prot_H-elongata_contig141321.2865.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig141321.2865.1
Unique Nameprot_H-elongata_contig141321.2865.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length83
Homology
BLAST of mRNA_H-elongata_contig141321.2865.1 vs. uniprot
Match: A0A6H5JWI1_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWI1_9PHAE)

HSP 1 Score: 153 bits (387), Expect = 2.530e-44
Identity = 71/83 (85.54%), Postives = 76/83 (91.57%), Query Frame = 0
Query:    1 MCEVDKEGTKVYIGPLNWWRVRCTDFPHLANLARRMLAIPATQTESERLFSCAGNIVTKNRNKLSPTTIELLVLLRHSWKIVE 83
            M E DKEG KVY+ PL+WWRVRC DFPHLANLARR+LAIPATQ ESERLFSCAGNIVTKNRN L+PTT+ELLVLLRHSWKIVE
Sbjct:  209 MYEEDKEGAKVYLDPLDWWRVRCADFPHLANLARRVLAIPATQAESERLFSCAGNIVTKNRNNLAPTTVELLVLLRHSWKIVE 291          
BLAST of mRNA_H-elongata_contig141321.2865.1 vs. uniprot
Match: A0A6H5JPB0_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPB0_9PHAE)

HSP 1 Score: 114 bits (285), Expect = 7.410e-30
Identity = 54/60 (90.00%), Postives = 58/60 (96.67%), Query Frame = 0
Query:   24 TDFPHLANLARRMLAIPATQTESERLFSCAGNIVTKNRNKLSPTTIELLVLLRHSWKIVE 83
            TDFPHLANLARR+LAIPATQ +SERLFSCAGNIVTKNRN L+PTT+ELLVLLRHSWKIVE
Sbjct:  152 TDFPHLANLARRVLAIPATQAKSERLFSCAGNIVTKNRNNLAPTTVELLVLLRHSWKIVE 211          
BLAST of mRNA_H-elongata_contig141321.2865.1 vs. uniprot
Match: U9U296_RHIID (Dimer_Tnp_hAT domain-containing protein n=2 Tax=Rhizophagus irregularis TaxID=588596 RepID=U9U296_RHIID)

HSP 1 Score: 79.0 bits (193), Expect = 2.070e-16
Identity = 36/68 (52.94%), Postives = 48/68 (70.59%), Query Frame = 0
Query:   15 PLNWWRVRCTDFPHLANLARRMLAIPATQTESERLFSCAGNIVTKNRNKLSPTTIELLVLLRHSWKIV 82
            PL WW+   T FP L+ LAR+ LAIPAT T SERLFS AGN++T  R +L+P  +E LV  + +W++V
Sbjct:  116 PLTWWKTNKTRFPVLSKLARKYLAIPATSTPSERLFSEAGNVMTIKRTQLAPNMLENLVFCKKNWRLV 183          
BLAST of mRNA_H-elongata_contig141321.2865.1 vs. uniprot
Match: U9TMC6_RHIID (Uncharacterized protein (Fragment) n=2 Tax=Rhizophagus irregularis TaxID=588596 RepID=U9TMC6_RHIID)

HSP 1 Score: 75.5 bits (184), Expect = 2.150e-16
Identity = 35/64 (54.69%), Postives = 45/64 (70.31%), Query Frame = 0
Query:   16 LNWWRVRCTDFPHLANLARRMLAIPATQTESERLFSCAGNIVTKNRNKLSPTTIELLVLLRHSW 79
            L WWR+  T FP L+ LAR+ LAIPAT T SERLFS AGN++T  R +L+P  +E LV  + +W
Sbjct:    1 LTWWRINKTRFPVLSKLARKYLAIPATSTPSERLFSEAGNVMTIKRTQLAPNMLENLVFCKKNW 64          
BLAST of mRNA_H-elongata_contig141321.2865.1 vs. uniprot
Match: UPI001C151A4B (Hypothetical protein n=3 Tax=Rhizophagus irregularis TaxID=588596 RepID=UPI001C151A4B)

