prot_H-elongata_contig141118.2848.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig141118.2848.1
Unique Nameprot_H-elongata_contig141118.2848.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length67
Homology
BLAST of mRNA_H-elongata_contig141118.2848.1 vs. uniprot
Match: A0A6H5KPF3_9PHAE (GH16 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KPF3_9PHAE)

HSP 1 Score: 132 bits (331), Expect = 1.960e-34
Identity = 57/66 (86.36%), Postives = 62/66 (93.94%), Query Frame = 0
Query:    1 QGWNKFCFTGGIVEIRARLPGSHDIGGLWPAMWLMGNLARATFTASSDYTWPWSYNKCNRTTEEKA 66
            Q W+KFCFTGGIVEIRA LPG  DIGGLWPAMWLMGNLARAT+TASSD+TWPWSYNKCNRTT+E+A
Sbjct:  170 QSWDKFCFTGGIVEIRAILPGRPDIGGLWPAMWLMGNLARATYTASSDFTWPWSYNKCNRTTDEQA 235          
BLAST of mRNA_H-elongata_contig141118.2848.1 vs. uniprot
Match: A0A835YPV8_9STRA (Beta-1,6-glucan active enzyme, family GH16 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPV8_9STRA)

HSP 1 Score: 118 bits (295), Expect = 1.260e-29
Identity = 49/66 (74.24%), Postives = 58/66 (87.88%), Query Frame = 0
Query:    1 QGWNKFCFTGGIVEIRARLPGSHDIGGLWPAMWLMGNLARATFTASSDYTWPWSYNKCNRTTEEKA 66
            QGWNKFCFTGGIVE+ A LPG   IGGLWPA+WL+GNLARAT+T+SSDYTWPWSY++C+R+  E A
Sbjct:  116 QGWNKFCFTGGIVEVSAALPGEAYIGGLWPAIWLLGNLARATYTSSSDYTWPWSYDRCDRSDAEHA 181          
BLAST of mRNA_H-elongata_contig141118.2848.1 vs. uniprot
Match: A0A835ZJH7_9STRA (Beta-1,6-glucan active enzyme, family GH16 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZJH7_9STRA)

HSP 1 Score: 117 bits (294), Expect = 2.940e-29
Identity = 48/66 (72.73%), Postives = 56/66 (84.85%), Query Frame = 0
Query:    1 QGWNKFCFTGGIVEIRARLPGSHDIGGLWPAMWLMGNLARATFTASSDYTWPWSYNKCNRTTEEKA 66
             GWNKFCF GG+VE+ A LPG   IGGLWPA+WL+GNLARAT+T SSDYTWPWSYN+CNRT+ + A
Sbjct:  132 MGWNKFCFKGGVVEVSAALPGQAYIGGLWPAIWLLGNLARATYTGSSDYTWPWSYNECNRTSAQTA 197          
BLAST of mRNA_H-elongata_contig141118.2848.1 vs. uniprot
Match: A0A7S3XMP4_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XMP4_HETAK)

HSP 1 Score: 114 bits (286), Expect = 1.720e-28
Identity = 47/65 (72.31%), Postives = 55/65 (84.62%), Query Frame = 0
Query:    1 QGWNKFCFTGGIVEIRARLPGSHDIGGLWPAMWLMGNLARATFTASSDYTWPWSYNKCNRTTEEK 65
            QGWNKFCF GGIVEI A LPG  DIGGLWPAMW+MGNLARATFT +SD  WPWS++KC+ T +++
Sbjct:  129 QGWNKFCFVGGIVEISAELPGQSDIGGLWPAMWIMGNLARATFTGTSDNVWPWSFDKCDPTVQQQ 193          
BLAST of mRNA_H-elongata_contig141118.2848.1 vs. uniprot
Match: A0A448Z4I7_9STRA (GH16 domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z4I7_9STRA)

HSP 1 Score: 113 bits (282), Expect = 1.120e-27
Identity = 49/67 (73.13%), Postives = 57/67 (85.07%), Query Frame = 0
Query:    1 QGWNKFCFTGGIVEIRARLPGSHDIGGLWPAMWLMGNLARATFTASSDYTWPWSYNKC---NRTTEE 64
            QGWNKFCFTGGIVE RA+LPGS  IGGLWPA+W++GNLARAT+  SSDY WP+SYNKC   NR ++E
Sbjct:  134 QGWNKFCFTGGIVEFRAKLPGSPRIGGLWPALWMLGNLARATYVGSSDYMWPYSYNKCDASNRLSQE 200          
BLAST of mRNA_H-elongata_contig141118.2848.1 vs. uniprot
Match: A0A7S2UJ77_9STRA (Hypothetical protein (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UJ77_9STRA)

HSP 1 Score: 106 bits (265), Expect = 2.840e-27
Identity = 42/59 (71.19%), Postives = 50/59 (84.75%), Query Frame = 0
Query:    1 QGWNKFCFTGGIVEIRARLPGSHDIGGLWPAMWLMGNLARATFTASSDYTWPWSYNKCN 59
            QGWNKFC TGGIVE RA+LPG    GGLWPA+W++GNLARAT+  SSD+ WP+SYN+CN
Sbjct:  153 QGWNKFCLTGGIVEFRAKLPGDSGTGGLWPALWMLGNLARATYVGSSDFMWPYSYNQCN 211          
BLAST of mRNA_H-elongata_contig141118.2848.1 vs. uniprot
Match: A0A7S3K4P5_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3K4P5_9STRA)

