prot_H-elongata_contig1401.2793.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig1401.2793.1
Unique Nameprot_H-elongata_contig1401.2793.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length286
Homology
BLAST of mRNA_H-elongata_contig1401.2793.1 vs. uniprot
Match: D7G5R2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5R2_ECTSI)

HSP 1 Score: 228 bits (582), Expect = 2.390e-68
Identity = 135/255 (52.94%), Postives = 167/255 (65.49%), Query Frame = 0
Query:    2 GYSGGAMHVEGTVTFEHAAHFEGNQAGGGGG------SCGGAVSIGSNGRVVFSEFTTFEDNSSERGGALCNLGSTIFYRRSFFTGNSAIASGDGSEGVAVEGDGGAVYTAHDSEMVFRRKSTMLANSADGSGGALYNSGTSSFDTSAAFQGNCAKGISR----HSDDLQTF------EDEVGGGHIFNRGNLIVRGDASFREGATSANGGAVYTLSGERTVLGGITTLVDNSADGQCSHLFSHLGGGEVRLMTT 240
            GYSGGA H +G VTFE+AAHF GN+A G G       SCGG VS+G  GRV FSE  +FE+NS+  GGALCN G   F+RRSFF GN A     G     V  DGGAV+T   S  +F R+STML N A GSGG++YN+G S+F+TSAAF+GN A   +R     S +++        E E GGGH+FNRG L + GDASF +G ++ +GGAVYT+SGE T+L GIT+   NSA G C  +F+ L G EVRL TT
Sbjct:  139 GYSGGAFHADGEVTFENAAHFVGNRALGQGSRGQEAHSCGGGVSVGGTGRVEFSELASFEENSAWTGGALCNRGWAKFFRRSFFNGNRA----SGGASTRVGADGGAVFTEEGSTTIFTRRSTMLRNWAAGSGGSVYNAGVSTFETSAAFRGNTAAAAARVEAGSSQNVEAALPPSPPETETGGGHLFNRGYLEIMGDASFIDGVSATDGGAVYTVSGEDTILSGITSFHGNSARGNCKDVFAALAGSEVRLTTT 389          
BLAST of mRNA_H-elongata_contig1401.2793.1 vs. uniprot
Match: A0A6H5JTS8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTS8_9PHAE)

HSP 1 Score: 100 bits (248), Expect = 9.530e-21
Identity = 55/89 (61.80%), Postives = 63/89 (70.79%), Query Frame = 0
Query:    2 GYSGGAMHVEGTVTFEHAAHFEGNQAGGGGG------SCGGAVSIGSNGRVVFSEFTTFEDNSSERGGALCNLGSTIFYRRSFFTGNSA 84
            GYSGGA H +G VTFE+AAHF GN+A G G       SCGG VS+G  GRV FSE  +FE+NS+ RGGALCN G   F+RRSFF GN A
Sbjct:  190 GYSGGAFHTDGEVTFENAAHFVGNRALGQGSRGQEAHSCGGGVSVGGTGRVEFSELASFEENSAWRGGALCNRGWAKFFRRSFFNGNQA 278          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig1401.2793.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G5R2_ECTSI2.390e-6852.94Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JTS8_9PHAE9.530e-2161.80Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig1401contigH-elongata_contig1401:7151..10618 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig1401.2793.1mRNA_H-elongata_contig1401.2793.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig1401 6708..10705 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig1401.2793.1 ID=prot_H-elongata_contig1401.2793.1|Name=mRNA_H-elongata_contig1401.2793.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=286bp
MGYSGGAMHVEGTVTFEHAAHFEGNQAGGGGGSCGGAVSIGSNGRVVFSE
FTTFEDNSSERGGALCNLGSTIFYRRSFFTGNSAIASGDGSEGVAVEGDG
GAVYTAHDSEMVFRRKSTMLANSADGSGGALYNSGTSSFDTSAAFQGNCA
KGISRHSDDLQTFEDEVGGGHIFNRGNLIVRGDASFREGATSANGGAVYT
LSGERTVLGGITTLVDNSADGQCSHLFSHLGGGEVRLMTTPPPAQAGEAL
EGIARMATKDVGTDVMNVKRRGRMTSSVRTTPCQP*
back to top