthalia elongata Himel1 dioecious)
TTAGGGCTTGTTTGTATGATTTCGGCATTATTATTTAAATTAGGGGCTGC ACCCTACCATATGTGGATAGCGGATGTTTACGAGGGATCTCCGACTATAG TTGGCCTTATTTTTGCAGTTGTTCCTAAAATTGCTATATTTACTGTTGTG TTGCGTTTATCTTTTACTGGGTTTTGGTCTCTTTTCCCAGGATTCTGGGA AGATTTCTTCTGTTTATGCGGTATGCTAAGTCTTTTTATTGGCTGTCTTT GTGGTTTAGGGGAAACCAAAATTAAAAGGCTTCTTGCGTTTAGTAGTGTT GGTCATGTTGGGTTTTTATGTTTAGGTTTAGCTAGTGGTAGCGTAGAAGG TATTCAAAGTGTATTATTTTACCTTTTTGTATACATGTTAACAGCTACAT TTTTATGGGTTTATGTTTTGCATCTAGATGTTGGTATAAAATCTAGTAAT AGTTTCTTAACTTTTGCGGATTCTATAGGGTTAATTCGCTCAAATCCAGT TTTTGGGTTGGGAATTATTTTAATGATTTTTTCTCTTGCGGGAGTGCCTC CATTAGGTGGATTTTTTGCGAAGTTTAATATATTTGTAAGTTTAATAGAT GCCTCATTTTATGGCGTAGCTATATTTATTGTTTTGAGTAGTGTGATATC AGCTTTTTATTATATACGTTTAATAAAAATTTTTTACTTTGAAAAAAATG ATAATTGGTTCTATTTTGCACCTATATCCCAGGGTGCATCTTTTACGTTA GTAATAACCGCACTAACAATTGTATTTTTTATGTTTAGTCCTAATTTATT TTATTTATTAAGCTATAAAATAAGTTTAGGGTTAATGTTTTAA
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Coding sequence (CDS) from alignment at H-elongata_contig14135:2..844+

>mRNA_H-elongata_contig14135.2870.1 ID=mRNA_H-elongata_contig14135.2870.1|Name=mRNA_H-elongata_contig14135.2870.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1656bp|location=Sequence derived from alignment at H-elongata_contig14135:2..844+ (Himanthalia elongata Himel1 dioecious)
ATGATTTCGGCATTATTATTTAAATTAGGGGCTGCACCCTACCATATGTG
GATAGCGGATGTTTACGAGGGATCTCCGACTATAGTTGGCCTTATTTTTG
CAGTTGTTCCTAAAATTGCTATATTTACTGTTGTGTTGCGTTTATCTTTT
ACTGGGTTTTGGTCTCTTTTCCCAGGATTCTGGGAAGATTTCTTCTGTTT
ATGCGGTATGCTAAGTCTTTTTATTGGCTGTCTTTGTGGTTTAGGGGAAA
CCAAAATTAAAAGGCTTCTTGCGTTTAGTAGTGTTGGTCATGTTGGGTTT
TTATGTTTAGGTTTAGCTAGTGGTAGCGTAGAAGGTATTCAAAGTGTATT
ATTTTACCTTTTTGTATACATGTTAACAGCTACATTTTTATGGGTTTATG
TTTTGCATCTAGATGTTGGTATAAAATCTAGTAATAGTTTCTTAACTTTT
GCGGATTCTATAGGGTTAATTCGCTCAAATCCAGTTTTTGGGTTGGGAAT
TATTTTAATGATTTTTTCTCTTGCGGGAGTGCCTCCATTAGGTGGATTTT
TTGCGAAGTTTAATATATTTGTAAGTTTAATAGATGCCTCATTTTATGGC
GTAGCTATATTTATTGTTTTGAGTAGTGTGATATCAGCTTTTTATTATAT
ACGTTTAATAAAAATTTTTTACTTTGAAAAAAATGATAATTGGTTCTATT
TTGCACCTATATCCCAGGGTGCATCTTTTACGTTAGTAATAACCGCACTA
ACAATTGTATTTTTTATGTTTAGTCCTAATTTATTTTATTTATTAAGCTA
TAAAATAAGTTTAGGGTTAATGTTTTAAATGATTTCGGCATTATTATTTA
AATTAGGGGCTGCACCCTACCATATGTGGATAGCGGATGTTTACGAGGGA
TCTCCGACTATAGTTGGCCTTATTTTTGCAGTTGTTCCTAAAATTGCTAT
ATTTACTGTTGTGTTGCGTTTATCTTTTACTGGGTTTTGGTCTCTTTTCC
CAGGATTCTGGGAAGATTTCTTCTGTTTATGCGGTATGCTAAGTCTTTTT
ATTGGCTGTCTTTGTGGTTTAGGGGAAACCAAAATTAAAAGGCTTCTTGC
GTTTAGTAGTGTTGGTCATGTTGGGTTTTTATGTTTAGGTTTAGCTAGTG
GTAGCGTAGAAGGTATTCAAAGTGTATTATTTTACCTTTTTGTATACATG
TTAACAGCTACATTTTTATGGGTTTATGTTTTGCATCTAGATGTTGGTAT
AAAATCTAGTAATAGTTTCTTAACTTTTGCGGATTCTATAGGGTTAATTC
GCTCAAATCCAGTTTTTGGGTTGGGAATTATTTTAATGATTTTTTCTCTT
GCGGGAGTGCCTCCATTAGGTGGATTTTTTGCGAAGTTTAATATATTTGT
AAGTTTAATAGATGCCTCATTTTATGGCGTAGCTATATTTATTGTTTTGA
GTAGTGTGATATCAGCTTTTTATTATATACGTTTAATAAAAATTTTTTAC
TTTGAAAAAAATGATAATTGGTTCTATTTTGCACCTATATCCCAGGGTGC
ATCTTTTACGTTAGTAATAACCGCACTAACAATTGTATTTTTTATGTTTA
GTCCTAATTTATTTTATTTATTAAGCTATAAAATAAGTTTAGGGTTAATG
TTTTAA
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