HSP 1 Score: 79.7 bits (195), Expect = 8.100e-16
Identity = 36/67 (53.73%), Postives = 48/67 (71.64%), Query Frame = 0
Query:   15 PLNWWRVRCTDFPHLANLARRMLAIPATQTESERLFSCAGNIVTKNRNKLSPTTIELLVLLRHSWKI 81
            PL WWR+  T FP L+ LAR+ LAIPAT T SERLFS AGN++T  R +L+P  +E LV  + +W++
Sbjct:  264 PLTWWRINKTRFPVLSKLARKYLAIPATSTPSERLFSEAGNVMTIKRTQLAPNILENLVFCKKNWRL 330          
BLAST of mRNA_H-elongata_contig141321.2865.1 vs. uniprot
Match: UPI001C15BA5C (Hypothetical protein n=3 Tax=Rhizophagus irregularis TaxID=588596 RepID=UPI001C15BA5C)

HSP 1 Score: 79.0 bits (193), Expect = 1.680e-15
Identity = 37/68 (54.41%), Postives = 47/68 (69.12%), Query Frame = 0
Query:   15 PLNWWRVRCTDFPHLANLARRMLAIPATQTESERLFSCAGNIVTKNRNKLSPTTIELLVLLRHSWKIV 82
            PL WW+     FP L+ LAR+ LAIPAT T SERLFS AGN+VT  R +L P T+E LV  + +W++V
Sbjct:  272 PLLWWKTNKAQFPILSKLARKYLAIPATSTPSERLFSEAGNVVTIKRTQLLPNTLENLVFCKKNWRLV 339          
BLAST of mRNA_H-elongata_contig141321.2865.1 vs. uniprot
Match: A0A1A7ZCN3_NOTFU (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Nothobranchius furzeri TaxID=105023 RepID=A0A1A7ZCN3_NOTFU)

HSP 1 Score: 72.8 bits (177), Expect = 6.170e-15
Identity = 34/67 (50.75%), Postives = 43/67 (64.18%), Query Frame = 0
Query:   15 PLNWWRVRCTDFPHLANLARRMLAIPATQTESERLFSCAGNIVTKNRNKLSPTTIELLVLLRHSWKI 81
            PL WW+     FP LA+LA+  L +PAT T SERLFS AGNIV+K R  LSP  I++L    +S  +
Sbjct:   33 PLQWWKSNEARFPSLASLAKSYLCVPATSTPSERLFSSAGNIVSKKRTSLSPEHIDMLTFFHYSTAV 99          
BLAST of mRNA_H-elongata_contig141321.2865.1 vs. uniprot
Match: UPI0011C102C8 (zinc finger BED domain-containing protein 1-like n=1 Tax=Sparus aurata TaxID=8175 RepID=UPI0011C102C8)

HSP 1 Score: 76.3 bits (186), Expect = 9.480e-15
Identity = 38/76 (50.00%), Postives = 49/76 (64.47%), Query Frame = 0
Query:    3 EVDKEGTKVYIGPLNWWRVRCTDFPHLANLARRMLAIPATQTESERLFSCAGNIVTKNRNKLSPTTIELLVLLRHS 78
            EVD E       PL WWR+  T+FP LANLA++ + IPAT   SER FS  GNIVT +R+ L P T++ LV L ++
Sbjct:  214 EVDAEAN-----PLEWWRLHQTNFPRLANLAKKYICIPATSAPSERAFSTGGNIVTCHRSALKPETVDKLVFLANN 284          
BLAST of mRNA_H-elongata_contig141321.2865.1 vs. uniprot
Match: A0A015N0K8_RHIIW (Dimer_Tnp_hAT domain-containing protein n=5 Tax=Rhizophagus irregularis TaxID=588596 RepID=A0A015N0K8_RHIIW)

