prot_H-elongata_contig13986.2776.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig13986.2776.1
Unique Nameprot_H-elongata_contig13986.2776.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length719
Homology
BLAST of mRNA_H-elongata_contig13986.2776.1 vs. uniprot
Match: A0A6H5L5W5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5W5_9PHAE)

HSP 1 Score: 355 bits (912), Expect = 9.300e-110
Identity = 256/661 (38.73%), Postives = 340/661 (51.44%), Query Frame = 0
Query:  136 MRVKQGFKCRIYATPECRSKEISGAKVNDVLAMGTVVTLYTDWGDALEDHPLRRDGKGGKVLRVIEPQDGFVERRLLEDVQEVGNNTDAPVAAMVRPRK------FTGEEMMSIIRSAVTISPIIQATLRSGVYFEGVKDVHDYVDVHRAALRAAATLMRKDPTSREDVLACGGIGLFSFIVKKFCK-DLLVCEYGCWAFSVFAGEGGTVEHD--FRFQAAALKAEVMVAVATAVDAHRESALLRRQASIIVRQHCLGALAAMIEGNTSVAAELVSLNLHVTVAEDSICRWPSDAELSCLSCWVLLAAIRGHTRMSWSSTVERE-------YTGVQGEEDEL--GIYRVSSHENMLATGGVVYPGEDGAQA-------GNPDCGRAREIGGVDWGQDDRVVVDSVFRECPGADDKRAVGGMTTGGAFRTGLDETSDILLESLGDSYDHERKIMREETGSTERDKTSTILEFQARGQTEQPIPPPKHRNASIRRIQGRSFGAAFPKSGNQIVP------DLGCEKDAQGLHVGKDS---------------------------------TFFGGEQDVNVLERLLKLAEATK---------------VVNYDNEDTRKAASGLVQALAERLQDNQSSSEKLEWREARDRVDRLLREGESMGA 717
            M+VKQGFKC++Y TP CR  E+      DVL MGT+VTL TDWG A+E HP R     GKVL ++EPQ+GF+ERR LED+Q  G + DA  A +  P         T EE M I+R A  +S ++++TLR G YFEG   VH +V+VHRAALRAAATLMRKDP SRE +L C GI LF  IV KFC+ D ++CEYGCWA +VFAGEG +      FRFQ A ++A  + AV  AVDAHR+SA LRR        + + ALAA++  N S A +L SLNLH TVAEDSI RWP+D ELSCL+CWVL + +   +R+     +E           G+ G+   +    +R+          G   P E+  ++       G  +   +  +G  D  +D     D               G   +G  F  G +ETSD+L+ SL D  D     + + T +T R  +S +      GQ     P      A+       +  AA    G + VP      D   EK    +H G+ +                                   F GE+D +VLERLLKLAEATK               V+N+DNEDTRKAAS LV A+  ++      S +   R ++ RV R+LREG+++GA
Sbjct:    1 MKVKQGFKCKVYKTPACRPDEVV-----DVLPMGTIVTLSTDWGGAMEKHPQRGKSGKGKVLWMVEPQEGFLERRPLEDLQPKGGD-DAVEAEVAAPSPHAAAVALTPEERMGIVRGATKMSELLRSTLRRGAYFEGAAGVHCFVEVHRAALRAAATLMRKDPASRERLLECRGIELFIQIVNKFCEEDRVLCEYGCWALAVFAGEGDSDSDPSVFRFQEAVVEAGGLAAVGYAVDAHRDSAQLRR--------YGVSALAAIVHENASTAGQLHSLNLHATVAEDSIRRWPNDPELSCLACWVLRSVVEPPSRLPRQGDLELGGKGDVVLLGGISGDGGSVVGSKFRMRRKSVEEVEVGSAMPAENSGESSLQKRNGGGSEGNSSLALGSGDDPRDQLGDADETGXXXXXXXXVFMEGSTMSGSVFGMGDNETSDLLI-SLADDDD-----VDDATTATGRKPSSPL------GQAGSVSPAASTITAAAPVSGVTASSAAKKHQGLEGVPVNEGRRDAPMEKLGGEVHAGQSTISSESPRGGASIGGGTKEAGEGRVAVQVGVVMAAAFKGEEDGDVLERLLKLAEATKGRVTTRRNEIRFARKVLNHDNEDTRKAASRLVGAILRQIDSTYVRSSRRRRRASQARVARVLREGQAIGA 635          
BLAST of mRNA_H-elongata_contig13986.2776.1 vs. uniprot
Match: D7G2D6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2D6_ECTSI)

