prot_H-elongata_contig140832.2827.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig140832.2827.1
Unique Nameprot_H-elongata_contig140832.2827.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length55
Homology
BLAST of mRNA_H-elongata_contig140832.2827.1 vs. uniprot
Match: D7G8P0_ECTSI (Superoxide dismutase [Fe] n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8P0_ECTSI)

HSP 1 Score: 94.7 bits (234), Expect = 3.930e-22
Identity = 44/55 (80.00%), Postives = 45/55 (81.82%), Query Frame = 0
Query:    1 LAKAIDASFGSMDAMKEQFGAAAAGVFGSGWAWLGCTPDGKLAITSTPNQGEPFF 55
            LAKAID +FGSMD MK QFG  AAGVFGSGWAWLGCTPDGKLAIT TPNQ  P  
Sbjct:  183 LAKAIDEAFGSMDEMKAQFGTTAAGVFGSGWAWLGCTPDGKLAITGTPNQDNPLM 237          
BLAST of mRNA_H-elongata_contig140832.2827.1 vs. uniprot
Match: A0A835ZFH9_9STRA (Superoxide dismutase [Fe] n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFH9_9STRA)

HSP 1 Score: 89.0 bits (219), Expect = 4.230e-20
Identity = 43/55 (78.18%), Postives = 45/55 (81.82%), Query Frame = 0
Query:    1 LAKAIDASFGSMDAMKEQFGAAAAGVFGSGWAWLGCTPDGKLAITSTPNQGEPFF 55
            L  AIDASFGS DAMKE+FGAAAAGVFGSGWAWLG T DGKL IT+TPNQ  P  
Sbjct:  158 LTMAIDASFGSFDAMKEKFGAAAAGVFGSGWAWLGVTKDGKLDITTTPNQDNPLM 212          
BLAST of mRNA_H-elongata_contig140832.2827.1 vs. uniprot
Match: L1K0Q9_GUITC (Superoxide dismutase n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1K0Q9_GUITC)

HSP 1 Score: 88.2 bits (217), Expect = 8.690e-20
Identity = 43/55 (78.18%), Postives = 45/55 (81.82%), Query Frame = 0
Query:    1 LAKAIDASFGSMDAMKEQFGAAAAGVFGSGWAWLGCTPDGKLAITSTPNQGEPFF 55
            L KAIDASFGSMD MKE+F AAAA  FGSGWAWLG TP+GKLAITSTPNQ  P  
Sbjct:  162 LQKAIDASFGSMDKMKEEFNAAAAKRFGSGWAWLGVTPEGKLAITSTPNQDNPLM 216          
BLAST of mRNA_H-elongata_contig140832.2827.1 vs. uniprot
Match: Q3L2Z3_HAELA (Superoxide dismutase n=1 Tax=Haematococcus lacustris TaxID=44745 RepID=Q3L2Z3_HAELA)

HSP 1 Score: 80.9 bits (198), Expect = 1.980e-17
Identity = 39/54 (72.22%), Postives = 41/54 (75.93%), Query Frame = 0
Query:    1 LAKAIDASFGSMDAMKEQFGAAAAGVFGSGWAWLGCTPDGKLAITSTPNQGEPF 54
            L  A+DASFGSMD MKE+F AAAAG FGSGWAWLG   DG L ITSTPNQ  P 
Sbjct:  104 LKAAVDASFGSMDVMKEKFNAAAAGRFGSGWAWLGVKADGSLGITSTPNQDNPL 157          
BLAST of mRNA_H-elongata_contig140832.2827.1 vs. uniprot
Match: A0A1V5KYE5_9BACT (Superoxide dismutase n=1 Tax=Verrucomicrobia bacterium ADurb.Bin474 TaxID=1852931 RepID=A0A1V5KYE5_9BACT)

HSP 1 Score: 78.6 bits (192), Expect = 1.260e-16
Identity = 38/55 (69.09%), Postives = 40/55 (72.73%), Query Frame = 0
Query:    1 LAKAIDASFGSMDAMKEQFGAAAAGVFGSGWAWLGCTPDGKLAITSTPNQGEPFF 55
            LAKAID +FGS DA KE F  A A  FGSGWAWL  TPDGKLA+TSTPNQ  P  
Sbjct:   98 LAKAIDQTFGSFDAFKEAFANAGANRFGSGWAWLVVTPDGKLAVTSTPNQDNPLM 152          
BLAST of mRNA_H-elongata_contig140832.2827.1 vs. uniprot
Match: A0A087SEE8_AUXPR (Superoxide dismutase n=1 Tax=Auxenochlorella protothecoides TaxID=3075 RepID=A0A087SEE8_AUXPR)

HSP 1 Score: 76.6 bits (187), Expect = 1.480e-16
Identity = 36/54 (66.67%), Postives = 43/54 (79.63%), Query Frame = 0
Query:    1 LAKAIDASFGSMDAMKEQFGAAAAGVFGSGWAWLGCTPDGKLAITSTPNQGEPF 54
            L +AI+ASFGS+DA+KE+F AAA   FGSGWAWL  TP+GKL +TSTPNQ  P 
Sbjct:   27 LKQAIEASFGSVDALKEKFNAAATTRFGSGWAWLVVTPEGKLVVTSTPNQDNPL 80          
BLAST of mRNA_H-elongata_contig140832.2827.1 vs. uniprot
Match: A0A7S3XQ28_HETAK (Superoxide dismutase [Fe] n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XQ28_HETAK)

