mRNA_H-elongata_contig14009.2792.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig14009.2792.1
Unique NamemRNA_H-elongata_contig14009.2792.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
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BLAST of mRNA_H-elongata_contig14009.2792.1 vs. uniprot
Match: D8LF16_ECTSI (PDZ domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LF16_ECTSI)

HSP 1 Score: 491 bits (1263), Expect = 1.050e-150
Identity = 345/781 (44.17%), Postives = 420/781 (53.78%), Query Frame = 1 
Query:    1 MMFVAGMMGIKRQSLGKLRSRREARVSATPAVVMDLPPSAMEDPTPFVPPSQYQVRLNVSRGLGLSLNITGNDVRVKGFSPVEDGEIGPAEACGKIQAIKKWRTKSLIVGDALVRVNHEQLTLLNHELAVSVLRRVVETGADQLVLMHFEYAENSSESAPGSSLP-------INPATRTRLYSSESLTASYERLSLQAKMVNVNRGDVFRSESWHADDSPTLASEMGGVGVDQGGSWSDTRRQTLVATAASQGLGLDARNVEVGGAVGRAGAFSEAIELKG------------RNKGLGRLWGESDAGIGSVGEGSGHVYLGDMGLAQAQRTLRNIAQDVQSPPPLPKELYRGRHRRRPRRRRYTLALRHPGMVSNHGEFGSRGGC---------GGIGGGPGATRRSIDLLVCHEVVRGELRQLESELERQTAMVARRNRWSSVRGMVGKIV--C------SSNQPVVPCRAPLSWLSPAAASPDIGNTSNTKKGGNASLRSRYVSAIDVADSDLSDFLSDGDPSSAFPGTNSGRGRRNVSGE--GVAKLLD---------------------EEMNAACDIFLEAVSTAGMENELLQTLALEVSHVGPPRPLPAAAYDLQTALESVQHFATQTLSGVVQVEAVRKT-AQEFFAGTLSLSPTSIPMGGGQRXXXXXXXXXXXXXXXXAGLREGWELWWPPRELTEALALVTARQMANAMRCDAEPLIQIWMRCFTPLEVRHRERLWGALAPSP-LDSEHVYQGRWHRQLVCGLVTLFAQV 2160
            M+ V+GMMG+KRQ +G LRSRRE+R+      V +LP SAM+DP PFVPPSQY+VRLNVSRGLGLSLNITGNDVRVKGFS V+ G+IGPA+ACG IQ           VGDALVRVNHEQL LLNHE  V VLR ++ T   Q++L+ F YAE+S      ++         + P TR    S+     S  R+S       ++  + FRSESWH    P  A E  G G +   S S  RR T  A   SQ LG        G A  R G+ +EA   +G            R K  G LWGE + G+     GS H+YLGDMG A+ QRTL+ IA+DVQ PPPLP+ELYRGR                                         GG+          I+L+ C  VV+ E+ +LE ELERQ A +ARRNR SS R +V K++  C      S + P    R   S   PAA +       ++  GG  +      S   +      D     D  S      +      VSGE  GV +  D                          ACDIFLEAVSTAG+++ELL    +EV  V PPRPLPAAAYDLQTALESVQHFATQTL+GVVQ  AVR +   +     LS + +   + GG R                AGL E WE  WPPRELT AL LVTARQMA+AMRCD EPLIQIWMRCFTP++ +HR +LWG LAP P ++   +  GRWHRQLVCGL+TL+AQV
Sbjct:    1 MLLVSGMMGVKRQCMGTLRSRRESRIPTHLVTVTELPVSAMDDPNPFVPPSQYEVRLNVSRGLGLSLNITGNDVRVKGFSTVQGGDIGPAQACGDIQ-----------VGDALVRVNHEQLNLLNHENVVRVLRGLLRTTGSQVLLLRFAYAEDSPRLLRATTXXXXXXXXXLPPKTRVPRPSTMENPRSEPRVS----HGGLDTEEAFRSESWHGSSKPPRAREGQGQGREMARSVSPHRR-TGPAVLRSQSLGEGGPPTVAGFA--RKGSGAEAGHKEGEWEGWTVDGMRPRGKRRGELWGEPELGLAGGDGGSRHIYLGDMGHARVQRTLQAIAEDVQPPPPLPRELYRGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGGV----------INLVSCQGVVQAEVSRLEGELERQRARLARRNRRSSARSLVAKMLHKCGPSALFSDDSPSPTARG--SGRGPAAGA--FSRRRSSLAGGTGASWREENSGGGLGRPSDGDLTDSSDDISGTVARRATAAAARVSGEASGVGQGEDGFSIDDXXXXXXXXXXXXXXXXXXXGACDIFLEAVSTAGLQDELLCNRDVEVLGVDPPRPLPAAAYDLQTALESVQHFATQTLAGVVQAAAVRGSDLYDNDYDPLSGARSPRHLAGGGRAGKGSAAKEAREGGVAAGLVEEWEAAWPPRELTAALGLVTARQMAHAMRCDTEPLIQIWMRCFTPVDAKHRTKLWGGLAPPPSVNDRFLEAGRWHRQLVCGLLTLYAQV 749
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BLAST of mRNA_H-elongata_contig14009.2792.1 vs. uniprot
