mRNA_H-elongata_contig14121.2855.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig14121.2855.1
Unique NamemRNA_H-elongata_contig14121.2855.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig14121.2855.1 vs. uniprot
Match: D7G2V0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G2V0_ECTSI)

HSP 1 Score: 380 bits (976), Expect = 3.380e-124
Identity = 204/354 (57.63%), Postives = 236/354 (66.67%), Query Frame = 2
Query:  239 KVAVVTGANKGIGLAIAKKLAQTPEHICVLTSRDRARGEKAVDNLKNEGI-TVVFKQLDIGDTASVERFASEMEEEYGRCDVLVNNAAIAFKGSDPTPFRDQVEPTLKTNFFDTVAFTERMLPLVRKSPAGRVVNMASMSGQLSILKSGDMRDAFTSPVLTKEALLRLMTEFVNDVKSGQHAAKGWPNTCYGMSKLGIIAYTNVAARIE--AGSRVLVNSCCPGNPYADGSQGEKVCDSVRVPNRVKSNTLGTRRWTGSDAMDAYKRSSTRAKNKSAHSLRRLYRVLLEVNFASALCVVCRRETGYCDTDMTSHRGHLTPEEGARTPFMLTQMKDLTDGGVTGGFFQRGALSRW 1291
            +++VVTGANKGIGLAIAKKLA  P H+CVLTSR  A G+KAVD+LK EG+ +VV+KQLDIGD ASVERFASE+E+E+GRCDVLVNNA IAFKGSDPTPF+DQ EPTLKTNFFDT AFTE+MLPLVRKS AGRVVN+ASM+G LSIL S D R+AFT+P LTKE L  +M +FV DVK+G+H   GWPNTCYGMSKLG+IAYT VAAR+E  AGS V +N+CCPG                                                                                 YCDTDMTSHRG LTPEEGARTPFMLTQMK + +GG+TG FF++ AL+ W
Sbjct:   32 RISVVTGANKGIGLAIAKKLAGAPGHLCVLTSRTPALGQKAVDDLKEEGLESVVYKQLDIGDPASVERFASELEQEFGRCDVLVNNAGIAFKGSDPTPFKDQAEPTLKTNFFDTAAFTEKMLPLVRKSDAGRVVNVASMAGHLSILGSQDRRNAFTNPALTKERLSAMMAQFVGDVKAGRHQGGGWPNTCYGMSKLGVIAYTKVAARVEREAGSTVTINACCPG---------------------------------------------------------------------------------YCDTDMTSHRGTLTPEEGARTPFMLTQMKSVDEGGLTGEFFRKEALAEW 304          
BLAST of mRNA_H-elongata_contig14121.2855.1 vs. uniprot
Match: A0A7S2UVT3_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UVT3_9STRA)

HSP 1 Score: 249 bits (635), Expect = 1.280e-73
Identity = 137/265 (51.70%), Postives = 175/265 (66.04%), Query Frame = 2
Query:  242 VAVVTGANKGIGLAIAKKLAQTPEHICVLTSRDRARGEKAVDNLKNEGITV-----VFKQLDIGDTASVERFASEMEEEYGRCDVLVNNAAIAFKGSDPTPFRDQVEPTLKTNFFDTVAFTERMLPLVRKSPAGRVVNMASMSGQLSILKSGDMRDAFTSPVLTKEALLRLMTEFVNDVKSGQHAAKGWPNTCYGMSKLGIIAYTNVAARIEAGSRVLVNSCCPGNPYAD---GSQGEKVCDSVRVPNRVKSNTLGTRR---WTG 1003
            +AVVTG+NKGIG  +A KLA TP  IC++ +RD  RG++A   +   G T      VFKQLDI D  SV+RF  EM+ EYGR DVLVNNAAIAFKG+DPTPF+ Q  PTL+TNF+ TV  T+ +LPL+R+SPA R+VN+ASMSG L IL S + +D F+S  LT+  L  LM  F  DV++G H   GWP+TCYGMSKLG+IA+T + AR E G  ++VN CCPG    D   GS  +   +  R P  +     GT+    W+G
Sbjct:   29 IAVVTGSNKGIGKEVAIKLASTPNTICIVAARDMNRGQQAAQEVNIAGQTAGGGGAVFKQLDIADNTSVQRFMQEMQSEYGRLDVLVNNAAIAFKGADPTPFQYQAAPTLRTNFWATVQVTDALLPLLRQSPAARIVNVASMSGHLRIL-SHERQDIFSSSSLTRPVLYDLMRAFEADVQAGVHHQNGWPSTCYGMSKLGVIAFTKILAREEPG--MVVNCCCPGGCRTDMSSGSGSKTAEEGARTPYLLTQMPPGTKSGGFWSG 290          
BLAST of mRNA_H-elongata_contig14121.2855.1 vs. uniprot
Match: A0A836C9X3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9X3_9STRA)

HSP 1 Score: 238 bits (607), Expect = 7.770e-70
Identity = 130/242 (53.72%), Postives = 162/242 (66.94%), Query Frame = 2
Query:  230 MLSKVAVVTGANKGIGLAIAKKLAQTPEHICVLTSRDRARGEKAVDNLKNEGITVVFKQLDIGDTASVERFASEMEEEY-GRCDVLVNNAAIAFKGSDPTPFRDQVEPTLKTNFFDTVAFTERMLPLVRKSPAGRVVNMASMSGQLSILKSGDMRDAFTSPV----LTKEALLRLMTEFVNDVKSGQHAAKGWPNTCYGMSKLGIIAYTNVAARIEAGSRVLVNSCCPGNPYAD--GSQGEK 934
            M ++V +VTGANKGIGL IA+KL +    +CVLT+RD  RG  A ++L +EG  V F+QLDI D  S ERFA + E+E+    D LVNNA  AFKGSDPTPF +Q EPT+  NFF TVA TER+LPLV++SP GR+VN+ASMSG L I+   ++R  F S      L  + L+ L   FV DVK G+H  KGWPN+CYGMSKL +IAYT + A  E    + VN+CCPG    D  G QG K
