mRNA_H-elongata_contig140984.2841.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig140984.2841.1 vs. uniprot
Match: D8LSR3_ECTSI (Amine oxidase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSR3_ECTSI) HSP 1 Score: 413 bits (1061), Expect = 2.630e-138 Identity = 197/256 (76.95%), Postives = 219/256 (85.55%), Query Frame = 1
Query: 1 YLFYWYLMQDGRIEFEIKLSGELSTNLVSEGESDKTPDHGVIVAPGVNAQIHQHNFCARLDMSVDGHKNAVKEVDVVALPQGPENPAGNAFRARYTSLLSELQARRDAAPHAARSWVVLNNHSINPVSGRPVAYKLLPQTRGPAHPTLMTGVQSAVTSRGEFATKALWVTQQSDSERWPAGDYTVQSLGGVETGGLPVWTSQDRSVIDEDIVLWHSFGLVHVPRMEDFPVMPCESTGFTLKPDGFFSGNPNIDLPP 768
YLFYWYLMQDG IEFEIKLSGELSTNL+SEGE TP HGVIVAPGVNAQ+HQH FCARLDMSVDGHKN VKE DVV +P+G +NPAGNAFRA+YT L++E QA+R+A P AARSW++ N SINP++G+PVAYKL+PQT GP HP LMTG SAVT+RGEFATKALWVT D ERWPAGD+TVQS GG GLP WT DR+V DED+VLWHSFGL+HVPR+EDFPVMPCESTGFTLKPDGFFSGNP IDL P
Sbjct: 412 YLFYWYLMQDGSIEFEIKLSGELSTNLLSEGEP--TPQHGVIVAPGVNAQLHQHMFCARLDMSVDGHKNTVKEADVVRVPRGEDNPAGNAFRAQYTPLVTEKQAQREANPRAARSWLIQNPSSINPINGKPVAYKLVPQTFGPTHPLLMTGEDSAVTARGEFATKALWVTPHRDDERWPAGDFTVQSTGGE---GLPAWTKHDRNVEDEDVVLWHSFGLLHVPRVEDFPVMPCESTGFTLKPDGFFSGNPTIDLAP 662
BLAST of mRNA_H-elongata_contig140984.2841.1 vs. uniprot
Match: A0A6H5KQ64_9PHAE (Amine oxidase n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KQ64_9PHAE) HSP 1 Score: 407 bits (1046), Expect = 1.530e-135 Identity = 198/261 (75.86%), Postives = 219/261 (83.91%), Query Frame = 1
Query: 1 YLFYWYLMQDGRIEFEIKLSGELSTNLVSEGESDKTPDHGVIVAPGVNAQIHQ-----HNFCARLDMSVDGHKNAVKEVDVVALPQGPENPAGNAFRARYTSLLSELQARRDAAPHAARSWVVLNNHSINPVSGRPVAYKLLPQTRGPAHPTLMTGVQSAVTSRGEFATKALWVTQQSDSERWPAGDYTVQSLGGVETGGLPVWTSQDRSVIDEDIVLWHSFGLVHVPRMEDFPVMPCESTGFTLKPDGFFSGNPNIDLPP 768
YLFYWYLMQDGRIEFEIKLSGELSTNL+SEGES TP HGVIVAPGVNAQ+HQ H FCARLDMSVDG KN VKE DVV +P G +NPA NAFRA+YT L++E QA+R+A P AARSW++ N SINP++G+PVAYKL+PQT GP HP LMTG SAVT+RGEFATKALWVT D ERWPAGD+TVQS GG GLP WT DR+V DED+VLWHSFGL+HVPR+EDFPVMPCESTGFTLKPDGFFSGNP IDLPP
Sbjct: 449 YLFYWYLMQDGRIEFEIKLSGELSTNLLSEGES--TPQHGVIVAPGVNAQLHQAWMTPHMFCARLDMSVDGQKNTVKEADVVRVPCGEDNPASNAFRAQYTPLVTEKQAQREANPRAARSWLIQNPSSINPINGKPVAYKLVPQTFGPTHPLLMTGEDSAVTARGEFATKALWVTPHRDDERWPAGDFTVQSTGGE---GLPAWTKHDRNVEDEDVVLWHSFGLLHVPRVEDFPVMPCESTGFTLKPDGFFSGNPTIDLPP 704
BLAST of mRNA_H-elongata_contig140984.2841.1 vs. uniprot