Match: A0A6H5JMZ7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMZ7_9PHAE)

HSP 1 Score: 206 bits (524), Expect = 5.260e-52
Identity = 112/181 (61.88%), Postives = 127/181 (70.17%), Query Frame = 1 
Query: 1630 LEVSHVGPPRPLPAAAYDLQTALESVQHFATQTLSGVVQVEAVRKTAQEFFAGTL-SLSPTSIP--MGGGQRXXXXXXXXXXXXXXXXAGLREGWELWWPPRELTEALALVTARQMANAMRCDAEPLIQIWMRCFTPLEVRHRERLWGALAPSP-LDSEHVYQGRWHRQLVCGLVTLFAQV 2160
            L V  V PPRPLPAAAYDLQTALESVQHFATQTL+GVVQ  AVR    + +     SLS    P  + GG R                AGL EGWE  WPPRELT AL LVTARQMA+AMRCDAEPLIQIWMRCFTP++ +HR +LWG LAP+P ++   +  GRWHRQLVCGL+TL+AQV
Sbjct:   33 LPVLGVDPPRPLPAAAYDLQTALESVQHFATQTLAGVVQAAAVR--GSDLYDNDYDSLSGARSPRHLAGGGRAGKGSGAKEARDGGVAAGLVEGWEAAWPPRELTAALGLVTARQMAHAMRCDAEPLIQIWMRCFTPVDAKHRTKLWGGLAPAPSVNDPFLEAGRWHRQLVCGLLTLYAQV 211
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BLAST of mRNA_H-elongata_contig14009.2792.1 vs. uniprot
Match: A0A6H5JMH3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMH3_9PHAE)

HSP 1 Score: 161 bits (408), Expect = 1.010e-40
Identity = 126/339 (37.17%), Postives = 163/339 (48.08%), Query Frame = 1 
Query:    1 MMFVAGMMGIKRQSLGKLRSRREARVSATPAVVMDLPPSAMEDPTPFVPPSQYQVRLNVSRGLGLSLNITGNDVRVKGFSPVEDGEIGPAEACGKIQAIKKWRTKSLIVGDALVRVNHEQLTLLNHELAVSVLRRVVETGADQLVLMHFEYAENS-----SESAPGSSLPINPATRTRLYSSESLTASYERLSLQAKMVNVNRGDVFRSESWHADDSPTLASEMGGVGVDQGGSWSDTRRQTLVATAASQGLGLDARNVEVGGAVGRAGAFSEAIELKG------------RNKGLGRLWGESDAGIGSVGEGSGHVYLGDMGLAQAQRTLRNIAQDVQ 966
            M+ V+GMMG+KRQ LG LRSRRE+R+ A  A V +LP SAM+DP PFVPPSQY+V                                                      GDALVRVNHEQL LLNHE  V VLR ++ T   Q++L+ F YAE+S     + ++P     + P T     S+     S  R+S      +++  + FRSESWH    P  A +  G G +   S S  RR T  A   SQ LG        G  +   G+ +EA + +G            R K  G LWGE + G+     GS H+YLGDMG A+ QRTL+ IA+DVQ
Sbjct:    1 MLLVSGMMGVKRQCLGTLRSRRESRIPAHLATVTELPVSAMDDPNPFVPPSQYEV------------------------------------------------------GDALVRVNHEQLNLLNHENVVRVLRGLLRTTGSQVLLLRFAYAEDSPRLLRATTSPXXXXXLPPKTPGPRPSTMENPQSEPRVS----QSDLDTEEAFRSESWHGSRKPPRARKGQGQGREMARSVSPHRR-TGPALLRSQSLGEGGPPAVAG--LAHKGSGAEAGDKEGEREGWAVDGMRPRGKRRGVLWGEPEMGLAGGDGGSRHIYLGDMGHARVQRTLQAIAEDVQ 278
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BLAST of mRNA_H-elongata_contig14009.2792.1 vs. uniprot
Match: A0A835Z5M4_9STRA (PDZ domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5M4_9STRA)

HSP 1 Score: 82.4 bits (202), Expect = 1.720e-12
Identity = 59/164 (35.98%), Postives = 80/164 (48.78%), Query Frame = 1 
Query:    7 FVAGMMGIKRQSLGKLRSRREARVSATPAVVMDLPPSAMEDPTPFVPPSQYQVRLNVSRGLGLSLNITGNDVRVKGFSPVEDGEIGPAEACGKIQAIKKWRTKSLIVGDALVRVNHEQLTLLNHELAVSVLRRVVETGADQLVLMHFEYAENS-----SESAPG 483
            F  GM GIKR     + S               LP S+++DP+PFVPPSQY  RL+ S+GLG++L ITG  VRV GF+P  +G +  A+  G I            VGD L+ VN   LTL+     + VLR +     +  V + F Y +       +E  PG
Sbjct:   78 FAYGMYGIKRIRAASIGS---------------LPASSVDDPSPFVPPSQYIARLDASKGLGINLQITGVKVRVGGFAPAANGAMSAAQLSGIIS-----------VGDVLLGVNGRDLTLMRFNDILGVLRALPRI-KEGTVTLRFAYGQEEQLLLEAEQEPG 214