Sbjct:    1 MSARVGIVTGANKGIGLEIARKLGREQGWLCVLTARDEERGRSAAESLLSEGAGVRFRQLDISDPDSRERFAKDAEQEFTAGIDALVNNAGFAFKGSDPTPFAEQAEPTMDINFFSTVATTERLLPLVKRSPHGRIVNVASMSGHLRIVPDAELRAKFASAGQPGGLGHDELMLLARGFVQDVKEGKHKEKGWPNSCYGMSKLCLIAYTKILAAREP--TLKVNACCPGYVATDMSGQQGHK 240          
BLAST of mRNA_H-elongata_contig14121.2855.1 vs. uniprot
Match: A0A7S0XB88_9STRA (Hypothetical protein n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0XB88_9STRA)

HSP 1 Score: 233 bits (593), Expect = 1.210e-67
Identity = 136/349 (38.97%), Postives = 187/349 (53.58%), Query Frame = 2
Query:  221 VEAMLSKVAVVTGANKGIGLAIAKKLAQTPEHICVLTSRDRARGEKAVDNLKNEGITVVFKQLDIGDTASVERFASEMEEEYGRCDVLVNNAAIAFKGSDPTPFRDQVEPTLKTNFFDTVAFTERMLPLVRKSPAGRVVNMASMSGQLSILKSGDMRDAFTSPVLTKEALLRLMTEFVNDVKSGQHAAKGWPNTCYGMSKLGIIAYTNVAARIEAGSRVLVNSCCPGNPYADGSQGEKVCDSVRVPNRVKSNTLGTRRWTGSDAMDAYKRSSTRAKNKSAHSLRRLYRVLLEVNFASALCVVCRRETGYCDTDMTSHRGHLTPEEGARTPFMLTQMKDLTDGGVTGGFF 1267
            + +++S +AVVTG+NKGIG  I KKL+    +  +L +R+   G +A +NL+++G+ V F++LDI    S++ F ++++ +YG+CDVLVNNAAIAFKGSDPTPF+ Q EPT+KTN+F T++ T+ MLPL++ S + R+VN+AS +G L IL S + +  FTS  LT + L   M +FVNDVK+ +     WP +CYG SKLG+IA T V AR      +L+N+CCPG                                                                                 YC TDM+SHRG  T E GARTPF L     LT G VTG FF
Sbjct:   15 IASVMSTIAVVTGSNKGIGYEIVKKLSSIG-YKTILAARNVNLGSQAANNLRSQGLDVEFRELDISSDESIKAFVNKLQSDYGKCDVLVNNAAIAFKGSDPTPFKLQAEPTIKTNYFGTLSLTKLMLPLLQNSTSPRIVNVASQAGALGILPSNERKKFFTSESLTVDELTEAMNQFVNDVKNDKLKENDWPGSCYGTSKLGVIALTKVLARNYPD--ILINACCPG---------------------------------------------------------------------------------YCQTDMSSHRGTRTAENGARTPFYLAT---LTAGSVTGKFF 276          
BLAST of mRNA_H-elongata_contig14121.2855.1 vs. uniprot
Match: A0A7S3GV84_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GV84_9STRA)

HSP 1 Score: 218 bits (555), Expect = 2.880e-62
Identity = 132/356 (37.08%), Postives = 181/356 (50.84%), Query Frame = 2
Query:  239 KVAVVTGANKGIGLAIAKKLAQTPEHICVLTSRDRARGEKAVDNLKNEGITVVFKQLDIGDTASVERFASEMEEEYGRCDVLVNNAAIAFKGSDPTPFRDQVEPTLKTNFFDTVAFTERMLPLVRKSPAGRVVNMASMSGQLSILKSGDMRDAFTS-PVLTKEALLRLMTEFVNDVKSGQHAAKGWPNTCYGMSKLGIIAYTNVAARIEA----GSRVLVNSCCPGNPYADGSQGEKVCDSVRVPNRVKSNTLGTRRWTGSDAMDAYKRSSTRAKNKSAHSLRRLYRVLLEVNFASALCVVCRRETGYCDTDMTSHRGHLTPEEGARTPFMLTQMKDLTDGGVTGGFFQRGALSRW 1291
            K+A+VTG NKGIG  I KKL      I +L  R+   G++A  NLK  G  V ++ LDI D  S+ RF+ ++ +EYG  D+LVNNAAIAFK SDPTPF++Q  PT++ NFF T+  TE ++PL++K+ + R+VN+AS SG L ILKS ++++ F + P +  +AL  L+ E+V+ V+ G H  KGWPN+ YG+SKL +IA T + A+ EA    G   L+N+CCPG                                                                                 YCDTDMTSH+G    E GARTP ML  + ++     TG FF   A   W
Sbjct:    2 KLAIVTGGNKGIGYEICKKLGAAGVKI-ILACRNEVLGQEAAANLKELGYDVEYRNLDISDDWSIARFSRDISDEYGHVDILVNNAAIAFKESDPTPFKEQTLPTIEPNFFGTMRITESLMPLLQKAESPRIVNVASQSGHLRILKSEELKERFVNCPSI--DALENLVNEYVSSVQDGTHTEKGWPNSNYGISKLAVIALTRILAKREAEANPGKNFLINACCPG---------------------------------------------------------------------------------YCDTDMTSHKGPRPAEHGARTPAMLALLSEVGPVAPTGKFFFDEAEVEW 273          
BLAST of mRNA_H-elongata_contig14121.2855.1 vs. uniprot
Match: A0A7S0F9Q4_9DINO (Hypothetical protein n=1 Tax=Pyrodinium bahamense TaxID=73915 RepID=A0A7S0F9Q4_9DINO)

HSP 1 Score: 213 bits (541), Expect = 8.490e-60