HSP 1 Score: 111 bits (277), Expect = 3.350e-27
Identity = 45/65 (69.23%), Postives = 55/65 (84.62%), Query Frame = 0
Query:    1 QGWNKFCFTGGIVEIRARLPGSHDIGGLWPAMWLMGNLARATFTASSDYTWPWSYNKCNRTTEEK 65
            Q WNKFCFTGGIVEIRARLPG   +GGLWPAMWL+G L+RAT+  S+D+ WPWSYNKC+R  +++
Sbjct:   54 QTWNKFCFTGGIVEIRARLPGKAKVGGLWPAMWLLGALSRATYVGSTDWIWPWSYNKCDRALQKQ 118          
BLAST of mRNA_H-elongata_contig141118.2848.1 vs. uniprot
Match: A0A7S0Y805_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia delicatissima TaxID=44447 RepID=A0A7S0Y805_9STRA)

HSP 1 Score: 110 bits (276), Expect = 7.650e-27
Identity = 45/60 (75.00%), Postives = 53/60 (88.33%), Query Frame = 0
Query:    1 QGWNKFCFTGGIVEIRARLPGSHDIGGLWPAMWLMGNLARATFTASSDYTWPWSYNKCNR 60
            QGWNKFCFTGGIVE  A+LPGS  IGGLWPA+W+MGNLARAT+  SSDY WP+SYN+C++
Sbjct:  145 QGWNKFCFTGGIVEFSAKLPGSPRIGGLWPALWMMGNLARATYVGSSDYMWPYSYNQCDK 204          
BLAST of mRNA_H-elongata_contig141118.2848.1 vs. uniprot
Match: A0A835YN37_9STRA (Beta-1,6-glucan active enzyme, family GH16 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YN37_9STRA)

HSP 1 Score: 109 bits (273), Expect = 1.860e-26
Identity = 43/58 (74.14%), Postives = 51/58 (87.93%), Query Frame = 0
Query:    3 WNKFCFTGGIVEIRARLPGSHDIGGLWPAMWLMGNLARATFTASSDYTWPWSYNKCNR 60
            WNKFCFTGGI+E+RA LPG H+IGGLWPA WL+GNL RAT+ AS++  WPWSYN+CNR
Sbjct:  143 WNKFCFTGGIIEMRAILPGEHNIGGLWPAFWLLGNLGRATYEASTNLVWPWSYNRCNR 200          
BLAST of mRNA_H-elongata_contig141118.2848.1 vs. uniprot
Match: A0A8J2SVF6_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SVF6_9STRA)

HSP 1 Score: 109 bits (273), Expect = 1.900e-26
Identity = 43/65 (66.15%), Postives = 56/65 (86.15%), Query Frame = 0
Query:    1 QGWNKFCFTGGIVEIRARLPGSHDIGGLWPAMWLMGNLARATFTASSDYTWPWSYNKCNRTTEEK 65
            QGW KFCFTGGI+E+RARLPG+  +GGLWPAMWL+G LARAT+  S+D+ WPWS++KC+R+ + K
Sbjct:  176 QGWGKFCFTGGIMEVRARLPGAGHVGGLWPAMWLLGALARATYVGSTDWMWPWSFDKCDRSLQPK 240          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig141118.2848.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KPF3_9PHAE1.960e-3486.36GH16 domain-containing protein n=2 Tax=Ectocarpus ... [more]
A0A835YPV8_9STRA1.260e-2974.24Beta-1,6-glucan active enzyme, family GH16 n=1 Tax... [more]
A0A835ZJH7_9STRA2.940e-2972.73Beta-1,6-glucan active enzyme, family GH16 n=1 Tax... [more]
A0A7S3XMP4_HETAK1.720e-2872.31Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A448Z4I7_9STRA1.120e-2773.13GH16 domain-containing protein n=1 Tax=Pseudo-nitz... [more]
A0A7S2UJ77_9STRA2.840e-2771.19Hypothetical protein (Fragment) n=1 Tax=Attheya se... [more]
A0A7S3K4P5_9STRA3.350e-2769.23Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
A0A7S0Y805_9STRA7.650e-2775.00Hypothetical protein n=1 Tax=Pseudo-nitzschia deli... [more]
A0A835YN37_9STRA1.860e-2674.14Beta-1,6-glucan active enzyme, family GH16 n=1 Tax... [more]
A0A8J2SVF6_9STRA1.900e-2666.15Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005629Beta-glucan synthesis-associated, Skn1PFAMPF03935SKN1coord: 1..60
e-value: 2.7E-25
score: 88.8
IPR005629Beta-glucan synthesis-associated, Skn1PANTHERPTHR31361FAMILY NOT NAMEDcoord: 1..61
NoneNo IPR availableGENE3D2.60.120.200coord: 1..57
e-value: 2.4E-10
score: 42.5
NoneNo IPR availablePANTHERPTHR31361:SF15coord: 1..61
IPR013320Concanavalin A-like lectin/glucanase domain superfamilySUPERFAMILY49899Concanavalin A-like lectins/glucanasescoord: 5..38

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig141118contigH-elongata_contig141118:760..960 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig141118.2848.1mRNA_H-elongata_contig141118.2848.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig141118 760..960 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig141118.2848.1 ID=prot_H-elongata_contig141118.2848.1|Name=mRNA_H-elongata_contig141118.2848.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=67bp
QGWNKFCFTGGIVEIRARLPGSHDIGGLWPAMWLMGNLARATFTASSDYT
WPWSYNKCNRTTEEKA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005629Skn1
IPR013320ConA-like_dom_sf