mRNA_H-elongata_contig140318.2802.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig140318.2802.1 vs. uniprot
Match: D7G3K5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3K5_ECTSI) HSP 1 Score: 194 bits (494), Expect = 1.690e-59 Identity = 93/100 (93.00%), Postives = 97/100 (97.00%), Query Frame = 1
Query: 1 RQDYNGVMDNIMQQLLSRELMYDPIKQICDKYPEWLATHRERLPTSDYQRYGKQYQSFQRVLAVYETEPDNFPRLMELMQDMQEHGQVPAEIIKELAPGL 300
++DYNGVMDNIMQQLLSRELMYDPIKQICD YPEWLATHRERL +DYQRYG+QYQSFQRVLAVYETEPDNFPRLMELMQDMQEHGQVPAEIIKELAPGL
Sbjct: 224 KEDYNGVMDNIMQQLLSRELMYDPIKQICDTYPEWLATHRERLAPADYQRYGQQYQSFQRVLAVYETEPDNFPRLMELMQDMQEHGQVPAEIIKELAPGL 323
BLAST of mRNA_H-elongata_contig140318.2802.1 vs. uniprot
Match: F0XX37_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XX37_AURAN) HSP 1 Score: 149 bits (375), Expect = 7.400e-44 Identity = 67/100 (67.00%), Postives = 87/100 (87.00%), Query Frame = 1
Query: 1 RQDYNGVMDNIMQQLLSRELMYDPIKQICDKYPEWLATHRERLPTSDYQRYGKQYQSFQRVLAVYETEPDNFPRLMELMQDMQEHGQVPAEIIKELAPGL 300
++D+N +++N+M+QLL+R+LMY+P+K +CDKYPEWLA E L +Y RYG QYQ FQRV+AVYETEPDNFPRLMEL+QD+Q++GQVP+EIIKELAP L
Sbjct: 27 KEDFNQIVENMMRQLLARDLMYEPMKLVCDKYPEWLAEKYESLSKEEYVRYGTQYQYFQRVVAVYETEPDNFPRLMELLQDLQKYGQVPSEIIKELAPAL 126
BLAST of mRNA_H-elongata_contig140318.2802.1 vs. uniprot
Match: A0A7S3M8F4_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M8F4_9STRA) HSP 1 Score: 152 bits (384), Expect = 1.620e-43 Identity = 66/100 (66.00%), Postives = 89/100 (89.00%), Query Frame = 1
Query: 1 RQDYNGVMDNIMQQLLSRELMYDPIKQICDKYPEWLATHRERLPTSDYQRYGKQYQSFQRVLAVYETEPDNFPRLMELMQDMQEHGQVPAEIIKELAPGL 300
++DYN V+D +M+QLLS++LMY+P KQICDK+PEWLA H++ + ++Y YGKQYQ+FQ+++AVY+TEPDNFPRLMELM DMQ++GQ PA+IIK+LAPGL
Sbjct: 166 KEDYNEVIDGVMRQLLSKDLMYEPAKQICDKFPEWLAIHKKNMNGAEYDNYGKQYQTFQKIIAVYDTEPDNFPRLMELMFDMQKYGQPPADIIKDLAPGL 265
BLAST of mRNA_H-elongata_contig140318.2802.1 vs. uniprot
Match: A0A482SN89_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SN89_9ARCH) HSP 1 Score: 148 bits (373), Expect = 2.010e-43 Identity = 66/100 (66.00%), Postives = 86/100 (86.00%), Query Frame = 1
Query: 1 RQDYNGVMDNIMQQLLSRELMYDPIKQICDKYPEWLATHRERLPTSDYQRYGKQYQSFQRVLAVYETEPDNFPRLMELMQDMQEHGQVPAEIIKELAPGL 300
++DYN V+D +M+QLLS++LMY+P K IC+KYPEWLA R+ L ++Y+ YG+QYQ FQ++LAVY+TEPDNFPRLMELM D+Q++GQ PAEIIK LAPGL