Identity = 133/356 (37.36%), Postives = 184/356 (51.69%), Query Frame = 2
Query:  224 EAMLSKVAVVTGANKGIGLAIAKKLAQTPEHICVLTSRDRARGEKAVDNLKNEGITVVFKQLDIGDTASVERFASEMEEEYGRCDVLVNNAAIAFKGSDPTPFRDQVEPTLKTNFFDTVAFTERMLPLVRKSPAGRVVNMASMSGQLSILKSGDMRDAFTSPVLTKEALLRLMTEFVNDVKSGQHAAKGWPNTCYGMSKLGIIAYTNVAARIEAGSRVLVNSCCPGNPYADGSQGEKVCDSVRVPNRVKSNTLGTRRWTGSDAMDAYKRSSTRAKNKSAHSLRRLYRVLLEVNFASALCVVCRRETGYCDTDMTSHRGHLTPEEGARTPFMLTQMKDLTDGGVTGGFFQRGALSRW 1291
            E   +++AVVTGANKGIG   A++L +      +   RD  RG++A  +L  E     F QLDI D  S+  F   +  +YGR DVLVNNAAIAFKG+DPTPF+ Q  PTL+TNF+ TVA T+++LPL+R+  + RVVN+ASM+G+L  + SG ++  F+SP LT++ L  L+ +F +DV +G+H  +GW N+ YG+SKL +IAYT + AR E G+ +  N+CCPG                                                                                 YCDTDM+SHRG  +P EGAR   ML  ++D    G TG F +   +S W
Sbjct:   43 EQATARIAVVTGANKGIGYHTAEQLVKAGGLRVIAACRDPDRGQQAARHLGAE-----FVQLDISDEGSIGAFVQYIASKYGRLDVLVNNAAIAFKGADPTPFQGQTLPTLRTNFWGTVALTDQLLPLLRRGRSPRVVNVASMAGRLGQV-SGSLQRRFSSPALTRDELFALVRKFQDDVAAGRHRQEGWGNSNYGLSKLALIAYTLLVAR-EEGNAMRANACCPG---------------------------------------------------------------------------------YCDTDMSSHRGPRSPAEGARNATMLALLRD---DGPTGAFVRDMQISEW 307          
BLAST of mRNA_H-elongata_contig14121.2855.1 vs. uniprot
Match: W7T5T2_9STRA (Carbonyl reductase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7T5T2_9STRA)

HSP 1 Score: 211 bits (536), Expect = 9.480e-59
Identity = 112/231 (48.48%), Postives = 156/231 (67.53%), Query Frame = 2
Query:  242 VAVVTGANKGIGLAIAKKLAQTPEHICVLTSRDRARGEKAVDNLKNEGI-TVVFKQLDIGDTASVERFASEMEEEYGRCDVLVNNAAIAFKGSDPTPFRDQVEPTLKTNFFDTVAFTERMLPLVRKSPAGR-VVNMASMSGQLSILKSGDMRDA-FTSPVLTKEALLRLMTEFVNDVKSGQHAAKGWPNTCYGMSKLGIIAYTNVAAR--IEAGSR------VLVNSCCPG 901
            + +VTG+NKGIGL I KKLA T   + +L +R+ + GE+A   L++ G+  V ++ LD+    S+E F  E++++YGR D+LVNNA IAFKG DPTPFRDQ  PT KTNF+ TV   + M PL+RKS     +VN+AS SG+LSIL +   + A  +SP+LT++ L  L+ +F +DV++G HA  GWPNTCYGMSKL +IA+  V AR  +E G+       + + SCCPG
Sbjct:   56 ITIVTGSNKGIGLEILKKLAPTSS-VAILAARNPSLGEQAAQELRDHGLENVKYRPLDVSSAESIEHFVKEIQKDYGRADILVNNAGIAFKGRDPTPFRDQAAPTFKTNFWGTVELIDAMTPLLRKSTGCPCIVNVASQSGRLSILDTDRGKQAEISSPILTRDRLFELVRQFEHDVRTGTHAENGWPNTCYGMSKLALIAFGRVFARNEMEGGTEKEGKTSIWLASCCPG 285          
BLAST of mRNA_H-elongata_contig14121.2855.1 vs. uniprot
Match: K0TIM0_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TIM0_THAOC)

HSP 1 Score: 210 bits (535), Expect = 1.860e-57
Identity = 128/256 (50.00%), Postives = 160/256 (62.50%), Query Frame = 2
Query:  173 RLLLQIKLLIICLIDPVEAMLSKVAVVTGANKGIGLAIAKKLAQTPEHI-CVLTSRDRARGEKAVDNLKN-----EGITVVFKQLDIGDTASVERFASEMEEEYGRCDVLVNNAAIAFKGSDPTPFRDQVEPTLKTNFFDTVAFTERMLPLVRKSPAGRVVNMASMSGQLSILKSGDMRDAFTSPVLTKEALLRLMTEFVNDVKSGQHAAKGWPNTCYGMSKLGIIAYTNVAARIEAGSRVLVNSCCPGNPYADGS 922
            R++L + +LI C     E M S+VAVVTGANKGIG  IA  LA +      VL  RD ARG +AV+ + +         V  +QL IG   S + F + M E YG+ DVLVNNA IAFKGSDPTPF  Q +PTL  NF+ TV FTE MLPL+RK    R+VN+ASM+G L  L+S +++  F+SP LTK+ L  L+ EF  DV SG+H   GW N+ YGMSKL +IA T + AR E G  + VN CCPG    D S
Sbjct:    5 RIILFLSILIRCSQALSETM-SRVAVVTGANKGIGFHIAAGLASSGLFSDVVLGCRDEARGRQAVETIASLPGTPRSCRVSCRQLAIGSRESHDAFIAGMTERYGKVDVLVNNAGIAFKGSDPTPFEGQCKPTLAVNFWGTVDFTEEMLPLLRKGSDARIVNVASMAGHLGQLRSRELQRKFSSPDLTKDELFSLVEEFQRDVLSGRHTGAGWGNSNYGMSKLALIAMTKIWAREEEGD-ISVNCCCPGYCATDMS 258          
BLAST of mRNA_H-elongata_contig14121.2855.1 vs. uniprot