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig14009.2792.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D8LF16_ECTSI1.050e-15044.17PDZ domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5JMZ7_9PHAE5.260e-5261.88Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JMH3_9PHAE1.010e-4037.17Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835Z5M4_9STRA1.720e-1235.98PDZ domain-containing protein n=1 Tax=Tribonema mi... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig14009contigH-elongata_contig14009:435..8104 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionPDZ domain
Ec32 orthologEc-21_006350.1
Exons9
Model size2160
Cds size2160
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929833.0941832-CDS-H-elongata_contig14009:434..5871622929833.0941832-CDS-H-elongata_contig14009:434..587Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig14009 435..587 -
1691679176.0940132-CDS-H-elongata_contig14009:434..5871691679176.0940132-CDS-H-elongata_contig14009:434..587Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig14009 435..587 -
1622929833.1072576-CDS-H-elongata_contig14009:1850..22221622929833.1072576-CDS-H-elongata_contig14009:1850..2222Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig14009 1851..2222 -
1691679176.105606-CDS-H-elongata_contig14009:1850..22221691679176.105606-CDS-H-elongata_contig14009:1850..2222Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig14009 1851..2222 -
1622929833.119956-CDS-H-elongata_contig14009:3540..39341622929833.119956-CDS-H-elongata_contig14009:3540..3934Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig14009 3541..3934 -
1691679176.1154184-CDS-H-elongata_contig14009:3540..39341691679176.1154184-CDS-H-elongata_contig14009:3540..3934Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig14009 3541..3934 -
1622929833.1350026-CDS-H-elongata_contig14009:5092..53671622929833.1350026-CDS-H-elongata_contig14009:5092..5367Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig14009 5093..5367 -
1691679176.1262546-CDS-H-elongata_contig14009:5092..53671691679176.1262546-CDS-H-elongata_contig14009:5092..5367Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig14009 5093..5367 -
1622929833.1509151-CDS-H-elongata_contig14009:5917..62581622929833.1509151-CDS-H-elongata_contig14009:5917..6258Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig14009 5918..6258 -
1691679176.1395183-CDS-H-elongata_contig14009:5917..62581691679176.1395183-CDS-H-elongata_contig14009:5917..6258Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig14009 5918..6258 -
1622929833.1757815-CDS-H-elongata_contig14009:6345..66461622929833.1757815-CDS-H-elongata_contig14009:6345..6646Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig14009 6346..6646 -
1691679176.1499135-CDS-H-elongata_contig14009:6345..66461691679176.1499135-CDS-H-elongata_contig14009:6345..6646Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig14009 6346..6646 -
1622929833.1903794-CDS-H-elongata_contig14009:6836..69981622929833.1903794-CDS-H-elongata_contig14009:6836..6998Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig14009 6837..6998 -