Match: A0A830HQ12_9CHLO (Amine oxidase n=2 Tax=Pycnococcus provasolii TaxID=41880 RepID=A0A830HQ12_9CHLO) HSP 1 Score: 330 bits (847), Expect = 1.140e-105 Identity = 162/256 (63.28%), Postives = 193/256 (75.39%), Query Frame = 1
Query: 1 YLFYWYLMQDGRIEFEIKLSGELSTNLVSEGESDKTPDHGVIVAPGVNAQIHQHNFCARLDMSVDGHKNAVKEVDVVALPQGPENPAGNAFRARYTSLLSELQARRDAAPHAARSWVVLNNHSINPVSGRPVAYKLLPQTRGPAHPTLMTGVQSAVTSRGEFATKALWVTQQSDSERWPAGDYTVQSLGGVETGGLPVWTSQDRSVIDEDIVLWHSFGLVHVPRMEDFPVMPCESTGFTLKPDGFFSGNPNIDLPP 768
YLFYW L QDG IEF+IKLSGELSTNL+SEGE + P +GV+VAPGVNAQ+HQH FCARLDM VDG N+V EVDV LP NP GNAF+A+ T L +E A+R +A R+W + N IN +SG PV YKL+P T G A PTLMT AV +RGEFATK LWVT SD ER+PAG++T QS G + GLP WTS++RSV + D+V WH+FG++HVPR EDFPVMPCE+TGF LKPD FF+GNP+IDLPP
Sbjct: 458 YLFYWTLHQDGSIEFQIKLSGELSTNLLSEGE--EAPAYGVMVAPGVNAQVHQHMFCARLDMDVDGSANSVAEVDVETLPVDASNPHGNAFKAKKTVLKTESDAKRTYDSNACRTWKIFNPSKINEISGEPVGYKLVPFTSGAAQPTLMTSPSCAVNTRGEFATKNLWVTSHSDDERYPAGEWTPQSTGAL---GLPEWTSKNRSVENTDVVCWHAFGVMHVPRPEDFPVMPCETTGFMLKPDNFFTGNPSIDLPP 708
BLAST of mRNA_H-elongata_contig140984.2841.1 vs. uniprot
Match: A0A7S1DXA7_HEMAN (Amine oxidase n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1DXA7_HEMAN) HSP 1 Score: 311 bits (798), Expect = 3.420e-103 Identity = 148/256 (57.81%), Postives = 180/256 (70.31%), Query Frame = 1
Query: 1 YLFYWYLMQDGRIEFEIKLSGELSTNLVSEGESDKTPDHGVIVAPGVNAQIHQHNFCARLDMSVDGHKNAVKEVDVVALPQGPENPAGNAFRARYTSLLSELQARRDAAPHAARSWVVLNNHSINPVSGRPVAYKLLPQTRGPAHPTLMTGVQSAVTSRGEFATKALWVTQQSDSERWPAGDYTVQSLGGVETGGLPVWTSQDRSVIDEDIVLWHSFGLVHVPRMEDFPVMPCESTGFTLKPDGFFSGNPNIDLPP 768
YLFYW QDG I++EIKLSGELSTNL+S GE P HGVIVAPGVN+Q HQH FC RLD+ V G N V E+D++ P P NP GN F+ + T+L +E + R P AR W + N +N +SG+PVAYKL+P TRGPA P L+ AV +G FATK LWVT S SER+PAG++T Q G + GLP WT+QDR + +D+VLWH FG+ H+PR+EDFPVMPCE TGFTLKPDGF GNP ID+PP
Sbjct: 66 YLFYWRFKQDGTIDYEIKLSGELSTNLMSAGED--VPSHGVIVAPGVNSQYHQHMFCTRLDVEVAGASNTVSEIDIITEPMSPSNPYGNCFKPQETTLRTEKEGIRTGDPMKARHWKISNPSILNSISGKPVAYKLIPFTRGPAQPPLLVSPDCAVAKKGMFATKHLWVTPYSPSERYPAGEFTPQGDG---SNGLPAWTAQDRQLDGQDVVLWHCFGVAHIPRVEDFPVMPCEVTGFTLKPDGFSLGNPGIDIPP 316
BLAST of mRNA_H-elongata_contig140984.2841.1 vs. uniprot
Match: A0A7S1GM92_CYCTE (Amine oxidase n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1GM92_CYCTE) HSP 1 Score: 309 bits (791), Expect = 3.240e-102 Identity = 156/259 (60.23%), Postives = 187/259 (72.20%), Query Frame = 1