Match: A0A7S2LP57_9STRA (Hypothetical protein (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2LP57_9STRA)

HSP 1 Score: 204 bits (520), Expect = 1.060e-56
Identity = 110/247 (44.53%), Postives = 158/247 (63.97%), Query Frame = 2
Query:  236 SKVAVVTGANKGIGLAIAKKLAQTPEHICVLTSRDRARGEKAVDNLKNEG-----ITVVFKQLDIGDTASVERFASEMEEEYGRCDVLVNNAAIAFKGS------DPTPFRDQVEPTLKTNFFDTVAFTERMLPLVRKSPAGRVVNMASMSGQLSILKSGDMRDAFTSPVLTKEALLRLMTEFVNDVKSGQHAAKGWPNTCYGMSKLGIIAYTNVAARIEAGSRVLVNSCCPGNPYADGSQGEKVCD 943
            +K+A++TG NKGIG  IA+++   P    ++ SRD A G+KA D+LK  G     +  +   LD+ D  S+   A  +E+EYGR DVL+NNAAI F         D TPF++Q + T++TN+F T+  T+  LPL++++ + R++N+AS +G+L+IL+S ++ D FTS  LT+  L  LM +FVNDV+SG H  KGWPNTCYGMSKLGIIA T + AR   G  +L+NS  PG    D +  +   D
Sbjct:   43 NKIALITGGNKGIGKEIARRIGTEPGFTAIIASRDVALGQKAADDLKESGEYECDVVALPVPLDLTDDNSIIAAAKHVEKEYGRLDVLINNAAICFNDPTLYGKVDHTPFQNQADITIRTNYFGTLKVTKECLPLLKQAASPRIINVASAAGRLTILRSQELVDKFTSNTLTEPQLSTLMEQFVNDVQSGTHEEKGWPNTCYGMSKLGIIALTKILARENEG--MLINSVDPGYCKTDQNNNQGTVD 287          
BLAST of mRNA_H-elongata_contig14121.2855.1 vs. uniprot
Match: A0A6U0U495_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A6U0U495_9STRA)

HSP 1 Score: 202 bits (513), Expect = 4.740e-56
Identity = 117/240 (48.75%), Postives = 148/240 (61.67%), Query Frame = 2
Query:  230 MLSKVAVVTGANKGIGLAIAKKLAQT-------PEHICVLTSRDRARGEKAVDNLKNEG----ITVVFKQLDIGDTASVERFASEMEEEYGRCDVLVNNAAIAFKGSDPTPFRDQVEPTLKTNFFDTVAFTERMLPLVRKSPAG-----RVVNMASMSGQLSILKSGDMRDAFTSPVLTKEALLRLMTEFVNDVKSGQHAAKGWPNTCYGMSKLGIIAYTNVAARIEAGSRVLVNSCCPG 901
            M   V VVTGANKGIGL I  + A         P    +L +RD ARGE AV+ L+  G      V FKQLDI D  S +RF ++++EE+G+ D LVNNAAIAFKGSDPTPF +Q EPTL  NF+ T AF + MLPL++ +        R+VN+ASMSG L ILKS ++RD F    LT++ L  LM  F  +V    +   G+P++ YGMSKLG+IAY+ V AR      V   SCCPG
Sbjct:    1 MAGSVIVVTGANKGIGLNIVTRFAHAAAEALAPPLPTVLLCARDAARGEAAVEQLRANGGDPASVVKFKQLDISDEESRKRFVADVQEEFGKVDCLVNNAAIAFKGSDPTPFEEQTEPTLNVNFYSTCAFIDEMLPLLQAAAEAEDAKPRIVNVASMSGHLRILKSNELRDQFARDSLTRDELFGLMDRFRTEVADHTYKKSGFPSSNYGMSKLGVIAYSRVLARENPDIDVF--SCCPG 238          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig14121.2855.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G2V0_ECTSI3.380e-12457.63Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S2UVT3_9STRA1.280e-7351.70Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A836C9X3_9STRA7.770e-7053.72Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S0XB88_9STRA1.210e-6738.97Hypothetical protein n=1 Tax=Chromulina nebulosa T... [more]
A0A7S3GV84_9STRA2.880e-6237.08Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A7S0F9Q4_9DINO8.490e-6037.36Hypothetical protein n=1 Tax=Pyrodinium bahamense ... [more]
W7T5T2_9STRA9.480e-5948.48Carbonyl reductase n=2 Tax=Monodopsidaceae TaxID=4... [more]
K0TIM0_THAOC1.860e-5750.00Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]
A0A7S2LP57_9STRA1.060e-5644.53Hypothetical protein (Fragment) n=1 Tax=Skeletonem... [more]
A0A6U0U495_9STRA4.740e-5648.75Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig14121contigH-elongata_contig14121:125..5094 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score381.3
Seed ortholog evalue5.4e-103
Seed eggNOG ortholog2880.D7G2V0
KEGG rclassRC00154,RC00205,RC00823,RC01491
KEGG koko:K00079
KEGG ReactionR02581,R02975,R04285,R09420
