prot_H-elongata_contig140835.2828.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig140835.2828.1
Unique Name	prot_H-elongata_contig140835.2828.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	106

Homology

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BLAST of mRNA_H-elongata_contig140835.2828.1 vs. uniprot
Match: A0A6H5KRB1_9PHAE (Tr-type G domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KRB1_9PHAE)

HSP 1 Score: 150 bits (378), Expect = 6.560e-40
Identity = 78/97 (80.41%), Postives = 85/97 (87.63%), Query Frame = 0

Query:   10 QSRERGITLDLGFSAFTMEASECFPNNEFTHVQFTLVDCPGHASLIRTIIGGAQIMDMMLLVVDATKGMQTQTTECVVIAEAVMTQGVDVIVVLNKV 106
            QSRERGITLDLGFSAFT+   E  P ++++H+QFTLVDCPGHASLIRTIIGGAQIMDMMLLVVDATKGMQ QT ECVVI EAVM+ G  VIVVLNKV
Sbjct:   46 QSRERGITLDLGFSAFTVPLPEHLPQDQYSHLQFTLVDCPGHASLIRTIIGGAQIMDMMLLVVDATKGMQAQTMECVVIGEAVMSSGAAVIVVLNKV 142

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BLAST of mRNA_H-elongata_contig140835.2828.1 vs. uniprot
Match: A0A820ME81_9BILA (Hypothetical protein (Fragment) n=1 Tax=Adineta steineri TaxID=433720 RepID=A0A820ME81_9BILA)

HSP 1 Score: 122 bits (305), Expect = 1.430e-33
Identity = 65/97 (67.01%), Postives = 80/97 (82.47%), Query Frame = 0

Query:   10 QSRERGITLDLGFSAFTMEASECFPNNEFTHVQFTLVDCPGHASLIRTIIGGAQIMDMMLLVVDATKGMQTQTTECVVIAEAVMTQGVDVIVVLNKV 106
            QS+ERGITLDLGFS+FTM+  E   N+ +  +Q TLVDCPGHASLIRTIIGGAQI+D+MLLVVD TKGMQTQT EC++I E  +T  + ++VVLNK+
Sbjct:   26 QSQERGITLDLGFSSFTMDIPEHLSNSNYKQLQITLVDCPGHASLIRTIIGGAQIIDLMLLVVDITKGMQTQTAECLIIGE--ITCDI-MLVVLNKI 119

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BLAST of mRNA_H-elongata_contig140835.2828.1 vs. uniprot
Match: A0A835ZB77_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZB77_9STRA)

HSP 1 Score: 131 bits (330), Expect = 1.470e-33
Identity = 72/98 (73.47%), Postives = 77/98 (78.57%), Query Frame = 0

Query:    8 HTQSRERGITLDLGFSAFTMEASECFPNNEFTHVQFTLVDCPGHASLIRTIIGGAQIMDMMLLVVDATKGMQTQTTECVVIAEAVMTQGVDVIVVLNK 105
            H QSRERGITLDLGFSAFT+ A           VQFTLVDCPGHASLIRTIIGGAQI+DMMLLVVDATKGMQTQT ECVVI E  M    D+++VLNK
Sbjct:   61 HPQSRERGITLDLGFSAFTVPAPAAVAAL-CDSVQFTLVDCPGHASLIRTIIGGAQIIDMMLLVVDATKGMQTQTAECVVIGETTMASADDLVIVLNK 157

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BLAST of mRNA_H-elongata_contig140835.2828.1 vs. uniprot
Match: A0A7S4D6B4_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D6B4_HETAK)

HSP 1 Score: 119 bits (299), Expect = 1.040e-32
Identity = 60/88 (68.18%), Postives = 73/88 (82.95%), Query Frame = 0

Query:    8 HTQSRERGITLDLGFSAFTMEA-----SECFPNNEFTHVQFTLVDCPGHASLIRTIIGGAQIMDMMLLVVDATKGMQTQTTECVVIAE 90
            H QS++RGITLDLGFSAF +E      S+   ++E+TH+QFTLVDCPGHASLIRTIIGGAQI+D+M+LVVDA KGMQ QT EC+V+ E
Sbjct:   41 HPQSQQRGITLDLGFSAFVLEMPDHLKSQMATDDEYTHLQFTLVDCPGHASLIRTIIGGAQIIDLMVLVVDAVKGMQMQTGECLVVGE 128

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BLAST of mRNA_H-elongata_contig140835.2828.1 vs. uniprot
Match: A0A2R5G8P6_9STRA (Selenocysteine-specific elongation factor n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G8P6_9STRA)

HSP 1 Score: 127 bits (319), Expect = 3.650e-32
Identity = 69/99 (69.70%), Postives = 81/99 (81.82%), Query Frame = 0