Query: 1 YLFYWYLMQDGRIEFEIKLSGELSTNLVSEGESDKTPDHGVIVAPGVNAQIHQHNFCARLDMSVDGHKNAVKEVDVVALP-QGPENPAGNAFRARYTSLLSELQARRDAAPHAARSWVVLNNHS-INPVSGRPVAYKLLPQTRGPAHPTLMTGVQS-AVTSRGEFATKALWVTQQSDSERWPAGDYTVQSLGGVETGGLPVWTSQDRSVIDEDIVLWHSFGLVHVPRMEDFPVMPCESTGFTLKPDGFFSGNPNIDLPP 768
YLFYW L DG I+FEI+LSGELSTNL S GE P+ G +VAPGVNAQ+HQH FCARLDM VDG KN V EVDVV +P NP GNAF A T L +E +A R + ARSW + N +N +SG+PVAYKL+P TRGPA P L+T + AV+ +G FA LWVT Q+D+ER+PAG+YT Q+L E GLP W +R++ ED+VLWHSFG+ HVPR+EDFPVMPCE+TGFTLKPDGF GNP ID+PP
Sbjct: 52 YLFYWRLKLDGTIDFEIRLSGELSTNLPSAGEDPTNPEWGTLVAPGVNAQVHQHMFCARLDMEVDGTKNTVSEVDVVPMPYDAVHNPYGNAFGASETVLTTEQEAVRTYDANKARSWKISNAEGKVNSISGKPVAYKLIPFTRGPAQPPLITHPEECAVSHKGAFAKAHLWVTPQTDTERYPAGEYTPQAL---EPDGLPKWIQSNRNIEGEDVVLWHSFGVTHVPRVEDFPVMPCETTGFTLKPDGFSMGNPAIDMPP 307
BLAST of mRNA_H-elongata_contig140984.2841.1 vs. uniprot
Match: A0A2V3J6I3_9FLOR (Amine oxidase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J6I3_9FLOR) HSP 1 Score: 319 bits (818), Expect = 8.000e-102 Identity = 159/255 (62.35%), Postives = 190/255 (74.51%), Query Frame = 1
Query: 1 YLFYWYLMQDGRIEFEIKLSGELSTNLVSEGESDKTPDHGVIVAPGVNAQIHQHNFCARLDMSVDGHKNAVKEVDVVALPQGPENPAGNAFRARYTSLLSELQARRDAAPHAARSWVVLNNHSINPVSGRPVAYKLLPQTRGPAHPTLMTGVQSAVTSRGEFATKALWVTQQSDSERWPAGDYTVQSLGGVETGGLPVWTSQDRSVIDEDIVLWHSFGLVHVPRMEDFPVMPCESTGFTLKPDGFFSGNPNIDLP 765
YLFYWYL DG I EIKLSGELSTNL+SEGE+ P GVIVAPGVNAQIHQH FCARL+M+VDG +N+V+EV++VA +G NP GN FR T L SE A+RDAA AAR+W + N H N +SG+ VAYKL+P T G P L+T SAV+ RG FA KA+WVT E++PAG++ QSLGG GLP WTSQ+RS++DE IV+WHSFG+ HVPR EDFP+MPCESTGFTLKPD F GNP +D+P
Sbjct: 420 YLFYWYLHHDGSISHEIKLSGELSTNLLSEGETH--PTAGVIVAPGVNAQIHQHMFCARLEMAVDGAQNSVEEVNLVAAEEGSHNPFGNIFRVESTLLRSEQDAQRDAA--AARTWRIFNPHKSNTISGKKVAYKLVPYTFGAFQPPLLTTDDSAVSKRGRFAKKAIWVTPYRKDEQFPAGEFPTQSLGG---DGLPSWTSQNRSIVDERIVIWHSFGVAHVPRTEDFPIMPCESTGFTLKPDCFLMGNPGVDIP 667
BLAST of mRNA_H-elongata_contig140984.2841.1 vs. uniprot
Match: A0A448ZC22_9STRA (Amine oxidase n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZC22_9STRA) HSP 1 Score: 313 bits (801), Expect = 1.100e-98 Identity = 156/257 (60.70%), Postives = 187/257 (72.76%), Query Frame = 1
Query: 1 YLFYWYLMQDGRIEFEIKLSGELSTNLVSEGESDKTPDHGVIVAPGVNAQIHQHNFCARLDMSVDGHKNAVKEVDVVALPQGPENPAGNAFRARYTSLLSELQARRDAAPHAARSWVVLNNHS-INPVSGRPVAYKLLPQTRGPAHPTLMTGVQSAVTSRGEFATKALWVTQQSDSERWPAGDYTVQSLGGVETGGLPVWTSQDRSVIDEDIVLWHSFGLVHVPRMEDFPVMPCESTGFTLKPDGFFSGNPNIDLPP 768