KEGG Pathwayko00590,ko00790,ko00980,ko01100,ko05204,map00590,map00790,map00980,map01100,map05204
EggNOG free text desc.oxidation-reduction process
EggNOG OGsCOG1028@1,KOG1208@2759
Ec32 ortholog descriptionShort-chain dehydrogenase/reductase SDR
Ec32 orthologEc-07_005600.1
EC1.1.1.184,1.1.1.189,1.1.1.197
COG Functional cat.IQ
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Hectar predicted targeting categorysignal peptide
Exons8
Model size2069
Cds size1194
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig14121.2855.1prot_H-elongata_contig14121.2855.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig14121 225..4319 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929839.4931414-UTR-H-elongata_contig14121:124..2241622929839.4931414-UTR-H-elongata_contig14121:124..224Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig14121 125..224 +
1691679178.4925375-UTR-H-elongata_contig14121:124..2241691679178.4925375-UTR-H-elongata_contig14121:124..224Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig14121 125..224 +
1622929839.6003048-UTR-H-elongata_contig14121:4319..50941622929839.6003048-UTR-H-elongata_contig14121:4319..5094Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig14121 4320..5094 +
1691679178.6017804-UTR-H-elongata_contig14121:4319..50941691679178.6017804-UTR-H-elongata_contig14121:4319..5094Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig14121 4320..5094 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929839.5134356-CDS-H-elongata_contig14121:224..3931622929839.5134356-CDS-H-elongata_contig14121:224..393Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig14121 225..393 +
1691679178.5097659-CDS-H-elongata_contig14121:224..3931691679178.5097659-CDS-H-elongata_contig14121:224..393Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig14121 225..393 +
1622929839.5279508-CDS-H-elongata_contig14121:1180..13471622929839.5279508-CDS-H-elongata_contig14121:1180..1347Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig14121 1181..1347 +
1691679178.5185466-CDS-H-elongata_contig14121:1180..13471691679178.5185466-CDS-H-elongata_contig14121:1180..1347Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig14121 1181..1347 +
1622929839.5389626-CDS-H-elongata_contig14121:1729..18271622929839.5389626-CDS-H-elongata_contig14121:1729..1827Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig14121 1730..1827 +
1691679178.530153-CDS-H-elongata_contig14121:1729..18271691679178.530153-CDS-H-elongata_contig14121:1729..1827Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig14121 1730..1827 +
1622929839.5492303-CDS-H-elongata_contig14121:2202..22831622929839.5492303-CDS-H-elongata_contig14121:2202..2283Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig14121 2203..2283 +
1691679178.545501-CDS-H-elongata_contig14121:2202..22831691679178.545501-CDS-H-elongata_contig14121:2202..2283Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig14121 2203..2283 +
1622929839.5583947-CDS-H-elongata_contig14121:2673..27781622929839.5583947-CDS-H-elongata_contig14121:2673..2778Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig14121 2674..2778 +
1691679178.5559132-CDS-H-elongata_contig14121:2673..27781691679178.5559132-CDS-H-elongata_contig14121:2673..2778Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig14121 2674..2778 +
1622929839.5678797-CDS-H-elongata_contig14121:3279..34031622929839.5678797-CDS-H-elongata_contig14121:3279..3403Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig14121 3280..3403 +