Query:    8 HTQSRERGITLDLGFSAFTMEASECFPNNEFTHVQFTLVDCPGHASLIRTIIGGAQIMDMMLLVVDATKGMQTQTTECVVIAEAVMTQGVDVIVVLNKV 106
            H QS+ERGITLDLGFSAFT+EA E   +     VQ+TLVDCPGHASLIRTIIGGAQI+D M+LVVD TKG+QTQT EC+VI E ++T   D+IVVLNK+
Sbjct:   41 HPQSKERGITLDLGFSAFTVEAPEQLADTGVKQVQYTLVDCPGHASLIRTIIGGAQIIDRMILVVDVTKGIQTQTAECLVIGE-ILTD--DLIVVLNKI 136

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BLAST of mRNA_H-elongata_contig140835.2828.1 vs. uniprot
Match: A0A2P6TQ88_CHLSO (Selenocysteine-specific elongation factor n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6TQ88_CHLSO)

HSP 1 Score: 127 bits (320), Expect = 3.680e-32
Identity = 67/99 (67.68%), Postives = 78/99 (78.79%), Query Frame = 0

Query:    8 HTQSRERGITLDLGFSAFTMEASECFPNNEFTHVQFTLVDCPGHASLIRTIIGGAQIMDMMLLVVDATKGMQTQTTECVVIAEAVMTQGVDVIVVLNKV 106
            H QS+ERGITLDLGFS+FT+ A        +THVQFTLVDCPGHASLIRTIIGGAQI+DMM+LVVDA KG+QTQT EC+VI E       D++V LNK+
Sbjct:   62 HPQSKERGITLDLGFSSFTVPAPPHVAAAGYTHVQFTLVDCPGHASLIRTIIGGAQIIDMMVLVVDAGKGIQTQTAECIVIGEVA---AADMVVALNKI 157

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BLAST of mRNA_H-elongata_contig140835.2828.1 vs. uniprot
Match: A0A3M7Q3R4_BRAPC (Selenocysteine-specific elongation factor n=1 Tax=Brachionus plicatilis TaxID=10195 RepID=A0A3M7Q3R4_BRAPC)

HSP 1 Score: 120 bits (300), Expect = 1.290e-31
Identity = 61/96 (63.54%), Postives = 78/96 (81.25%), Query Frame = 0

Query:   10 QSRERGITLDLGFSAFTMEASECFPNNEFTHVQFTLVDCPGHASLIRTIIGGAQIMDMMLLVVDATKGMQTQTTECVVIAEAVMTQGVDVIVVLNK 105
            QS++RGITLDLGFS+FT+ +SE      +  VQ+TLVDCPGHASLIRTIIGGAQI+DMM+LV+D TKG+QTQT EC++I E   +Q   +++VLNK
Sbjct:   39 QSKQRGITLDLGFSSFTIPSSESLKLKGYDFVQYTLVDCPGHASLIRTIIGGAQIIDMMILVIDITKGIQTQTAECLIIGEICCSQ---MLIVLNK 131

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BLAST of mRNA_H-elongata_contig140835.2828.1 vs. uniprot
Match: A0A8J4FTB8_9CHLO (Tr-type G domain-containing protein n=1 Tax=Volvox reticuliferus TaxID=1737510 RepID=A0A8J4FTB8_9CHLO)

HSP 1 Score: 120 bits (300), Expect = 1.320e-31
Identity = 61/99 (61.62%), Postives = 77/99 (77.78%), Query Frame = 0

Query:    8 HTQSRERGITLDLGFSAFTMEASECFPNNEFTHVQFTLVDCPGHASLIRTIIGGAQIMDMMLLVVDATKGMQTQTTECVVIAEAVMTQGVDVIVVLNKV 106
            H QS+ERGITLDLGFSAFT+   E   +  +  +QFTLVDCPGHASLIRTIIGG QI+DMM+LV+D TKG+QTQT EC+V+ E   ++   ++V LNK+
Sbjct:   39 HPQSKERGITLDLGFSAFTLPMPEHMAHLPYDELQFTLVDCPGHASLIRTIIGGIQIIDMMVLVIDITKGLQTQTAECLVVGEVATSR---MVVALNKI 134

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BLAST of mRNA_H-elongata_contig140835.2828.1 vs. uniprot
Match: E1Z5S9_CHLVA (Tr-type G domain-containing protein n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1Z5S9_CHLVA)

HSP 1 Score: 125 bits (314), Expect = 1.530e-31
Identity = 65/99 (65.66%), Postives = 78/99 (78.79%), Query Frame = 0