HSP 1 Score: 75.1 bits (183), Expect = 1.090e-14
Identity = 35/68 (51.47%), Postives = 47/68 (69.12%), Query Frame = 0
Query:   15 PLNWWRVRCTDFPHLANLARRMLAIPATQTESERLFSCAGNIVTKNRNKLSPTTIELLVLLRHSWKIV 82
            PL WW+   T F  L+ LAR+ LAIPAT T SERLFS AGN++T  R +L+P  +E LV  + +W++V
Sbjct:  146 PLTWWKTNKTRFLVLSKLARKYLAIPATSTPSERLFSEAGNVMTIKRTQLAPNMLENLVFCKKNWRLV 213          
BLAST of mRNA_H-elongata_contig141321.2865.1 vs. uniprot
Match: A0A2Z6SJS1_9GLOM (Zinc finger BED domain-containing protein 1-like n=1 Tax=Rhizophagus clarus TaxID=94130 RepID=A0A2Z6SJS1_9GLOM)

HSP 1 Score: 75.5 bits (184), Expect = 1.220e-14
Identity = 35/68 (51.47%), Postives = 45/68 (66.18%), Query Frame = 0
Query:   15 PLNWWRVRCTDFPHLANLARRMLAIPATQTESERLFSCAGNIVTKNRNKLSPTTIELLVLLRHSWKIV 82
            P NWW      FP L+ +AR+ LAIPAT T SERLFS AGN++T  R  L P+T E L+ L+ +W +V
Sbjct:  177 PFNWWSKNENRFPILSKMARKYLAIPATSTPSERLFSDAGNLMTVRRTSLLPSTFEHLLFLKRNWDLV 244          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig141321.2865.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JWI1_9PHAE2.530e-4485.54Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec... [more]
A0A6H5JPB0_9PHAE7.410e-3090.00Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec... [more]
U9U296_RHIID2.070e-1652.94Dimer_Tnp_hAT domain-containing protein n=2 Tax=Rh... [more]
U9TMC6_RHIID2.150e-1654.69Uncharacterized protein (Fragment) n=2 Tax=Rhizoph... [more]
UPI001C151A4B8.100e-1653.73Hypothetical protein n=3 Tax=Rhizophagus irregular... [more]
UPI001C15BA5C1.680e-1554.41Hypothetical protein n=3 Tax=Rhizophagus irregular... [more]
A0A1A7ZCN3_NOTFU6.170e-1550.75Dimer_Tnp_hAT domain-containing protein n=1 Tax=No... [more]
UPI0011C102C89.480e-1550.00zinc finger BED domain-containing protein 1-like n... [more]
A0A015N0K8_RHIIW1.090e-1451.47Dimer_Tnp_hAT domain-containing protein n=5 Tax=Rh... [more]
A0A2Z6SJS1_9GLOM1.220e-1451.47Zinc finger BED domain-containing protein 1-like n... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008906HAT, C-terminal dimerisation domainPFAMPF05699Dimer_Tnp_hATcoord: 13..76
e-value: 1.9E-17
score: 62.8
NoneNo IPR availablePANTHERPTHR46169FAMILY NOT NAMEDcoord: 11..80
NoneNo IPR availablePANTHERPTHR46169:SF3coord: 11..80
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 13..80

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig141321contigH-elongata_contig141321:1177..1425 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig141321.2865.1mRNA_H-elongata_contig141321.2865.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig141321 1156..1425 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig141321.2865.1 ID=prot_H-elongata_contig141321.2865.1|Name=mRNA_H-elongata_contig141321.2865.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=83bp
MCEVDKEGTKVYIGPLNWWRVRCTDFPHLANLARRMLAIPATQTESERLF
SCAGNIVTKNRNKLSPTTIELLVLLRHSWKIVE
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008906HATC_C_dom
IPR012337RNaseH-like_sf