1691679178.5676992-CDS-H-elongata_contig14121:3279..34031691679178.5676992-CDS-H-elongata_contig14121:3279..3403Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig14121 3280..3403 +
1622929839.5797126-CDS-H-elongata_contig14121:3622..36771622929839.5797126-CDS-H-elongata_contig14121:3622..3677Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig14121 3623..3677 +
1691679178.5826926-CDS-H-elongata_contig14121:3622..36771691679178.5826926-CDS-H-elongata_contig14121:3622..3677Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig14121 3623..3677 +
1622929839.5900724-CDS-H-elongata_contig14121:3924..43191622929839.5900724-CDS-H-elongata_contig14121:3924..4319Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig14121 3925..4319 +
1691679178.5916514-CDS-H-elongata_contig14121:3924..43191691679178.5916514-CDS-H-elongata_contig14121:3924..4319Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig14121 3925..4319 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig14121.2855.1

>prot_H-elongata_contig14121.2855.1 ID=prot_H-elongata_contig14121.2855.1|Name=mRNA_H-elongata_contig14121.2855.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=398bp
MLSGGFPKKLMPTSTQSFHFSTLFRLLLQIKLLIICLIDPVEAMLSKVAV
VTGANKGIGLAIAKKLAQTPEHICVLTSRDRARGEKAVDNLKNEGITVVF
KQLDIGDTASVERFASEMEEEYGRCDVLVNNAAIAFKGSDPTPFRDQVEP
TLKTNFFDTVAFTERMLPLVRKSPAGRVVNMASMSGQLSILKSGDMRDAF
TSPVLTKEALLRLMTEFVNDVKSGQHAAKGWPNTCYGMSKLGIIAYTNVA
ARIEAGSRVLVNSCCPGNPYADGSQGEKVCDSVRVPNRVKSNTLGTRRWT
GSDAMDAYKRSSTRAKNKSAHSLRRLYRVLLEVNFASALCVVCRRETGYC
DTDMTSHRGHLTPEEGARTPFMLTQMKDLTDGGVTGGFFQRGALSRW*
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mRNA from alignment at H-elongata_contig14121:125..5094+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig14121.2855.1 ID=mRNA_H-elongata_contig14121.2855.1|Name=mRNA_H-elongata_contig14121.2855.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=4970bp|location=Sequence derived from alignment at H-elongata_contig14121:125..5094+ (Himanthalia elongata Himel1 dioecious)
GTTCTCGAAGTTCTTGAAGTTCTTAAAGTTCTTGAAGTTTATCTTGAAAG CCATCCAGGTAAAATTAAACCCATATGTTGACAGTCCTGCGGTGCATTCA ATGCTCTCTGGGGGATTCCCCAAAAAACTGATGCCTACCTCCACGCAGTC TTTTCACTTCTCCACGCTTTTCAGGCTTCTGCTTCAGATAAAATTATTGA TTATTTGCCTGATCGATCCAGTGGAGGCAATGCTCTCGAAAGTGGCAGTC GTCACGGGAGCGAACAAAGGCAAGCCGAGCCAAGCTTTTCATGCTGCGGT ACGATAACTGGTAGGGTGCTCGCGGGACTAACGAAGAAGACGTATTTTAT TTTACGCGACTCGATCTTGTGATGTATACCGTTACATCACCATCTCATGG AACTCGAAGTTCGAACAAGCCTGAACAACAAGTTCGATAGCGTATTCTCT GCCGCCCTTGGTGCGCTCGCGCGTAGAGAGGGGGAAACATAACATGCGTT TCAACTTGACCGACAAGAATATTCTAAAATAACGAAATATATTATCCAAC AATAAATCAGACTAGCCAACCGAACGAAGGGCTACATACTGAAAGTGGTT AACATTTGCTCGTATGAATGATTCAAGTGGAGGGATTAAACACAAGCACC GAGGAACCAACAACGAATTGACCTCCGTGTTCAACATAACGAAAACCATT ATTTATCTTCGCCAACCCTGTTGTAGCGCGAGGCGATGATTTTATTTCCT TTTTGTTTTGAACGAAGCACGATATATTTAGCTCTACAAAAGTTCTAGAA GAGTTGAAGCAGACGACCAATGTTTATTCCAGCACAAGTAAAAACAAGGT CCGAGCTTGTACTCATAGCTAAACTCACCGGCTGAGCTCGCCGGCTGTGA TGATGTCATCAGAGAGATCATGTTGCATGTACCGCCTCGATCCACTTGAT TTGGAACATTAAGAACCTTATATTGATAGTTTTTGGATCCAGACATCCAG ACTTGAGACTCTCTACCTTATTAACGTCATCACCCCCAAACGATTGTCGT CGACAGGGATCGGGCTCGCGATCGCAAAGAAACTAGCGCAGACCCCAGAG CACATCTGCGTCCTGACCTCGCGTGATCGTGCGCGGGGAGAGAAGGCGGT CGACAACCTCAAGAATGAAGGCATCACGGTGGTGTTCAAGCAGCTTGATA TCGGAGATACGGCATCCGTCGAGGTAAATGTTGGAGTCGTGCGTTCTCCA