1691679176.1588564-CDS-H-elongata_contig14009:6836..69981691679176.1588564-CDS-H-elongata_contig14009:6836..6998Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig14009 6837..6998 -
1622929833.2023365-CDS-H-elongata_contig14009:7478..75841622929833.2023365-CDS-H-elongata_contig14009:7478..7584Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig14009 7479..7584 -
1691679176.1698954-CDS-H-elongata_contig14009:7478..75841691679176.1698954-CDS-H-elongata_contig14009:7478..7584Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig14009 7479..7584 -
1622929833.2264874-CDS-H-elongata_contig14009:8048..81041622929833.2264874-CDS-H-elongata_contig14009:8048..8104Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig14009 8049..8104 -
1691679176.177405-CDS-H-elongata_contig14009:8048..81041691679176.177405-CDS-H-elongata_contig14009:8048..8104Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig14009 8049..8104 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig14009.2792.1prot_H-elongata_contig14009.2792.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig14009 435..8104 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig14009.2792.1

>prot_H-elongata_contig14009.2792.1 ID=prot_H-elongata_contig14009.2792.1|Name=mRNA_H-elongata_contig14009.2792.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=720bp
MMFVAGMMGIKRQSLGKLRSRREARVSATPAVVMDLPPSAMEDPTPFVPP
SQYQVRLNVSRGLGLSLNITGNDVRVKGFSPVEDGEIGPAEACGKIQAIK
KWRTKSLIVGDALVRVNHEQLTLLNHELAVSVLRRVVETGADQLVLMHFE
YAENSSESAPGSSLPINPATRTRLYSSESLTASYERLSLQAKMVNVNRGD
VFRSESWHADDSPTLASEMGGVGVDQGGSWSDTRRQTLVATAASQGLGLD
ARNVEVGGAVGRAGAFSEAIELKGRNKGLGRLWGESDAGIGSVGEGSGHV
YLGDMGLAQAQRTLRNIAQDVQSPPPLPKELYRGRHRRRPRRRRYTLALR
HPGMVSNHGEFGSRGGCGGIGGGPGATRRSIDLLVCHEVVRGELRQLESE
LERQTAMVARRNRWSSVRGMVGKIVCSSNQPVVPCRAPLSWLSPAAASPD
IGNTSNTKKGGNASLRSRYVSAIDVADSDLSDFLSDGDPSSAFPGTNSGR
GRRNVSGEGVAKLLDEEMNAACDIFLEAVSTAGMENELLQTLALEVSHVG
PPRPLPAAAYDLQTALESVQHFATQTLSGVVQVEAVRKTAQEFFAGTLSL
SPTSIPMGGGQRGGQRAAKEAREAATAAAGLREGWELWWPPRELTEALAL
VTARQMANAMRCDAEPLIQIWMRCFTPLEVRHRERLWGALAPSPLDSEHV
YQGRWHRQLVCGLVTLFAQV
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mRNA from alignment at H-elongata_contig14009:435..8104-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig14009.2792.1 ID=mRNA_H-elongata_contig14009.2792.1|Name=mRNA_H-elongata_contig14009.2792.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=7670bp|location=Sequence derived from alignment at H-elongata_contig14009:435..8104- (Himanthalia elongata Himel1 dioecious)
ATGATGTTTGTGGCCGGGATGATGGGAATCAAGCGCCAGAGCTTGGGCAA
GCTCCGGTGTGTTCAGGGGGCGAACGGGGTGGCACCTCTGGGTGCATCTA
TACTTATTATACGAAGTTCCTGTTACCCGTCTTTAGAAATATATGGGCTA
CAGTGTTAAAAGTTTTTTTGTACAAGTGTGCTTTTTATTTTTTGTTTTCC
TCAACGACGAACTTTTGGAGAGCGAAATAATGCCAGCCATGGCTGTATTC
ATCGAGTAGGCGTTCTCGAAACACGGATAAAATCCGAAGCCCGTGGACAA
GCGTGCCGTCGAGCTAGTGTCCTGTTTTTCGCCCGCTTGCGCCTCGTTGT
CCACCTTGCGTAGAAAGTATTCTGATGAGAGAGAGAAAGCGTGCGCCTCT
CTTGGCTGCAGCGTGGAGAGTGGGTGTTTATCCAGCAGGCTATCAAAAAG
TGTAGAGCTAACCGTCGATAATGACAGAAGAAGAGGCACCCACAACGTTC