HSP 1 Score: 79.0 bits (193), Expect = 2.540e-16
Identity = 38/55 (69.09%), Postives = 40/55 (72.73%), Query Frame = 0
Query:    1 LAKAIDASFGSMDAMKEQFGAAAAGVFGSGWAWLGCTPDGKLAITSTPNQGEPFF 55
            LA AID +FGSMDAMKE+F AAA G FGSGWAWLG   DGKL I  TPNQ  P  
Sbjct:  154 LATAIDEAFGSMDAMKEKFNAAATGQFGSGWAWLGVKADGKLGICGTPNQDNPLM 208          
BLAST of mRNA_H-elongata_contig140832.2827.1 vs. uniprot
Match: A0A2A4HVS3_9SPHN (Superoxide dismutase n=2 Tax=Proteobacteria TaxID=1224 RepID=A0A2A4HVS3_9SPHN)

HSP 1 Score: 77.0 bits (188), Expect = 6.760e-16
Identity = 38/55 (69.09%), Postives = 40/55 (72.73%), Query Frame = 0
Query:    1 LAKAIDASFGSMDAMKEQFGAAAAGVFGSGWAWLGCTPDGKLAITSTPNQGEPFF 55
            LA+AIDA+FGSMD MK  F AA  G FGSGW WL   PDGKLAITSTPNQ  P  
Sbjct:  119 LARAIDAAFGSMDKMKAAFKAAGTGRFGSGWVWLIVGPDGKLAITSTPNQDNPLM 173          
BLAST of mRNA_H-elongata_contig140832.2827.1 vs. uniprot
Match: A0A2V0PH72_9CHLO (Superoxide dismutase n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0PH72_9CHLO)

HSP 1 Score: 76.6 bits (187), Expect = 8.430e-16
Identity = 36/55 (65.45%), Postives = 40/55 (72.73%), Query Frame = 0
Query:    1 LAKAIDASFGSMDAMKEQFGAAAAGVFGSGWAWLGCTPDGKLAITSTPNQGEPFF 55
            L  AI+ +FGS+D MK +F AAAAG FGSGWAWLG  PDG L ITSTPNQ  P  
Sbjct:  104 LKAAIEGAFGSLDEMKAKFNAAAAGRFGSGWAWLGVKPDGSLGITSTPNQDNPLM 158          
BLAST of mRNA_H-elongata_contig140832.2827.1 vs. uniprot
Match: A0A4S4NJ53_9BACT (Superoxide dismutase n=1 Tax=Lewinella litorea TaxID=2562452 RepID=A0A4S4NJ53_9BACT)

HSP 1 Score: 76.3 bits (186), Expect = 8.910e-16
Identity = 37/55 (67.27%), Postives = 41/55 (74.55%), Query Frame = 0
Query:    1 LAKAIDASFGSMDAMKEQFGAAAAGVFGSGWAWLGCTPDGKLAITSTPNQGEPFF 55
            LA AID +FGS DA KE+F +AAAG FGSGWAWL    DGKLA+TSTPNQ  P  
Sbjct:   95 LASAIDKAFGSYDAFKEKFSSAAAGQFGSGWAWLIVKNDGKLAVTSTPNQDNPLM 149          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig140832.2827.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G8P0_ECTSI3.930e-2280.00Superoxide dismutase [Fe] n=1 Tax=Ectocarpus silic... [more]
A0A835ZFH9_9STRA4.230e-2078.18Superoxide dismutase [Fe] n=1 Tax=Tribonema minus ... [more]
L1K0Q9_GUITC8.690e-2078.18Superoxide dismutase n=1 Tax=Guillardia theta (str... [more]
Q3L2Z3_HAELA1.980e-1772.22Superoxide dismutase n=1 Tax=Haematococcus lacustr... [more]
A0A1V5KYE5_9BACT1.260e-1669.09Superoxide dismutase n=1 Tax=Verrucomicrobia bacte... [more]
A0A087SEE8_AUXPR1.480e-1666.67Superoxide dismutase n=1 Tax=Auxenochlorella proto... [more]
A0A7S3XQ28_HETAK2.540e-1669.09Superoxide dismutase [Fe] n=2 Tax=Heterosigma akas... [more]
A0A2A4HVS3_9SPHN6.760e-1669.09Superoxide dismutase n=2 Tax=Proteobacteria TaxID=... [more]
A0A2V0PH72_9CHLO8.430e-1665.45Superoxide dismutase n=1 Tax=Raphidocelis subcapit... [more]
A0A4S4NJ53_9BACT8.910e-1667.27Superoxide dismutase n=1 Tax=Lewinella litorea Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036314Manganese/iron superoxide dismutase, C-terminal domain superfamilyGENE3D2.40.500.20coord: 1..55
e-value: 8.5E-18
score: 66.2
IPR036314Manganese/iron superoxide dismutase, C-terminal domain superfamilySUPERFAMILY54719Fe,Mn superoxide dismutase (SOD), C-terminal domaincoord: 1..54
IPR019832Manganese/iron superoxide dismutase, C-terminalPFAMPF02777Sod_Fe_Ccoord: 1..54
e-value: 5.7E-15
score: 55.3
NoneNo IPR availablePANTHERPTHR43595FAMILY NOT NAMEDcoord: 1..55

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig140832contigH-elongata_contig140832:268..432 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig140832.2827.1mRNA_H-elongata_contig140832.2827.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig140832 268..432 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig140832.2827.1 ID=prot_H-elongata_contig140832.2827.1|Name=mRNA_H-elongata_contig140832.2827.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=55bp
LAKAIDASFGSMDAMKEQFGAAAAGVFGSGWAWLGCTPDGKLAITSTPNQ
GEPFF
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036314SOD_C_sf
IPR019832Mn/Fe_SOD_C