HSP 1 Score: 328 bits (842), Expect = 6.830e-100
Identity = 238/623 (38.20%), Postives = 312/623 (50.08%), Query Frame = 0
Query:  160 AKVNDVLAMGTVVTLYTDWGDALEDHPLRRDGKGGKVLRVIEPQDGFVERRLLEDVQ-EVGNNTD-APVAAM---VRPRKFTGEEMMSIIRSAVTISPIIQATLRSGVYFEGVKDVHDYVDVHRAALRAAATLMRKDPTSREDVLACGGIGLFSFIVKKFCK-DLLVCEYGCWAFSVFAGEGGTVEHD----FRFQAAALKAEVMVAVATAVDAHRESALLRRQASIIVRQHCLGALAAMIEGNTSVAAELVSLNLHVTVAEDSICRWPSDAELSCLSCWVLLAAIRGHTRMSWSSTVERE-------YTGVQG-----------------EEDELG--IYRVSSHENMLATGGVVYPGEDGAQAGNPD-----CGRAREIGGVDWGQDDRVVVDSVFRECPGADDKRAVGGMTTGGAFRTGLDETSDILLESLGDSYDHERKIMREETGSTERDKTSTILEFQARGQTEQPIPPP-------KHRNASIRRIQGRSFGAAFPKSGNQIVPDLGCEKDAQGLHVGKDS-----------------TFFGGEQDVNVLERLLKLAEATKVVNYDNEDTRKAASGLVQALAERLQDNQSSSEKLEWREARDRVDRLLREGESMGA 717
            ++V DVL MGT+VTL TDWG+ +E HP R     GKVL ++EPQ+GF+ERR LED+    G+  D A VAA      P   T EE M I+R A  +S ++++TLR G YFEG   VH +++VHRAALRAAATLMRKDP SRE +L C GI LF  IV KFC+ D L+CEYGCWA +VFAGEG          FRFQ A ++A  + AV  AVDAH +SA LRR          + ALAA++  N S A +L SLNL  TVAEDSI RWP+D ELSCL+CWVL + +   +R+      E         + G+ G                 EE E+G  +   S   ++    G    G++    G+ D      G A E GG   G         VF E          G   +G  F  G +ETSD+L+    D                      ++           P+          KHR      +    + A   + G      +  E    G  +G  +                   F GE+D  VLERLLKLAEATKV+N+DNEDTRKAAS LV+A+  ++      S +   R ++ RV R+LREG+++GA
Sbjct:    2 SQVVDVLPMGTIVTLSTDWGEVMEKHPQRGKNGKGKVLWMVEPQEGFLERRPLEDLPANRGDEADEAEVAAPPPHAAPVSLTPEERMGIVRGATKMSELLRSTLRRGAYFEGAAGVHSFLEVHRAALRAAATLMRKDPASREGLLECRGIELFVLIVSKFCEEDRLLCEYGCWALAVFAGEGXXXXXXXPSVFRFQEAVVEAGGLAAVGCAVDAHPDSAQLRRCG--------VSALAAIVHDNASTAGQLHSLNLQATVAEDSIRRWPNDPELSCLACWVLRSVVEPPSRLPRQGDPELRGKGDVVLHGGIGGDGGSVVGSKFRLRRKSVEEVEVGSAMPENSGESSLQKRNGGGLEGDNSLALGSGDDPRDQSGDANETGGCGGG---------VFME----------GSTMSGSVFGMGDNETSDLLISLADDDDIDXXXXXXXXXXXXXXXXXXSVSPAXXXXXXXXPVSAVTASSTSNKHRGLEGVPVNEGRWDAPMEQLGRAGQSTISSESLRAGEPIGSGTREAGEGRVAGQAGVVMAAAFEGEEDGEVLERLLKLAEATKVLNHDNEDTRKAASRLVEAILRQIDSTYVRSSRRRRRASQARVARVLREGQAIGA 597          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig13986.2776.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L5W5_9PHAE9.300e-11038.73Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G2D6_ECTSI6.830e-10038.20Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 272..405

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig13986contigH-elongata_contig13986:2172..8167 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig13986.2776.1mRNA_H-elongata_contig13986.2776.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig13986 2172..8167 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig13986.2776.1 ID=prot_H-elongata_contig13986.2776.1|Name=mRNA_H-elongata_contig13986.2776.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=719bp
KVKIPVRVHFSHSQSGWTEFLNRVMRELELEDIDGIYEEMDGAPIARISS
LVDGGLYFARPTEVCAMLRSLVRTEPESNPAWPRVEEGLEAKRELERCCA
YFKESSNNIFQASDGRTCALVEAIPEKDKEAVFWKMRVKQGFKCRIYATP
ECRSKEISGAKVNDVLAMGTVVTLYTDWGDALEDHPLRRDGKGGKVLRVI
EPQDGFVERRLLEDVQEVGNNTDAPVAAMVRPRKFTGEEMMSIIRSAVTI
SPIIQATLRSGVYFEGVKDVHDYVDVHRAALRAAATLMRKDPTSREDVLA
CGGIGLFSFIVKKFCKDLLVCEYGCWAFSVFAGEGGTVEHDFRFQAAALK
AEVMVAVATAVDAHRESALLRRQASIIVRQHCLGALAAMIEGNTSVAAEL
VSLNLHVTVAEDSICRWPSDAELSCLSCWVLLAAIRGHTRMSWSSTVERE
YTGVQGEEDELGIYRVSSHENMLATGGVVYPGEDGAQAGNPDCGRAREIG
GVDWGQDDRVVVDSVFRECPGADDKRAVGGMTTGGAFRTGLDETSDILLE
SLGDSYDHERKIMREETGSTERDKTSTILEFQARGQTEQPIPPPKHRNAS
IRRIQGRSFGAAFPKSGNQIVPDLGCEKDAQGLHVGKDSTFFGGEQDVNV
LERLLKLAEATKVVNYDNEDTRKAASGLVQALAERLQDNQSSSEKLEWRE
ARDRVDRLLREGESMGAS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR016024ARM-type_fold