ACCGTCCCGGTTTCCTTCAGGTCTCGCCGCGAGGCAAGAGTGAGCGCAAC
CCCCGCGGTGGTGATGGATCTTCCTCCGTCCGCCATGGAGGACCCCACCC
CCTTCGTGCCGCCCAGCCAATACCAGGTGGGGATGTAGTCAGGATATGAC
AATAAAGTGTAGGATATGATAGAATATGATCGCACCGAAGAGCGAAGAGG
CCAGCTCTATGAATAGTCAGCACGGGAAGTCGCCGTGCGAACGGCTCGAT
TTGGATGTTCGGCGTGGGCGCTTGACGCCCGCTCTTGGGGGTATGCCGCC
ATCTTTCGACGCTGCCGCATGTCCGGAAATGGATATAAGGCGATGAACGG
CAATGCGTGATGGTTTTTGTGCTTCCGTGGGGATTTCCTGTTTTAACGGC
GTGGGAGAAGACGGGGGCGGTGCGCATGCGCGCGCGTGTATGTGTGTTTG
CTCTCGATTAGAGACGGTCTGGTCTCCCCTAGGGTATATAGTTGTGATGC
GATGCTTTTTTATTTTCATGCTAAGCGCGCCTATCAACCATGCTATGCTG
GTTGCTTCTATTGAGGTGGGTTTGCGTTGCGATTCGCATGGTGTGGGATG
AAGCAGGTCCGCCTGAACGTGTCGAGGGGCCTGGGGCTATCCCTCAATAT
CACCGGCAACGATGTGCGAGTCAAGGGTTTCTCTCCCGTGGAAGACGGGG
AGATTGGACCCGCGGAGGCGTGCGGAAAGATACAGGCAATTAAAAAATGG
CGCACGAAGAGCCTAATTGTGTACATCATATTACCGCCAGTGACGTCACG
TAGTGCGAAATAAATATTTTTAAGAAGTCTTATTGCTGTACCGCGTCTCC
CGCTAGCCACGCTTGTTCCAAAATTCAACTAGCGCCGTGTTAACTCTCCC
CCCCCCAAAATTAACGAGCTGCTGACGTTAAGTGTACGTTGGCGACGATT
GTGGTCAGGTCGGTGATGCTCTGGTGCGCGTCAACCATGAACAGTTGACT
CTCCTCAACCACGAACTCGCGGTAAGCGTTCTCAGGCGCGTCGTCGAGAC
CGGCGCCGACCAGCTCGTCCTCATGCACTTCGAGTACGCCGAGAACTCAT
CTGAGTCTGCGCCAGGAAGCTCGCTCCCAATCAACCCCGCGACGAGGACA
CGCCTCTACTCCTCGGAATCCTTGACGGCATCCTACGAACGGCTGTCTCT
TCAGGCGAAAATGGTGAATGTCAACCGAGGCGACGTGTTTCGATCAGAGT
CGTGGCACGGTTTGAGAAACCTCGGATGCAGGCAGGGACAAGGAGGGAAT
GCTTTGAGAATATCCAGACGTAATTCACACACGTCGAGAGACAGAGCGGA
TGACTCGCCGACGTTGGCTTCCGAAATGGGTGGGGTGGGCGTGGATCAGG
GTGGTAGTTGGAGCGACACGCGCAGGCAGACGTTGGTAGCGACGGCCGCT
TCTCAGGGGCTTGGGCTTGACGCCCGGAATGTTGAAGTAGGTGGTGCCGT
AGGAAGAGCAGGCGCGTTTAGCGAAGCGATAGAGTTGAAGGGACGGAACA
AGGGTCTGGGAAGGTTGTGGGGAGAATCGGACGCGGGAATCGGCAGCGTC
GGAGAGGGCAGCGGGCATGTCTATCTGGGAGACATGGGGTTGGCGCAGGC
CCAGAGGACGCTGAGAAACATCGCTCAAGACGTCCAGGTGATGTACAACT
TGTTTTCATTTCTCTTCTATATGGCGTAGTGTAGCTAGTGGCTGTTATAG
CCGGTAGAGGGATGTGACCCGAATGGTTTGCAAGGAACGACGCTGGGTTG
TGACAAGATGGTGGTGTCGATGTTGCTAAAGTGAAACTAACCAAACAGCT
TCCCACGATATACCACCGAATCGTTCAACAAGTAGGGACTCGACCTAACG
GTTTCTCAGACGGCCGCGATGTTTCGCAAACGGAAGCGACTCGCGCTTCT
TATGACATGACTCGCCGTCCCGTCACGCATCCGTCCGTGCTGCCCCACCG
TATTCCGTTTCCTCACAGAGCCTTCACCGAATCAGCTACTCCGCGGAGGA
AGCTCGCTTCTACCACGGCCGTGGCAAGCCGAGCCTGTCCAACCCATCCG
CCGCTTTCATCGAAAGCCGAGCCCCTCCACCATCGGTCATGCTCGCCGCG
CCCAGCCCGACCTCTCCCCGACCCTTACCATTTAGTGGTGCTGGTGCGGC
CAAGGGAAAACCTGGGAGCTGTATAGGGGGCGTCGAGTCGCCCCCCCCAC
TACCGAAGGAGCTGTATAGGGGGCGTCACCGTCGTCGTCCTCGCCGCCGT
CGATACACCCTCGCCCTCCGCCACCCGGGGATGGTCAGTAACCACGGAGA
ATTTGGCTCACGGGGTGGGTGTGGGGGTATCGGTGGAGGACCAGGGGCGA
CGAGGCGATCGATCGATCTCCTTGTCTGCCACGAGGTTGTCCGGGGAGAG
CTACGACAGTTGGAGAGTGAGCTGGAGCGGCAGACAGCGATGGTGGCGAG
ACGGAATCGATGGTGGGATATACTGCGTGTAAATAGTGGGCGGCGACAAA
AAGGCGTGTGTATTTGTGTGTGTGTATGTGTGTGTGTGTGTGTGTGTGCG
TTTTTTCAAAGGGAGAAAACATACTTGACGAAATCAGTGTTTTTTACAAT
CTAGCGGCAGAGAGCGTCACGAACGGGGACCGGACTGGACCGGACCGGAC
CACCTTCATAACCGACCGGTGGCAACCTTGTGTGTTTCGTAAGGCGATCA
TACCGTCGAAACAAAACGGAATATAGTGTTCGCGCGTTGCAAACCAATCG
CCATCTTCCTGTCCACAACGCAGAAAAGAAGAGAGGAGAGAAAACACACA
TCAAAAGAGAAGGGGTCGGCGGTTTCCAAAACTCTCAGCTGATCTAGTCC
CAAGTCGACGAAGCATGCGCGATCCGGTCCCAAGCTAAAGTATCATCCGA
TCTTATCTCGAGAAAAGGCTTGATGAACTTGTCTCCGAATTACACTTCTC