Sbjct: 34 KEDYNEVVDGVMRQLLSKDLMYEPTKMICEKYPEWLAVQRKNLTLAEYENYGRQYQCFQKLLAVYDTEPDNFPRLMELMFDLQQYGQPPAEIIKGLAPGL 133
BLAST of mRNA_H-elongata_contig140318.2802.1 vs. uniprot
Match: A0A7S1XKR9_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XKR9_9STRA) HSP 1 Score: 149 bits (377), Expect = 1.570e-42 Identity = 68/100 (68.00%), Postives = 84/100 (84.00%), Query Frame = 1
Query: 1 RQDYNGVMDNIMQQLLSRELMYDPIKQICDKYPEWLATHRERLPTSDYQRYGKQYQSFQRVLAVYETEPDNFPRLMELMQDMQEHGQVPAEIIKELAPGL 300
++D + VMD +M+QLL +++MY+P+K +C+K+PEWLA RE L DYQRYGK YQ FQR++A YETEPDNFPRLMELMQD+QE GQ PAEIIKELAPGL
Sbjct: 171 KEDMDEVMDGMMRQLLGKDIMYEPMKAVCEKFPEWLADKREHLSEDDYQRYGKMYQGFQRLVATYETEPDNFPRLMELMQDVQEFGQPPAEIIKELAPGL 270
BLAST of mRNA_H-elongata_contig140318.2802.1 vs. uniprot
Match: A0A485LKX2_9STRA (Aste57867_22427 protein n=2 Tax=Aphanomyces TaxID=100860 RepID=A0A485LKX2_9STRA) HSP 1 Score: 149 bits (375), Expect = 2.060e-42 Identity = 68/100 (68.00%), Postives = 84/100 (84.00%), Query Frame = 1
Query: 1 RQDYNGVMDNIMQQLLSRELMYDPIKQICDKYPEWLATHRERLPTSDYQRYGKQYQSFQRVLAVYETEPDNFPRLMELMQDMQEHGQVPAEIIKELAPGL 300
+ D+ G++D +MQQLLS+++MYDP+KQIC+KYPEWLA L DYQRYGKQYQ FQ++LAVYETEPDN+ RL ELMQ+MQE GQ P+EI+KELAPGL
Sbjct: 148 KNDFQGLVDGMMQQLLSKDVMYDPMKQICEKYPEWLAEKEAHLSKEDYQRYGKQYQYFQQILAVYETEPDNYARLSELMQEMQECGQPPSEIVKELAPGL 247
BLAST of mRNA_H-elongata_contig140318.2802.1 vs. uniprot
Match: A0A7S2BNY5_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BNY5_9STRA) HSP 1 Score: 146 bits (369), Expect = 2.200e-42 Identity = 67/100 (67.00%), Postives = 84/100 (84.00%), Query Frame = 1
Query: 1 RQDYNGVMDNIMQQLLSRELMYDPIKQICDKYPEWLATHRERLPTSDYQRYGKQYQSFQRVLAVYETEPDNFPRLMELMQDMQEHGQVPAEIIKELAPGL 300
++D+N V+D +M+QLLS+ELMY+PIKQ+C+KYPEWLA + L +Y+RYG QYQ FQR+ AVYETEPDN RLMELM D+Q++GQ PAEIIKELAPGL
Sbjct: 68 KEDFNQVVDGMMRQLLSKELMYEPIKQVCEKYPEWLAVQVDSLDKEEYERYGNQYQFFQRIRAVYETEPDNLARLMELMHDVQQYGQPPAEIIKELAPGL 167
BLAST of mRNA_H-elongata_contig140318.2802.1 vs. uniprot
Match: W4GV00_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GV00_9STRA) HSP 1 Score: 148 bits (373), Expect = 4.660e-42 Identity = 68/100 (68.00%), Postives = 83/100 (83.00%), Query Frame = 1
Query: 1 RQDYNGVMDNIMQQLLSRELMYDPIKQICDKYPEWLATHRERLPTSDYQRYGKQYQSFQRVLAVYETEPDNFPRLMELMQDMQEHGQVPAEIIKELAPGL 300
+ D+ G++D +MQQLLSR++MYDP+KQICDKYPEWLA L DY+RYGKQYQ FQ++LAVYE EPDN+ RL ELMQ+MQE GQ P+EI+KELAPGL