YLFYW+L QDG I+F+IKLSGELSTNL+S+GES P HGV+VAP VNAQIHQH FCARLDMSVD HKN++ EVD+ + P NP GN F + T L E A+R + ARSW + N N ++G+PVAYKLLP + GP+ P L+T AVT +GEFATK LWVT SD ER+PAG+ TV G + GLP WT +R++ ED+VLWH+FG+ HVPR EDFPVMPCE+TGFTLKPDGFF GNP IDL P
Sbjct: 469 YLFYWHLRQDGCIDFKIKLSGELSTNLLSDGES--VPSHGVMVAPNVNAQIHQHMFCARLDMSVDSHKNSISEVDMYSEPFSDTNPYGNCFNVKETILEDEESAKRVYDANKARSWKIFNAEGKTNGMTGKPVAYKLLPFSMGPSQPILLTDPSCAVTKKGEFATKHLWVTPHSDKERYPAGECTVLGDG---SDGLPDWTKANRNLQGEDLVLWHAFGVAHVPRTEDFPVMPCETTGFTLKPDGFFDGNPGIDLEP 720
BLAST of mRNA_H-elongata_contig140984.2841.1 vs. uniprot
Match: K8EHE4_9CHLO (Amine oxidase n=1 Tax=Bathycoccus prasinos TaxID=41875 RepID=K8EHE4_9CHLO) HSP 1 Score: 311 bits (796), Expect = 1.850e-98 Identity = 151/257 (58.75%), Postives = 189/257 (73.54%), Query Frame = 1
Query: 1 YLFYWYLMQDGRIEFEIKLSGELSTNLVSEGESDKTPDHGVIVAPGVNAQIHQHNFCARLDMSVDGHKNAVKEVDVVALPQGPENPAGNAFRARYTSLLSELQARRDAAPHAARSWVVLNNHSINPVSGRPVAYKLLPQTRGPAHPTLMTGVQSAVTSRGEFATKALWVTQQS-DSERWPAGDYTVQSLGGVETGGLPVWTSQDRSVIDEDIVLWHSFGLVHVPRMEDFPVMPCESTGFTLKPDGFFSGNPNIDLPP 768
YLFY+Y QDG IEFEIKL+GELSTN +S GES+ P HGV+VAPGVN+QIHQH FCARLD+++DG++N V E+D+ + N F T L++ELQARR AR W + N S+NPV+ +PV+YKL+P TRGPA PTL+TG + AVT +GEFATK LWVT + +ERWPAG++TVQ G GLP WT DR + ++V+WH+FG+VH+PR EDFPVMP E TGF+LKPDGFF+GNP IDLPP
Sbjct: 422 YLFYYYFQQDGTIEFEIKLTGELSTNAISAGESNDDPTHGVLVAPGVNSQIHQHMFCARLDVAIDGNENEVSEIDICS--DTSTGSCQNVFGPVTTPLVTELQARRVCDSTKARVWKISNPSSLNPVTKKPVSYKLIPFTRGPAMPTLLTGPECAVTKKGEFATKNLWVTPYNWPNERWPAGEFTVQGALGE---GLPEWTKDDRDISSGELVIWHAFGVVHIPRPEDFPVMPVEHTGFSLKPDGFFAGNPTIDLPP 673
BLAST of mRNA_H-elongata_contig140984.2841.1 vs. uniprot
Match: A0A1Z5JVD1_FISSO (Amine oxidase n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JVD1_FISSO) HSP 1 Score: 300 bits (769), Expect = 1.100e-94 Identity = 155/260 (59.62%), Postives = 188/260 (72.31%), Query Frame = 1
Query: 1 YLFYWYLMQDGRIEFEIKLSGELSTNLVSEGESDKTPDHGVIVAPGVNAQIHQHNFCARLDMSVDGHK-NAVKEVDVVALPQGP-ENPAGNAFRARYTSLLSELQARRDAAPHAARSWVVLNNHSINPVSGRPVAYKLLPQTRGPAHPTLMTGVQSAVTSRGEFATKALWVTQQSDSERWPAGDYTVQSLGGVETGGLPVWTSQDRSVID--EDIVLWHSFGLVHVPRMEDFPVMPCESTGFTLKPDGFFSGNPNIDLPP 768
YLFYW L QDG I+FEIKLSGELSTNL+S ESD P HGV+VAPGVN+QIHQH FCARLDM+VDG + N V+EVD+V+ P P NP GN F T L +E A R AR+W + +N + NP++G+ +YKL+P ++G A P LMT SAV +G FAT LWVT ER+PAG+YT Q G V GLP WTSQDRS++D E IV+WH+FG++HVPR+EDFPVMPCE TGF+LKPD FF GNP ID+PP