TCTGTGAGCAAGTTATATTTGTAAGCACGTCCCTGCTGTATTACTGTGTG
CAATTACCGAGTGTCTCATTCTCGCTGTCCACACCTCAAACCTCAAGGGG
TGTCCCAGTATCCCCCGTGCGCTTCTCTTTTGTGTGTCGTCGTTTTTGTT
GTGTTGGGCTATTGTGCTTTCGTGCTGGTGCTACGTACTGTTTGATTTTT
TGTACGCTTTTGTGTTTGTGCTTGTAGTTATTAAATTGCATATATTAGCG
CAATCCGGACATGTCACATCCTAGTATAGTCATTCTGGGCTACACGCATT
GATCCTCCCTCCCAATGGGGGATTAGTAAGATTTGCTACAAAAACCTCTG
ATCAGATGTGACAAAACAAACATATTGTGTATGTATATTTATTAAATTGC
ACATAACCGCGCAATCCGGCCCTGTCATGCTAGAAGCATTGATCCTCCCT
CCCAATGGGTACAGTATGTGTGTATGTGTGTATATATATTTATTAAATTG
CACGTAACCACGCTGTCCGGCTCTGTCATGCTAGTCCTTCTAGACTACTC
TCGTATATATTTATACTACGTACAGATGTGTGTGTGTGTGTGTGTTCGTT
TATTTTATGTGATTTTTGGCACGTGCGTGCCGGCGCAACGGTTGTTCTTT
TTGGCCCGTGTTCATCTCAGGTCATCCGTACGCGGAATGGTGGGGAAGAT
CGTGTGCAGCTCCAACCAACCGGTTGTTCCATGCCGCGCACCGCTTTCAT
GGCTCTCACCCGCGGCGGCCTCCCCCGACATTGGTAATACTAGTAACACA
AAGAAGGGAGGAAACGCCTCCTTGAGATCGCGGTACGTGTCGGCGATCGA
CGTTGCGGACAGCGACTTGAGCGATTTTCTCAGCGACGGCGACCCCTCAT
CAGCCTTCCCAGGTACGAATTCGGGGAGGGGAAGGCGAAACGTTTCCGGT
GAAGGTGTCGCGAAGCTGCTCGATGAAGAGATGAACGCCGCCTGCGACAT
TTTTTTGGAGGCCGTCTCGACCGCGGGCATGGAAAACGAGCTCCTGCAAA
CCCTTGCTCTCGAGGTGGGTCCACGCTGGCGTCTGCGTTTACTGTTGAGC
CGATGGAGTGTTGGTTACGTATGGGCAATACGCCACGATTCTGATTTGGT
GTAGCTCGCTCGGCCATTCACCACGATCATTTCACGATGATACATGCAAA
CTTATCTGTTCACGTTGATCGTAACACCTTGTAGAGTGCTGGTTAGCTTG
GCCTTGTTTATCGTACAGTTAGATGCTACTGTACCTCCCATATGCTCTTA
TTGTAGCCTGATATATTAGGGTTAACGACCACTAGTAATACGACGGTGAT
ACGGTAATGCTATACGGTTATGCTATACGGTGGTGTAACACGATGGTAAT
ACGATGGTAAGAGTACGAGTAAACACGATATCATAACGTTATTTAGTAAT
ACGATAGCAATACGGTAGCAATATTAATACGATTAGCAATATCAGTACGA
TCGTAATTCGATGGTAAGACGGCAGTGATGGCTTCGCACAGTAGTATTTC
ATCATAGAATATGCATACTGTTTCGAATCCTCGGAGTCTGGTTCAGATCG
CAGGACAACCGTAGGAGAATTGAGACACTTTCTTCAGAGAAGCGCTGATT
GGACCGCCTCAAGGTTATAACCGAAGCTGTGATAGGAACGCCCCGAAACC
CGTTCTGGACATGAGTATGCCTGATGAGATTACTTTTATATTGAATTTAG
TGTGTAAAAAAAGATCGAGTTCCATAAGGGTTAAAATAGCCAATTAACTC
CTTGTTCTAACGCATTGTCGACAGGAGCCGTGGGCGGTCGGTCCTTGGCG
ACTGCTACCACGGCGGGTGACTGGGTCCCTATGCACCAAAGTCCTGTATA
TCGGCGATTACCAATAGTTTACGTTTCGTACCTAACGAGAATATATCTCG
GTTTGTTGCGCCGAAAGCCAATGCTTTTTATACTGTACTGTTGTAGTAAC
GCCTCCTCTTCCTTACCGGGATTTGACATTATATCTTCTTCATCTTACTC
TGTTTTTGTTTTTATCAGAAAAATCTTAAACTCATTCCAACCCTCCGAAC
TCTGTTTTGGTTTGTTTGTTTGTTTGTTTGTTTGCTCTTCTTTAGTCAGT
CTATTTGTGCTTTTGTGTTGTTTTGTTTATGTTTTTGTTTAATGTGTGTT
GTTTTTGTTTTTCCAGCAGACCAACTAGCGAATTGGTGACCGCGTACTGC
TGGGCCACGATCGGTTAACGCGAAGAACACACTCACACACTCACACACAC
GGTCGAAGTGGTTAATAAGCAGCAACATCAGTCAATCCTCCCATCCGCCA
CCGCCTTCTGCTCTTGTGTGCCTTTGATGCAGGTGTCGCATGTGGGCCCG
CCGAGACCTCTCCCCGCAGCCGCGTACGACCTTCAAACCGCGCTGGAATC
CGTGCAGCACTTCGCCACGCAGACGCTCTCCGGCGTTGTTCAGGTAGAAG
CGGTGCGAAAAACGGCTCAAGAGTTTTTCGCTGGTACGCTCTCTCTCTCT
CCTACTAGCATCCCCATGGGAGGCGGCCAGAGAGGCGGCCAGAGAGCGGC
TAAGGAGGCGAGGGAGGCAGCCACGGCCGCGGCTGGTCTTCGGGAAGGGT
GGGAGCTATGGTGGCCCCCGCGAGAGCTGACAGAGGCCCTAGCCCTGGTG
ACGGCTAGGCAGATGGCGAACGCGATGCGCTGCGACGCGGAGCCCTTGAT
CCAGGTGGATTATATACTCTACTAGACCATGTTGTTGTTGTTGTTGGTGG
TGGTCACACATTTAGCAGAAGATCAACCGGATTTGGTTGCCTTCTGCTCG
TCTCGTGGTCACTTGAACAGGGAAGATAATTTTCCCCTGTCCTAGCGCAC
TTCACTTCGAAGGATAATATATTATACGAAGTATTTACTAGTAGATTAGA