Sbjct: 152 KNDFQGLVDGMMQQLLSRDVMYDPMKQICDKYPEWLAEKEPHLSKHDYERYGKQYQYFQQILAVYENEPDNYARLSELMQEMQECGQPPSEIVKELAPGL 251
BLAST of mRNA_H-elongata_contig140318.2802.1 vs. uniprot
Match: A0A1V9Z335_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9Z335_9STRA) HSP 1 Score: 147 bits (370), Expect = 1.080e-41 Identity = 67/100 (67.00%), Postives = 84/100 (84.00%), Query Frame = 1
Query: 1 RQDYNGVMDNIMQQLLSRELMYDPIKQICDKYPEWLATHRERLPTSDYQRYGKQYQSFQRVLAVYETEPDNFPRLMELMQDMQEHGQVPAEIIKELAPGL 300
+ D+ G++D +MQQLLS+++MYDP+KQIC+KYPEWLA L DY+RYGKQYQ FQ++LAVYETEPDN+ RL ELMQ+MQE GQ P+EI+KELAPGL
Sbjct: 151 KNDFQGLVDGMMQQLLSKDVMYDPMKQICEKYPEWLAEKESVLSKEDYERYGKQYQYFQQILAVYETEPDNYARLSELMQEMQECGQPPSEIVKELAPGL 250
BLAST of mRNA_H-elongata_contig140318.2802.1 vs. uniprot
Match: A0A7S2BQB6_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BQB6_9STRA) HSP 1 Score: 146 bits (369), Expect = 3.900e-41 Identity = 67/100 (67.00%), Postives = 84/100 (84.00%), Query Frame = 1
Query: 1 RQDYNGVMDNIMQQLLSRELMYDPIKQICDKYPEWLATHRERLPTSDYQRYGKQYQSFQRVLAVYETEPDNFPRLMELMQDMQEHGQVPAEIIKELAPGL 300
++D+N V+D +M+QLLS+ELMY+PIKQ+C+KYPEWLA + L +Y+RYG QYQ FQR+ AVYETEPDN RLMELM D+Q++GQ PAEIIKELAPGL
Sbjct: 179 KEDFNQVVDGMMRQLLSKELMYEPIKQVCEKYPEWLAVQVDSLDKEEYERYGNQYQFFQRIRAVYETEPDNLARLMELMHDVQQYGQPPAEIIKELAPGL 278 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig140318.2802.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig140318.2802.1 >prot_H-elongata_contig140318.2802.1 ID=prot_H-elongata_contig140318.2802.1|Name=mRNA_H-elongata_contig140318.2802.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=93bp MDNIMQQLLSRELMYDPIKQICDKYPEWLATHRERLPTSDYQRYGKQYQSback to top mRNA from alignment at H-elongata_contig140318:3..1529- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig140318.2802.1 ID=mRNA_H-elongata_contig140318.2802.1|Name=mRNA_H-elongata_contig140318.2802.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1527bp|location=Sequence derived from alignment at H-elongata_contig140318:3..1529- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig140318:3..1529- >mRNA_H-elongata_contig140318.2802.1 ID=mRNA_H-elongata_contig140318.2802.1|Name=mRNA_H-elongata_contig140318.2802.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=558bp|location=Sequence derived from alignment at H-elongata_contig140318:3..1529- (Himanthalia elongata Himel1 dioecious)back to top |