Query:    8 HTQSRERGITLDLGFSAFTMEASECFPNNEFTHVQFTLVDCPGHASLIRTIIGGAQIMDMMLLVVDATKGMQTQTTECVVIAEAVMTQGVDVIVVLNKV 106
            H QSRERGITLDLGFS+F + A        ++HVQFTLVDCPGHASLIRTIIGGAQI+D+M+LVVDA+KG+QTQT EC+VI E       D++V LNK+
Sbjct:   45 HPQSRERGITLDLGFSSFMVPAPPQIQAAGYSHVQFTLVDCPGHASLIRTIIGGAQIIDLMVLVVDASKGIQTQTAECIVIGEVA---AADMVVALNKI 140

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BLAST of mRNA_H-elongata_contig140835.2828.1 vs. uniprot
Match: UPI00193A73C3 (selenocysteine-specific elongation factor-like n=1 Tax=Styela clava TaxID=7725 RepID=UPI00193A73C3)

HSP 1 Score: 125 bits (314), Expect = 1.720e-31
Identity = 64/97 (65.98%), Postives = 79/97 (81.44%), Query Frame = 0

Query:   10 QSRERGITLDLGFSAFTMEASECFPNNEFTHVQFTLVDCPGHASLIRTIIGGAQIMDMMLLVVDATKGMQTQTTECVVIAEAVMTQGVDVIVVLNKV 106
            QS++RGITLDLGFS+FT+ A +   N   THVQ+TLVDCPGHASLIRTIIGGAQI+D+M+LVVD  KGMQTQT EC+VI E +  +   ++VVLNK+
Sbjct:   40 QSKQRGITLDLGFSSFTVPAPDHIVNESITHVQYTLVDCPGHASLIRTIIGGAQIIDLMILVVDVVKGMQTQTAECLVIGEIICEK---LLVVLNKI 133

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig140835.2828.1 vs. uniprot

BLAST of mRNA_H-elongata_contig140835.2828.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5KRB1_9PHAE	6.560e-40	80.41	Tr-type G domain-containing protein n=2 Tax=Ectoca...	[more]
A0A820ME81_9BILA	1.430e-33	67.01	Hypothetical protein (Fragment) n=1 Tax=Adineta st...	[more]
A0A835ZB77_9STRA	1.470e-33	73.47	P-loop containing nucleoside triphosphate hydrolas...	[more]
A0A7S4D6B4_HETAK	1.040e-32	68.18	Hypothetical protein (Fragment) n=1 Tax=Heterosigm...	[more]
A0A2R5G8P6_9STRA	3.650e-32	69.70	Selenocysteine-specific elongation factor n=1 Tax=...	[more]
A0A2P6TQ88_CHLSO	3.680e-32	67.68	Selenocysteine-specific elongation factor n=1 Tax=...	[more]
A0A3M7Q3R4_BRAPC	1.290e-31	63.54	Selenocysteine-specific elongation factor n=1 Tax=...	[more]
A0A8J4FTB8_9CHLO	1.320e-31	61.62	Tr-type G domain-containing protein n=1 Tax=Volvox...	[more]
E1Z5S9_CHLVA	1.530e-31	65.66	Tr-type G domain-containing protein n=1 Tax=Chlore...	[more]
UPI00193A73C3	1.720e-31	65.98	selenocysteine-specific elongation factor-like n=1...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000795	Transcription factor, GTP-binding domain	PRINTS	PR00315	ELONGATNFCT	coord: 99..106 score: 37.38 coord: 13..21 score: 55.41 coord: 60..71 score: 33.44 coord: 44..54 score: 50.06
IPR000795	Transcription factor, GTP-binding domain	PFAM	PF00009	GTP_EFTU	coord: 9..106 e-value: 4.3E-19 score: 68.8
None	No IPR available	GENE3D	3.40.50.300		coord: 4..106 e-value: 8.2E-29 score: 102.3
None	No IPR available	PANTHER	PTHR43721	FAMILY NOT NAMED	coord: 8..106
None	No IPR available	PANTHER	PTHR43721:SF11	SELENOCYSTEINE-SPECIFIC ELONGATION FACTOR	coord: 8..106
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 8..106

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig140835	contig	H-elongata_contig140835:1..692 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig140835.2828.1	mRNA_H-elongata_contig140835.2828.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig140835 1..692 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig140835.2828.1 ID=prot_H-elongata_contig140835.2828.1|Name=mRNA_H-elongata_contig140835.2828.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=106bp
MHVSCGVHTQSRERGITLDLGFSAFTMEASECFPNNEFTHVQFTLVDCPG
HASLIRTIIGGAQIMDMMLLVVDATKGMQTQTTECVVIAEAVMTQGVDVI
VVLNKV

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR000795	TF_GTP-bd_dom
IPR027417	P-loop_NTPase