GTAGACTAGGTCAGTATATTCTATTGGAGTGCGAAGGAGGTGGCTCCCCC
TTACGTGTCTTGCCGGTTTGCGCGGTTTAATGCAAAATTGATAAAAAGGC
AAAATTACATGGCTCTTTACAGTACAGTAGTATTGTAATACAGTATGAAA
AACAAAAATGACCGGTCGGACTCCAATTTTCGTGACGTCACGTGCGCTTT
TTAAATTTAGCAACGAACGCCTCCCTCAGCTTTGCCCTTTAAAAATAAAT
AAATGTGCCGGTACTAGATATTATTTGTATTTCAAAAATGAATTTTCTCA
ACGCCCCAGATGGTTCCCTTCTCATTGTATATTGTATATAGTATATAATA
TATAGTATATAGTATATAGTGTATAGTATATAATATATAGTGTATAGTGT
ATTGGTATTGGAGTCTAGTGTAGTGCCGTTTGTAAAGTATGAGTGTATAT
ATATTGTTCGCTCTGAGCAGTCCAGCACGGTCCGTCCTTTTCGTTGATAA
TGGTGGGTCATTGCCGTCCACCGCTCCATTTGTCTGTGGCTGTATCGGTC
ATGCCCACTATACTATACCAATAGTGGGTGTGGGAAAAGAGAGGCGCACA
GTAATTGGTCCATGGGGTTACCTGAATAGGCTTCACCCGTTACTCAAGCT
TCTTTGAGGACTATTGGCTCAGTGTCGGCAGACTCTCGGTGGTGAACACC
ATTGGTACGCAATTGCGTGATCTGATAAACTTGGGAATGGCCCGATGACG
GTTGACGGTAGAGATGGACGCCGTCGCGGAAAACGAGAGGATCCCGGGAG
TAAGCACCAGATTCAGTCTGGGTTCAGAAAAATGAGCAGGCTGACGCGGG
ACGGGACTGACGAACCCGTCTCGCCAGGCCAAATTCTCAGGCGCGGGCGG
GGACAGCGAAAACATTATTTTCCCTGTTCAGCTGACCACAAGCATGAGGC
AACAAAATTCGGTTGATCTTACTCTGTTATATGTGATACCACACAATGTC
AACATTGTAGACTAATATAGAACAATGCTTTGATCTTCGCGATCCCCTTG
GATGGATTGATGGGCAGATCTGGATGCGTTGCTTCACTCCCTTGGAAGTC
AGACACCGAGAGAGGCTCTGGGGGGCACTTGCTCCGTCCCCCCTGGACAG
CGAACACGTTTACCAGGGGAGATGGCACAGGCAGCTGGTGTGCGGCCTAG
TGACGCTCTTTGCCCAGGTA
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Coding sequence (CDS) from alignment at H-elongata_contig14009:435..8104-

>mRNA_H-elongata_contig14009.2792.1 ID=mRNA_H-elongata_contig14009.2792.1|Name=mRNA_H-elongata_contig14009.2792.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=4320bp|location=Sequence derived from alignment at H-elongata_contig14009:435..8104- (Himanthalia elongata Himel1 dioecious)
ATGATGTTTGTGGCCGGGATGATGGGAATCAAGCGCCAGAGCTTGGGCAA
GCTCCGATGATGTTTGTGGCCGGGATGATGGGAATCAAGCGCCAGAGCTT
GGGCAAGCTCCGGTCTCGCCGCGAGGCAAGAGTGAGCGCAACCCCCGCGG
TGGTGATGGATCTTCCTCCGTCCGCCATGGAGGACCCCACCCCCTTCGTG
CCGCCCAGCCAATACCAGGTCTCGCCGCGAGGCAAGAGTGAGCGCAACCC
CCGCGGTGGTGATGGATCTTCCTCCGTCCGCCATGGAGGACCCCACCCCC
TTCGTGCCGCCCAGCCAATACCAGGTCCGCCTGAACGTGTCGAGGGGCCT
GGGGCTATCCCTCAATATCACCGGCAACGATGTGCGAGTCAAGGGTTTCT
CTCCCGTGGAAGACGGGGAGATTGGACCCGCGGAGGCGTGCGGAAAGATA
CAGGCAATTAAAAAATGGCGCACGAAGAGCCTAATTGTCCGCCTGAACGT
GTCGAGGGGCCTGGGGCTATCCCTCAATATCACCGGCAACGATGTGCGAG
TCAAGGGTTTCTCTCCCGTGGAAGACGGGGAGATTGGACCCGCGGAGGCG
TGCGGAAAGATACAGGCAATTAAAAAATGGCGCACGAAGAGCCTAATTGT
CGGTGATGCTCTGGTGCGCGTCAACCATGAACAGTTGACTCTCCTCAACC
ACGAACTCGCGGTAAGCGTTCTCAGGCGCGTCGTCGAGACCGGCGCCGAC
CAGCTCGTCCTCATGCACTTCGAGTACGCCGAGAACTCATCTGAGTCTGC
GCCAGGAAGCTCGCTCCCAATCAACCCCGCGACGAGGACACGCCTCTACT
CCTCGGAATCCTTGACGGCATCCTACGAACGGCTGTCTCTTCAGGCGAAA
ATGGTGAATGTCAACCGAGGCGACGTGTTTCGATCAGAGTCGTGGCACGG
TCGGTGATGCTCTGGTGCGCGTCAACCATGAACAGTTGACTCTCCTCAAC
CACGAACTCGCGGTAAGCGTTCTCAGGCGCGTCGTCGAGACCGGCGCCGA
CCAGCTCGTCCTCATGCACTTCGAGTACGCCGAGAACTCATCTGAGTCTG
CGCCAGGAAGCTCGCTCCCAATCAACCCCGCGACGAGGACACGCCTCTAC
TCCTCGGAATCCTTGACGGCATCCTACGAACGGCTGTCTCTTCAGGCGAA
AATGGTGAATGTCAACCGAGGCGACGTGTTTCGATCAGAGTCGTGGCACG
CGGATGACTCGCCGACGTTGGCTTCCGAAATGGGTGGGGTGGGCGTGGAT
CAGGGTGGTAGTTGGAGCGACACGCGCAGGCAGACGTTGGTAGCGACGGC
CGCTTCTCAGGGGCTTGGGCTTGACGCCCGGAATGTTGAAGTAGGTGGTG