GTATCACGCGGTACGACTAGGAAAGAGAAGAGAATGGTGGTGGTAGTTGG GTGGGGGGGGGGCTGAAACCATGCTCGGATATCGCTTTTCTGTATAGTAA AACCCAGCACGCTCGAAGTGCCGCGGACAAGTTAATCCGCGCTTATCACC TGGCATCCAATACTTCCCGACCGTTCTGTCCGGCGAGAGACATTTATTCT GGTCTACCCTGGGCGGTGTGCCCAACCCCGCGCTCTTCTCAGATACTTGA TCGAGTCCCCGATGTACGAAGAATCTTCGCATGTTGTTTGTGAATATAAT CCTCGCTCGCACGTCTCCGCTCATAGAGATTTTCGTCGTTGTTCCATCTC GTCAGCGCTTCGCGTCTGAGATGGAGGAGGAGTACGGTCGTTGCGACGTG CTCGTCAACAACGCCGCCATCGCCTTCAAAGGTAGCGACCCCACGCCTTT CAGGTGAGTTTCGCACGTACGAGCTCGCAGCAAACGTTACGTCACGTGCC CCCGTGCGAAGAACAGGGAAGGCTTAAGGCTTCTTGATCGTATGCCAGGG GGAAAAAACGTACGATACCCTGCCACGGTGCTTCCCGCGTGGTGTGGTCC ATCTCAGGTGTACGAATCCCCCTGCTGTAAGGCGATGCGAACTAACATTC GAATTTCCAACGCTTTTTTTTTTTTCACCGCTAATTAATAGTTAACGGCT CACAGTTAACGGACGGCCGAACGATAAGTTCTTTATACGGACGGGCGCTC TTTTTTTCTCCGTCCCCGGATTCCCCTGTCCTTCTTCCCTCGGTACCCTC TCTTTTCCCACCATTGTGCGCGATCCAGGGACCAAGTGGAACCCACCTTG AAGACCAACTTCTTCGACACCGTCGCCTTCACGGAGAGAATGCTACCGCT CGTGAGAAAGTGCGCATGAAGCCTCGCTTGGCCACGCCTTTGATCTTCAT TTTCCTACCCCGCTCTGCTCTGCCCTGCCCTGCCCTGCCCTGCATTAAAA TAAAATTAGGTTTATTTGAAAATCTGATGTATTTTTATCTACTGGAACAC AAAACTAAATCGGATCCAGGTCCTCGCCCTGCACCCTGCCTTACCCTGCC TTACCTTACCTCACCCAACCCGATTTCTTGTGGTAAAGGGTTTTGTCACT TCGCTGGAACCAAAGCAGCGCATGGTGTTAAAACGATTGCGTCAAACATT ATTGTCTCTCTGTCTCTCTCTCTCTAGATATATACCGGAGTAGATAGACT ATTAATCGACATAGATTTTGGGTTTTCTCGGTTGCGGGTATGTTTGCAGG AGTCCGGCTGGTCGAGTTGTCAACATGGCAAGCATGAGCGGTCAGCTATC GATCCTGAAGAGCGGCGACATGCGCGACGCCTTTACAAGTCCCGTCCTGA CAAAGTAAGAGCATCGCTGCGATAGGGCTGCGATAAGGATCCCGTAAAAT ATTATTGGCGGTGGGTTGTTGACAGGAGATCGCGGAATGGAAAAAGCGAA AAGGCCTAGGCGTTGCGTGCTGAGCTTCCCCCGAAACGTCTCTTGCGCGC AGCGCACGTTTTTTTTTTCGACCTTCCGGCTTGCCTACACGTTTTCCGCG AGGTGTGTGCACGGAGGAAGGTCTTTGCCCCCATTCTTACACAGAATAGA CATGGCAAGGATGTTGTTTTTTTTCTCGTGGAAGATATCCGTTGTGCTTT ACGAATAATAGAGCGCCAGGTTCCGCCGAACTTGTGAGCTCTCGTCCGCG AATGCGTAGGTGCCCCGTCCTGGGTCGAAAATAATGACATCCCTGATAGG AGCAGTATGTTGTAGACATACCAGTCCATGCGCGATGGAGTGCGATTTGC CGTCTCGCTGGGTATATAACCCCCCTCCCCTACTATTCGAACCCATCGAA CACAGGGAGGCGCTGTTGCGATTGATGACGGAATTCGTGAACGACGTCAA GTCCGGTCAGCACGCTGCGAAGGGTTGGCCCAACACCTGCTACGGCATGA GCAAGCTGGGAATCATCGCCTACACCAACGTGAGTCAATGCCCGACGGGA AGATCGTCGTCGTTAGAAGGCGTTTCTTTCGATCTCGGGTCTGGGAGAAT AGGAAACGACACCACGCTGGTAATAGCATCGCAAGCGACGCTTCAGCAGA AACCACGAAACCCACCGGAAATGTTTTTTTACGTTACCTTATCCCTTCGC TTATTTCTTGGAATTCGGGTGCGACGGGACACCGGCGTTACCCGATAGGT GGCTGCGAGGATAGAGGCTGGCTCGAGGGTGTTGGTCAACTCGTGCTGCC CAGGTGAGCGCCGGAGTTGTCGACGGCCGCAGAAGCCTCGCTTTCTTGAG GTTCGGGTGTTCAGAAAACAGCAACCTACTCCTAAGCTCGAAATCTTAGA GCGTCCCCTTGAACGAAGGTGCTTTATTTTGTGCGTCGTAAGGGAAGTAG TTTATTCGTGTGTCTAGCCATGTACCTAGGCGATCGTGTGTCCTTCGAAA AAAGCTTGAATATAACTGTTAATCGTTTGGCCGGTGACGTATGTAACTAG GCAATCCATACGCCGACGGTAGCCAAGGAGAAAAGGTCTGTGACTCTGTC AGGGTTCCCAACCGAGTCAAGTCAAACACCTTGGGAACGCGGAGGTGGAC TGGCAGTGACGCTATGGATGCATACAAGCGTTCTTCAACCCGCGCGAAAA ACAAGAGCGCACACTCGCTTCGCCGCCTTTATCGCGTGCTTCTCGAAGTA AACTTTGCTTCCGCGCTCTGCGTTGTCTGCCGCCGAGAAACAGGTTACTG CGACACGGATATGACGTCGCACCGGGGCCACCTGACTCCAGAAGAGGGTG CACGCACGCCGTTCATGCTCACTCAGATGAAGGACCTTACAGACGGGGGA GTAACGGGAGGTTTCTTCCAGAGAGGAGCGTTGTCGCGGTGGTAGGAAGT CTCGCAGGATCAGAGAGAGAGAGACCTGCTGAGATATACGGCATGGCGTT GAGTGGGTGCAGCAGAGACATCTTTCTGGAAAGTTGGCAAAGCCATGTGC AAAGCCTCTAGAGGTCGTTCGTTCCCAGGGCAGCTTGTGTGTGCCAATTC ACGGTTTGTTCGAACTTCGAGGTACGGGCGATCGATGCCATGGTGTTGAC CATGTCACGAGAGAATTTGTACTTTCTAAGCTTGTTTGTTTTTCCTCTCC TGAAGCCTGCCGATGGGTCTTGACCCTCGCAGGCTTCGTAGAGTTGTGCG CCCGTGGGGGAATGCCGACGGTCGAAAGGCGGGGGAAATAGGGGTAGCTT GCTTTTGCGCCGGATTCGAGAGAACGGGATGAGTAGACGCGATATCTCCT CGCGCACACAACACAACGCAGACATTTTTGGTGTTTTATGCCACAGAGAT CTATCATCGAGGCAGAGTTGCATCTGAGCTCTTGCAGCCCAGCATATGCA ATCCGGAGCAAAACTCTTATAATGCAAACACAAATTCGAGGTCTTTCCTC AAAACGTGTCGAGCAAGTCCCTGGTGTAAATCCTTCTCACCACAGACGCC CCCGCGCTAGGCCGAGTATTTGAGGGGTGTGATGACCCACACGAGTGTGT GTTTCACACGGATGGACGGCAACGGCAGCCACAACACCCAGGAATTGCGC TTGTCATATCTGATCGCGGCCGGACGGGCGCAATGGAGGCAACCCAAGGT TTTCTGGAGACACAAAAGGG