Sbjct: 389 YLFYWRLKQDGMIDFEIKLSGELSTNLLSAPESDGRPTHGVLVAPGVNSQIHQHMFCARLDMAVDGAEHNTVREVDIVSRPVDPVSNPYGNVFEPVETLLTTEQAAIRTLDVTKARTWKISSNKT-NPINGKLTSYKLVPFSKGAAQPVLMTDPSSAVFKKGTFATSHLWVTPYHPKERFPAGEYTPQGDGSV---GLPQWTSQDRSLLDCPEGIVVWHAFGVLHVPRIEDFPVMPCEITGFSLKPDNFFLGNPGIDIPP 644
BLAST of mRNA_H-elongata_contig140984.2841.1 vs. uniprot
Match: A0A7S2XTZ3_9STRA (Amine oxidase n=2 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XTZ3_9STRA) HSP 1 Score: 293 bits (751), Expect = 4.200e-91 Identity = 155/259 (59.85%), Postives = 187/259 (72.20%), Query Frame = 1
Query: 1 YLFYWYLMQDGRIEFEIKLSGELSTNLVSEGESDKT--PDHGVIVAPGVNAQIHQHNFCARLDMSVDGHKNAVKEVDVVALPQGPENPAGNAFRARYTSLLSELQARRDAAPHAARSWVVLNNHS-INPVSGRPVAYKLLPQTRGPAHPTLMTGVQSAVTSRGEFATKALWVTQQSDSERWPAGDYTVQSLGGVETGGLPVWTSQDRSVIDEDIVLWHSFGLVHVPRMEDFPVMPCESTGFTLKPDGFFSGNPNIDLPP 768
YLFYW L QDG I+FEIKLSGELSTNL+S E +KT +G IVA GVNAQIHQH FCARLDM+VDG N V EVDVVA NP GNAF T+L +E A R ARSW + N NPV+ +PVAYKL+P +RG +HPTL+T +SAV+ +G FA L+VT SD+ER+PAG+YT Q G + GLP W + +RS+ +D+VLWHSFG+ H+PR+EDFPVMPCE+TGF LKPDGFF+GNP IDLPP
Sbjct: 481 YLFYWRLKQDGTIDFEIKLSGELSTNLLS-AEEEKTGKSTYGTIVARGVNAQIHQHMFCARLDMAVDGDINTVSEVDVVA-SGSHNNPYGNAFGPVETTLTTESGASRTYDATKARSWKISNAEGKTNPVNDKPVAYKLIPFSRGGSHPTLLTSPESAVSKKGAFANYHLFVTPHSDTERFPAGEYTPQGNG---SNGLPDWMAANRSIESKDVVLWHSFGVTHMPRVEDFPVMPCETTGFMLKPDGFFAGNPAIDLPP 734 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig140984.2841.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig140984.2841.1 >prot_H-elongata_contig140984.2841.1 ID=prot_H-elongata_contig140984.2841.1|Name=mRNA_H-elongata_contig140984.2841.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=249bp MQDGRIEFEIKLSGELSTNLVSEGESDKTPDHGVIVAPGVNAQIHQHNFCback to top mRNA from alignment at H-elongata_contig140984:279..1458+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig140984.2841.1 ID=mRNA_H-elongata_contig140984.2841.1|Name=mRNA_H-elongata_contig140984.2841.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1180bp|location=Sequence derived from alignment at H-elongata_contig140984:279..1458+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig140984:279..1458+ >mRNA_H-elongata_contig140984.2841.1 ID=mRNA_H-elongata_contig140984.2841.1|Name=mRNA_H-elongata_contig140984.2841.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1494bp|location=Sequence derived from alignment at H-elongata_contig140984:279..1458+ (Himanthalia elongata Himel1 dioecious)back to top |