CCGTAGGAAGAGCAGGCGCGTTTAGCGAAGCGATAGAGTTGAAGGGACGG
AACAAGGGTCTGGGAAGGTTGTGGGGAGAATCGGACGCGGGAATCGGCAG
CGTCGGAGAGGGCAGCGGGCATGTCTATCTGGGAGACATGGGGTTGGCGC
AGGCCCAGAGGACGCTGAGAAACATCGCTCAAGACGTCCAGCGGATGACT
CGCCGACGTTGGCTTCCGAAATGGGTGGGGTGGGCGTGGATCAGGGTGGT
AGTTGGAGCGACACGCGCAGGCAGACGTTGGTAGCGACGGCCGCTTCTCA
GGGGCTTGGGCTTGACGCCCGGAATGTTGAAGTAGGTGGTGCCGTAGGAA
GAGCAGGCGCGTTTAGCGAAGCGATAGAGTTGAAGGGACGGAACAAGGGT
CTGGGAAGGTTGTGGGGAGAATCGGACGCGGGAATCGGCAGCGTCGGAGA
GGGCAGCGGGCATGTCTATCTGGGAGACATGGGGTTGGCGCAGGCCCAGA
GGACGCTGAGAAACATCGCTCAAGACGTCCAGTCGCCCCCCCCACTACCG
AAGGAGCTGTATAGGGGGCGTCACCGTCGTCGTCCTCGCCGCCGTCGATA
CACCCTCGCCCTCCGCCACCCGGGGATGGTCAGTAACCACGGAGAATTTG
GCTCACGGGGTGGGTGTGGGGGTATCGGTGGAGGACCAGGGGCGACGAGG
CGATCGATCGATCTCCTTGTCTGCCACGAGGTTGTCCGGGGAGAGCTACG
ACAGTTGGAGAGTGAGCTGGAGCGGCAGACAGCGATGGTGGCGAGACGGA
ATCGATGTCGCCCCCCCCACTACCGAAGGAGCTGTATAGGGGGCGTCACC
GTCGTCGTCCTCGCCGCCGTCGATACACCCTCGCCCTCCGCCACCCGGGG
ATGGTCAGTAACCACGGAGAATTTGGCTCACGGGGTGGGTGTGGGGGTAT
CGGTGGAGGACCAGGGGCGACGAGGCGATCGATCGATCTCCTTGTCTGCC
ACGAGGTTGTCCGGGGAGAGCTACGACAGTTGGAGAGTGAGCTGGAGCGG
CAGACAGCGATGGTGGCGAGACGGAATCGATGGTCATCCGTACGCGGAAT
GGTGGGGAAGATCGTGTGCAGCTCCAACCAACCGGTTGTTCCATGCCGCG
CACCGCTTTCATGGCTCTCACCCGCGGCGGCCTCCCCCGACATTGGTAAT
ACTAGTAACACAAAGAAGGGAGGAAACGCCTCCTTGAGATCGCGGTACGT
GTCGGCGATCGACGTTGCGGACAGCGACTTGAGCGATTTTCTCAGCGACG
GCGACCCCTCATCAGCCTTCCCAGGTACGAATTCGGGGAGGGGAAGGCGA
AACGTTTCCGGTGAAGGTGTCGCGAAGCTGCTCGATGAAGAGATGAACGC
CGCCTGCGACATTTTTTTGGAGGCCGTCTCGACCGCGGGCATGGAAAACG
AGCTCCTGCAAACCCTTGCTCTCGAGGTCATCCGTACGCGGAATGGTGGG
GAAGATCGTGTGCAGCTCCAACCAACCGGTTGTTCCATGCCGCGCACCGC
TTTCATGGCTCTCACCCGCGGCGGCCTCCCCCGACATTGGTAATACTAGT
AACACAAAGAAGGGAGGAAACGCCTCCTTGAGATCGCGGTACGTGTCGGC
GATCGACGTTGCGGACAGCGACTTGAGCGATTTTCTCAGCGACGGCGACC
CCTCATCAGCCTTCCCAGGTACGAATTCGGGGAGGGGAAGGCGAAACGTT
TCCGGTGAAGGTGTCGCGAAGCTGCTCGATGAAGAGATGAACGCCGCCTG
CGACATTTTTTTGGAGGCCGTCTCGACCGCGGGCATGGAAAACGAGCTCC
TGCAAACCCTTGCTCTCGAGGTGTCGCATGTGGGCCCGCCGAGACCTCTC
CCCGCAGCCGCGTACGACCTTCAAACCGCGCTGGAATCCGTGCAGCACTT
CGCCACGCAGACGCTCTCCGGCGTTGTTCAGGTAGAAGCGGTGCGAAAAA
CGGCTCAAGAGTTTTTCGCTGGTACGCTCTCTCTCTCTCCTACTAGCATC
CCCATGGGAGGCGGCCAGAGAGGCGGCCAGAGAGCGGCTAAGGAGGCGAG
GGAGGCAGCCACGGCCGCGGCTGGTCTTCGGGAAGGGTGGGAGCTATGGT
GGCCCCCGCGAGAGCTGACAGAGGCCCTAGCCCTGGTGACGGCTAGGCAG
ATGGCGAACGCGATGCGCTGCGACGCGGAGCCCTTGATCCAGGTGTCGCA
TGTGGGCCCGCCGAGACCTCTCCCCGCAGCCGCGTACGACCTTCAAACCG
CGCTGGAATCCGTGCAGCACTTCGCCACGCAGACGCTCTCCGGCGTTGTT
CAGGTAGAAGCGGTGCGAAAAACGGCTCAAGAGTTTTTCGCTGGTACGCT
CTCTCTCTCTCCTACTAGCATCCCCATGGGAGGCGGCCAGAGAGGCGGCC
AGAGAGCGGCTAAGGAGGCGAGGGAGGCAGCCACGGCCGCGGCTGGTCTT
CGGGAAGGGTGGGAGCTATGGTGGCCCCCGCGAGAGCTGACAGAGGCCCT
AGCCCTGGTGACGGCTAGGCAGATGGCGAACGCGATGCGCTGCGACGCGG
AGCCCTTGATCCAGATCTGGATGCGTTGCTTCACTCCCTTGGAAGTCAGA
CACCGAGAGAGGCTCTGGGGGGCACTTGCTCCGTCCCCCCTGGACAGCGA
ACACGTTTACCAGGGGAGATGGCACAGGCAGCTGGTGTGCGGCCTAGTGA
CGCTCTTTGCCCAGGTAATCTGGATGCGTTGCTTCACTCCCTTGGAAGTC
AGACACCGAGAGAGGCTCTGGGGGGCACTTGCTCCGTCCCCCCTGGACAG
CGAACACGTTTACCAGGGGAGATGGCACAGGCAGCTGGTGTGCGGCCTAG
TGACGCTCTTTGCCCAGGTA
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