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Coding sequence (CDS) from alignment at H-elongata_contig14121:125..5094+

>mRNA_H-elongata_contig14121.2855.1 ID=mRNA_H-elongata_contig14121.2855.1|Name=mRNA_H-elongata_contig14121.2855.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2388bp|location=Sequence derived from alignment at H-elongata_contig14121:125..5094+ (Himanthalia elongata Himel1 dioecious)
ATGCTCTCTGGGGGATTCCCCAAAAAACTGATGCCTACCTCCACGCAGTC
TTTTCACTTCTCCACGCTTTTCAGGCTTCTGCTTCAGATAAAATTATTGA
TTATTTGCCTGATCGATCCAGTGGAGGCAATGCTCTCGAAAGTGGCAGTC
GTCACGGGAGCGAACAAAGATGCTCTCTGGGGGATTCCCCAAAAAACTGA
TGCCTACCTCCACGCAGTCTTTTCACTTCTCCACGCTTTTCAGGCTTCTG
CTTCAGATAAAATTATTGATTATTTGCCTGATCGATCCAGTGGAGGCAAT
GCTCTCGAAAGTGGCAGTCGTCACGGGAGCGAACAAAGGGATCGGGCTCG
CGATCGCAAAGAAACTAGCGCAGACCCCAGAGCACATCTGCGTCCTGACC
TCGCGTGATCGTGCGCGGGGAGAGAAGGCGGTCGACAACCTCAAGAATGA
AGGCATCACGGTGGTGTTCAAGCAGCTTGATATCGGAGATACGGCATCCG
TCGAGGGATCGGGCTCGCGATCGCAAAGAAACTAGCGCAGACCCCAGAGC
ACATCTGCGTCCTGACCTCGCGTGATCGTGCGCGGGGAGAGAAGGCGGTC
GACAACCTCAAGAATGAAGGCATCACGGTGGTGTTCAAGCAGCTTGATAT
CGGAGATACGGCATCCGTCGAGCGCTTCGCGTCTGAGATGGAGGAGGAGT
ACGGTCGTTGCGACGTGCTCGTCAACAACGCCGCCATCGCCTTCAAAGGT
AGCGACCCCACGCCTTTCAGCGCTTCGCGTCTGAGATGGAGGAGGAGTAC
GGTCGTTGCGACGTGCTCGTCAACAACGCCGCCATCGCCTTCAAAGGTAG
CGACCCCACGCCTTTCAGGGACCAAGTGGAACCCACCTTGAAGACCAACT
TCTTCGACACCGTCGCCTTCACGGAGAGAATGCTACCGCTCGTGAGAAAG
GACCAAGTGGAACCCACCTTGAAGACCAACTTCTTCGACACCGTCGCCTT
CACGGAGAGAATGCTACCGCTCGTGAGAAAGAGTCCGGCTGGTCGAGTTG
TCAACATGGCAAGCATGAGCGGTCAGCTATCGATCCTGAAGAGCGGCGAC
ATGCGCGACGCCTTTACAAGTCCCGTCCTGACAAAGAGTCCGGCTGGTCG
AGTTGTCAACATGGCAAGCATGAGCGGTCAGCTATCGATCCTGAAGAGCG
GCGACATGCGCGACGCCTTTACAAGTCCCGTCCTGACAAAGGAGGCGCTG
TTGCGATTGATGACGGAATTCGTGAACGACGTCAAGTCCGGTCAGCACGC
TGCGAAGGGTTGGCCCAACACCTGCTACGGCATGAGCAAGCTGGGAATCA
TCGCCTACACCAACGGAGGCGCTGTTGCGATTGATGACGGAATTCGTGAA
CGACGTCAAGTCCGGTCAGCACGCTGCGAAGGGTTGGCCCAACACCTGCT
ACGGCATGAGCAAGCTGGGAATCATCGCCTACACCAACGTGGCTGCGAGG
ATAGAGGCTGGCTCGAGGGTGTTGGTCAACTCGTGCTGCCCAGGTGGCTG
CGAGGATAGAGGCTGGCTCGAGGGTGTTGGTCAACTCGTGCTGCCCAGGC
AATCCATACGCCGACGGTAGCCAAGGAGAAAAGGTCTGTGACTCTGTCAG
GGTTCCCAACCGAGTCAAGTCAAACACCTTGGGAACGCGGAGGTGGACTG
GCAGTGACGCTATGGATGCATACAAGCGTTCTTCAACCCGCGCGAAAAAC
AAGAGCGCACACTCGCTTCGCCGCCTTTATCGCGTGCTTCTCGAAGTAAA
CTTTGCTTCCGCGCTCTGCGTTGTCTGCCGCCGAGAAACAGGTTACTGCG
ACACGGATATGACGTCGCACCGGGGCCACCTGACTCCAGAAGAGGGTGCA
CGCACGCCGTTCATGCTCACTCAGATGAAGGACCTTACAGACGGGGGAGT
AACGGGAGGTTTCTTCCAGAGAGGAGCGTTGTCGCGGTGGTAGGCAATCC
ATACGCCGACGGTAGCCAAGGAGAAAAGGTCTGTGACTCTGTCAGGGTTC
CCAACCGAGTCAAGTCAAACACCTTGGGAACGCGGAGGTGGACTGGCAGT
GACGCTATGGATGCATACAAGCGTTCTTCAACCCGCGCGAAAAACAAGAG
CGCACACTCGCTTCGCCGCCTTTATCGCGTGCTTCTCGAAGTAAACTTTG
CTTCCGCGCTCTGCGTTGTCTGCCGCCGAGAAACAGGTTACTGCGACACG
GATATGACGTCGCACCGGGGCCACCTGACTCCAGAAGAGGGTGCACGCAC
GCCGTTCATGCTCACTCAGATGAAGGACCTTACAGACGGGGGAGTAACGG
GAGGTTTCTTCCAGAGAGGAGCGTTGTCGCGGTGGTAG
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